Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_M11
(779 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 39 7e-04
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 33 0.046
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 32 0.11
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.43
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.99
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 1.7
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 1.7
SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|c... 27 3.0
SPAC3A12.03c |mug145||ubiquitin-protein ligase E3 |Schizosacchar... 27 3.0
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual 27 3.0
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 26 7.0
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 39.1 bits (87), Expect = 7e-04
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = +2
Query: 197 SHYLSASSTTISTGLCPTNTFLRISSQYSFSSVKLSSSGCPKC----CSKVSFKCRVGSR 364
S+++++SS+T S+ +++ SS S SS K SSS S S K S
Sbjct: 144 SYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSS 203
Query: 365 HWSRTLGSRSSSRVQSKFRKCSLVASRPPLSCSA 466
S++ S SSS+ SKF S + S P S S+
Sbjct: 204 SSSKSSASPSSSKSSSKFSSSSFITSTTPASSSS 237
Score = 29.9 bits (64), Expect = 0.43
Identities = 31/94 (32%), Positives = 37/94 (39%), Gaps = 7/94 (7%)
Frame = +2
Query: 206 LSASSTTISTGLCPTNTFLRISSQYSF-------SSVKLSSSGCPKCCSKVSFKCRVGSR 364
LS S T ST + P+ R SS Y SS SSS P S S S
Sbjct: 121 LSYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSS 180
Query: 365 HWSRTLGSRSSSRVQSKFRKCSLVASRPPLSCSA 466
S + S SSS SK S +S+ S S+
Sbjct: 181 SSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSS 214
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 33.1 bits (72), Expect = 0.046
Identities = 27/70 (38%), Positives = 35/70 (50%)
Frame = +2
Query: 185 H*DPSHYLSASSTTISTGLCPTNTFLRISSQYSFSSVKLSSSGCPKCCSKVSFKCRVGSR 364
H SH S SS+ +T PTNT S+ + S+ SSSG P +K S ++GS
Sbjct: 3722 HNTVSHATSTSSS-FTTSHLPTNTLA--STFDNSQSIFSSSSGVPGLSTKSSSLGKIGSS 3778
Query: 365 HWSRTLGSRS 394
S TL S S
Sbjct: 3779 SISLTLSSSS 3788
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 31.9 bits (69), Expect = 0.11
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Frame = +2
Query: 197 SHYLSASSTTISTGLCPTNTFLRISSQYSFSSVKLSSSGCPKCCSKVSFKCRVGSRHWSR 376
S L++SST +T PT++ L SS S S S++ S ++ S S
Sbjct: 88 SSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSS 147
Query: 377 TLGSRS--SSRVQSKFRKCSLVASRPPLSCSAMVLTTLCWMNCSLXSLYWLARYLMRKAA 550
+L S S SS + S S ++ P S ++ L++ N + S LA +
Sbjct: 148 SLASSSTTSSSLASSSTN-STTSATPTSSATSSSLSSTAASNSATSSS--LASSSLNSTT 204
Query: 551 LVLAEGSSCASAA 589
A SS +S A
Sbjct: 205 SATATSSSLSSTA 217
Score = 25.8 bits (54), Expect = 7.0
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +2
Query: 197 SHYLSASSTTISTGLCPTNTFLRISSQYSFSSVKLSSSGCPKCCSKVSFKCRVGSRHWSR 376
S L++SST +T PT++ ++ S SS S+S + S + S
Sbjct: 156 SSSLASSSTNSTTSATPTSS----ATSSSLSSTAASNSATSSSLASSSLNSTTSATATSS 211
Query: 377 TLGS--RSSSRVQSKFRKCSLVASRPPLSCSAMVLTTL 484
+L S S+S S SL ++ + S+ + +T+
Sbjct: 212 SLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTV 249
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.9 bits (64), Expect = 0.43
Identities = 32/106 (30%), Positives = 47/106 (44%)
Frame = +2
Query: 194 PSHYLSASSTTISTGLCPTNTFLRISSQYSFSSVKLSSSGCPKCCSKVSFKCRVGSRHWS 373
P+ S S++ S+ PT+T ISS S SS S+ S SF S S
Sbjct: 283 PTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSS--S 340
Query: 374 RTLGSRSSSRVQSKFRKCSLVASRPPLSCSAMVLTTLCWMNCSLXS 511
T+ S SSS S F + +S+ S S+ V ++ + +L S
Sbjct: 341 STISSSSSSPSSSSF-SSTTSSSKSSSSFSSTVSSSSSTSSSTLTS 385
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 28.7 bits (61), Expect = 0.99
Identities = 26/85 (30%), Positives = 39/85 (45%)
Frame = +2
Query: 167 NISEHFH*DPSHYLSASSTTISTGLCPTNTFLRISSQYSFSSVKLSSSGCPKCCSKVSFK 346
NI E S S+SS+ +S+ +++ ++ S SS SSS K S S
Sbjct: 109 NIVEGAASSSSSSSSSSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSS-- 166
Query: 347 CRVGSRHWSRTLGSRSSSRVQSKFR 421
+ SR SRT R++S S +R
Sbjct: 167 -KSSSRSSSRTTSHRTTSHKSSSYR 190
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.9 bits (59), Expect = 1.7
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = +2
Query: 209 SASSTTISTGLCPTNTFLRISSQYSFSSVKLSSSGCPKCCSKVSFKCRVGSRHWSRTLGS 388
S+SS++ S+ +++ SS S SS SSS S V S H S + S
Sbjct: 166 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSS 225
Query: 389 RSSS 400
SSS
Sbjct: 226 SSSS 229
Score = 27.1 bits (57), Expect = 3.0
Identities = 24/66 (36%), Positives = 30/66 (45%)
Frame = +2
Query: 209 SASSTTISTGLCPTNTFLRISSQYSFSSVKLSSSGCPKCCSKVSFKCRVGSRHWSRTLGS 388
S+SSTT +T P+++ SS S SS SSS S S S S + S
Sbjct: 145 SSSSTTTTTS--PSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 202
Query: 389 RSSSRV 406
SSS V
Sbjct: 203 SSSSSV 208
Score = 26.6 bits (56), Expect = 4.0
Identities = 26/90 (28%), Positives = 35/90 (38%)
Frame = +2
Query: 209 SASSTTISTGLCPTNTFLRISSQYSFSSVKLSSSGCPKCCSKVSFKCRVGSRHWSRTLGS 388
S SS++ S+ +++ SS S SS SSS S S S S
Sbjct: 154 SPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSS 213
Query: 389 RSSSRVQSKFRKCSLVASRPPLSCSAMVLT 478
SSS S S +S P S S+ + T
Sbjct: 214 TSSSHSSSSSSSSSSSSSSRPSSSSSFITT 243
Score = 26.2 bits (55), Expect = 5.3
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
Frame = +2
Query: 194 PSHYLSASSTTISTGLCPTNTFLRISSQYSFSSVKLSSSGCPKCCSKVSFKCRV---GSR 364
PS S+SS++ S+ +++ SS S SS SSS S S V S
Sbjct: 155 PSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSST 214
Query: 365 HWSRTLGSRSSSRVQSKFRKCSLVASRPPLSCSAMVLT 478
S + S SSS S R S + +S S + T
Sbjct: 215 SSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFIST 252
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.9 bits (59), Expect = 1.7
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +2
Query: 197 SHYLSASSTTI--STGLCPTNTFLRISSQYSFSSVKLSSSGCPKCCSKVSFKCRVGSRHW 370
S +S+ T++ S+ PT++ SS + S +SSS P S VS +
Sbjct: 528 SSIISSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSSTSSP 587
Query: 371 SRTLGSRSSSRVQSKFRKCSLVASRPPLSCSAMVLTTL 484
S T S SSS S F S +S +S S +T+
Sbjct: 588 SSTSLSISSSSTSSTFSSAS-TSSPSSISSSISSSSTI 624
>SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 579
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 705 QSEQGEALVKCLYALSCGCREYSPACRSLV 616
++E+ E +KCL L YSP R+L+
Sbjct: 93 ETEKSECFIKCLLLLILSLGNYSPYSRNLL 122
>SPAC3A12.03c |mug145||ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 293 RKKRSIVKRSSGRCLSGISQWRSWLKKPIDSARG 192
R++RS+V + + C+S + WLKK A+G
Sbjct: 97 RRRRSVVSKEALSCISLEIPYIKWLKKRKGHAKG 130
>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 539 RKAALVLAEGSSCASAAPNAPHPPRDTS 622
RK V +EG S A+A NA H P T+
Sbjct: 114 RKIRCVYSEGPSTANAHANAHHQPAQTT 141
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -3
Query: 372 DQCRDPTLHLKETLEQHLGHPELESFTEEKEY 277
D RD +L + L H HPE E KEY
Sbjct: 106 DLIRDYVDYLLDKLSFHAQHPEFNGTFEYKEY 137
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,664,517
Number of Sequences: 5004
Number of extensions: 51515
Number of successful extensions: 197
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -