Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_M12
         (785 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    27   0.15 
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    24   1.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   3.2  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   7.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   9.8  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = -3

Query: 531 VSPKEEIERMVNEAEKYRNED--DKQKET-IQAQECIGILLLQHEVYH 397
           + P+ ++E ++ EA+  +N D  DK K+  +    C+  +LL+  +YH
Sbjct: 576 ILPEVDVEEILGEAKVLQNFDIKDKNKKVNVAGCRCVKGILLKSGLYH 623


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -1

Query: 548 YQRQRSSLPRKRSSVWLMRQRSTETRMTSKRRPSR 444
           Y RQ S   ++R  +  MR+R  E R  S R  S+
Sbjct: 55  YHRQHSKNEQQRKEMEQMREREREQREHSDRVTSQ 89


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 767 TXITNPEYSSKYLR 726
           T I N  YSSKY+R
Sbjct: 199 TYIVNTNYSSKYMR 212


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 548 YQRQRSSLPRKRSSVW 501
           YQR  S + RK+SS W
Sbjct: 119 YQRNPSVVGRKKSSGW 134


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -1

Query: 407 KSTMEDEKLKEKISDSDKQTILDKCN 330
           + +++ EK+K  +S    +T+  KCN
Sbjct: 331 RCSVKREKIKISVSYPSTETLNTKCN 356


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,258
Number of Sequences: 438
Number of extensions: 3924
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)