Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_M14
         (790 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92830-15|CAN86918.1|  366|Caenorhabditis elegans Hypothetical p...    29   5.0  
Z92830-14|CAB07352.1|  363|Caenorhabditis elegans Hypothetical p...    29   5.0  
Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z36753-13|CAA85331.1|  598|Caenorhabditis elegans Hypothetical p...    29   5.0  
Z70203-1|CAA94104.1|  456|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>Z92830-15|CAN86918.1|  366|Caenorhabditis elegans Hypothetical
           protein F11A5.5b protein.
          Length = 366

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 429 FQEPSILVEFEDHYIELVVHRYKYW 503
           F +PS+L  +ED Y+ L    Y+ W
Sbjct: 156 FDDPSLLDNYEDEYLHLTGTHYQSW 180


>Z92830-14|CAB07352.1|  363|Caenorhabditis elegans Hypothetical
           protein F11A5.5a protein.
          Length = 363

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 429 FQEPSILVEFEDHYIELVVHRYKYW 503
           F +PS+L  +ED Y+ L    Y+ W
Sbjct: 153 FDDPSLLDNYEDEYLHLTGTHYQSW 177


>Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical protein
            F29D11.2 protein.
          Length = 1153

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 675  SYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSR 577
            S TNKR   L + DI+++N   +  + KP  SR
Sbjct: 1049 SKTNKRNANLISTDIAVDNDVNMEEDDKPGPSR 1081


>Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical protein
            F29D11.2 protein.
          Length = 1153

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 675  SYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSR 577
            S TNKR   L + DI+++N   +  + KP  SR
Sbjct: 1049 SKTNKRNANLISTDIAVDNDVNMEEDDKPGPSR 1081


>Z36753-13|CAA85331.1|  598|Caenorhabditis elegans Hypothetical
           protein T09A5.2a protein.
          Length = 598

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = -2

Query: 663 KRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNH 565
           ++  QLHN+ + LN + ++ + I+P L+  T++
Sbjct: 230 EKRKQLHNQLVELNGNIRVFYRIRPQLASETDN 262


>Z70203-1|CAA94104.1|  456|Caenorhabditis elegans Hypothetical
           protein C05G5.1 protein.
          Length = 456

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/60 (23%), Positives = 29/60 (48%)
 Frame = -1

Query: 340 LLLFFPQSVKLIYNVTSAICIGRNTLKSMHQLAIRRVIEGSTANHAPATWKEFHNCCLLC 161
           L++   Q   + Y + + + +G+      H +AI+  ++ ++ NH   TWK      L+C
Sbjct: 368 LIIMIGQVQGVFYVIMTNLAVGK---PDPHDMAIQTCVDTNSQNHTVLTWKWPFLIWLIC 424


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,965,911
Number of Sequences: 27780
Number of extensions: 258279
Number of successful extensions: 686
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)