BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_M07
(746 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0276 + 15691909-15691968,15692070-15692132,15692246-156923... 66 4e-11
08_02_1347 - 26300295-26300483,26300598-26300657,26300850-263009... 57 1e-08
11_06_0020 - 19304740-19304790,19304869-19304973,19305063-193051... 38 0.011
08_02_0766 - 20993207-20993307,20993510-20993612,20993686-209937... 36 0.026
07_03_1228 - 25009736-25010965 33 0.32
06_01_0283 + 2083627-2084334,2085759-2085986 32 0.42
06_03_0500 + 21470681-21470952,21471049-21471089,21472322-214724... 31 0.74
06_03_1085 + 27491735-27492754,27492854-27492978,27493088-274932... 31 0.97
07_01_0513 + 3828196-3828309,3828408-3828722,3828823-3828879,382... 31 1.3
06_03_1500 + 30602846-30603185,30603244-30603323,30603477-306035... 30 1.7
03_06_0135 + 31928838-31929698,31929783-31929932,31930795-319310... 30 1.7
03_05_0175 + 21513767-21513903,21534361-21535385,21537375-215375... 30 1.7
12_02_1113 - 26165074-26165889,26166077-26166202,26166294-261664... 30 2.2
01_06_1577 - 38379951-38380167,38380349-38380543,38380919-383811... 30 2.2
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 29 3.0
12_01_0926 + 9178804-9180324,9180612-9181157 29 3.9
05_03_0008 + 7332224-7332700,7335136-7335153,7335747-7335848,733... 29 3.9
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 28 6.9
01_06_0561 + 30251547-30252173,30252248-30252405,30253250-302541... 28 6.9
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 28 9.1
07_03_0067 + 13018729-13019187,13019197-13019901 28 9.1
05_04_0131 + 18290201-18290650,18291474-18291626,18291950-182920... 28 9.1
04_03_0213 + 12709396-12709564,12709659-12710217,12710312-127106... 28 9.1
02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,850... 28 9.1
02_01_0073 - 509377-509425,510200-510270,510420-510539,510684-51... 28 9.1
>11_04_0276 +
15691909-15691968,15692070-15692132,15692246-15692371,
15692515-15692613,15692948-15693020,15693634-15693719,
15694993-15695076,15695312-15695371,15695570-15695758
Length = 279
Score = 65.7 bits (153), Expect = 4e-11
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Frame = -3
Query: 726 IXTVIPRVYTXYVSAALFAIFGIKMLRDGWKMDPNEXXXXXXXGAE*IKKKRGSGRERGD 547
+ +I R +T + L+ FG+++L WK DP E +++K SG+
Sbjct: 126 VPNLISRKHTNSAATVLYLFFGLRLLYIAWKSDPK---GSQKKEMEEVEEKLESGQ---- 178
Query: 546 P*HAGARSSGEQAGGNVMRY*KCCYKPPH*LSWLNGETGRS*-PRLCWRPREDAVGVVVG 370
+S+ + G R+ + L++L RS + ++A+GV VG
Sbjct: 179 -----GKSTLRRFFG---RFCTPIFLEAFILTFLAEWGDRSQIATIALATHKNAIGVAVG 230
Query: 369 GSLGHALCTGLAVIGGRMVAQKISVRTVTIIGGI 268
SLGH +CT LAVIGG M+A KIS RTV IGG+
Sbjct: 231 ASLGHTVCTSLAVIGGSMLASKISQRTVATIGGV 264
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -2
Query: 481 VLLQAATLTFLAEWGDRSQLATVVLATKR 395
+ L+A LTFLAEWGDRSQ+AT+ LAT +
Sbjct: 194 IFLEAFILTFLAEWGDRSQIATIALATHK 222
>08_02_1347 -
26300295-26300483,26300598-26300657,26300850-26300933,
26301410-26301495,26302112-26302184,26302287-26302385,
26302526-26302639,26302751-26302807,26302908-26302994
Length = 282
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = -3
Query: 396 EDAVGVVVGGSLGHALCTGLAVIGGRMVAQKISVRTVTIIGGI 268
++AVGV VG +LGH +CT AV+GG M+A KIS TV IGG+
Sbjct: 225 KNAVGVAVGATLGHTICTSFAVVGGSMLASKISQGTVATIGGL 267
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -2
Query: 481 VLLQAATLTFLAEWGDRSQLATVVLATKR 395
+ L++ LTFLAEWGDRSQ+AT+ LAT +
Sbjct: 197 IFLESFVLTFLAEWGDRSQIATIALATHK 225
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -3
Query: 726 IXTVIPRVYTXYVSAALFAIFGIKMLRDGWKMD 628
+ +I R +T + L+A FG+++L W+ D
Sbjct: 129 VPNLISRKHTNSAATVLYAFFGLRLLYIAWRSD 161
>11_06_0020 -
19304740-19304790,19304869-19304973,19305063-19305113,
19305377-19305442,19305722-19305882,19306050-19306146,
19306516-19306563,19307173-19307261,19307447-19307492
Length = 237
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = -2
Query: 487 LKVLLQAATLTFLAEWGDRSQLATVVL 407
L+VL ++ +L F AEWGDRS LAT+ L
Sbjct: 156 LEVLWKSFSLVFFAEWGDRSMLATIAL 182
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 384 GVVVGGSLGHALCTGLAVIGGRMVAQKISVRTV 286
GV G GH + T LA++GG +A +S + V
Sbjct: 190 GVASGAIAGHLVATFLAIVGGAFLANYLSEKLV 222
Score = 29.5 bits (63), Expect = 3.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 693 YVSAALFAIFGIKMLRDGWKMDPN 622
Y + AL A FG K ++D W++ N
Sbjct: 100 YAAIALLAFFGFKSIKDAWQLPDN 123
>08_02_0766 -
20993207-20993307,20993510-20993612,20993686-20993730,
20993848-20993916,20994463-20994510,20995357-20995404,
20995492-20995551,20996063-20996119,20996403-20996471,
20996511-20996603
Length = 230
Score = 36.3 bits (80), Expect = 0.026
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = -2
Query: 481 VLLQAATLTFLAEWGDRSQLATVVLA 404
+ ++A ++TF EWGD+SQ+AT+ LA
Sbjct: 145 IFIKAFSITFFGEWGDKSQIATIGLA 170
>07_03_1228 - 25009736-25010965
Length = 409
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1
Query: 611 EELEEVQSELKRREDQEEKEETLDMLEQGQAENKPEE 501
EE EE E + E++EE+EE + E G+ E +PEE
Sbjct: 295 EEPEEGGEEEEEEEEEEEEEEEEEPEEGGEEEEEPEE 331
>06_01_0283 + 2083627-2084334,2085759-2085986
Length = 311
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -1
Query: 614 REELEEVQSELKRREDQEEKEETLDMLEQGQAENKPEET*CDTE 483
+EE EE + E + E++ E+E+ +DM E+G+ + E TE
Sbjct: 193 QEEEEEEEEEEEEEEEESEEEQGMDMEEKGRGADNSSENPSVTE 236
>06_03_0500 +
21470681-21470952,21471049-21471089,21472322-21472485,
21472577-21472679,21472806-21472975,21473766-21474239
Length = 407
Score = 31.5 bits (68), Expect = 0.74
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -1
Query: 632 WTQTKVREELEEVQSELKRREDQEEKEETLD 540
+ + + EE+EEV+ E++ E++EE+EE D
Sbjct: 15 YEEEEEEEEVEEVEEEVEEEEEEEEEEEGAD 45
>06_03_1085 +
27491735-27492754,27492854-27492978,27493088-27493232,
27493328-27493591
Length = 517
Score = 31.1 bits (67), Expect = 0.97
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = -1
Query: 641 AGKWTQTKVREELEEVQSELKRREDQ--EEKEETLDMLEQGQAENKPEE 501
AG+ + ++E EE +E K+ E+Q EE+E + ++G+ E KP E
Sbjct: 106 AGEKKDGEEKKEEEEPVTEEKKEEEQGEEEEEPKKEEADEGEKEEKPAE 154
>07_01_0513 +
3828196-3828309,3828408-3828722,3828823-3828879,
3829668-3829826,3829918-3830028,3830173-3830259,
3830359-3830591,3830808-3830886,3831173-3831316,
3831529-3831568,3831667-3831729,3832193-3832224,
3832320-3832361,3832444-3832557
Length = 529
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -1
Query: 710 QECTRXTSARPCSRYSASKC*GTAGKWTQTKVREELEEVQSELKRREDQEEKEETLDMLE 531
++ T+ TS P R SA G A K+T+ ++ + E+ ED +EK ++ +
Sbjct: 335 EDNTQSTSQAPSVRQSARTA-GKALKYTEISSGDDSSDNDDEIDVPEDMDEKVKSPAVKN 393
Query: 530 QGQAEN-KPEET 498
+ Q+E+ KP ++
Sbjct: 394 ESQSEDIKPADS 405
>06_03_1500 +
30602846-30603185,30603244-30603323,30603477-30603566,
30603677-30603909,30604126-30604204,30604320-30604464,
30604815-30604877,30605343-30605374,30605475-30605516,
30605599-30605712
Length = 405
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -1
Query: 710 QECTRXTSARPCSRYSASKC*GTAGKWTQTKVREELEEVQSELKRREDQEEKEETLDMLE 531
++ T+ TS P R SA G A K+T+ ++ + E+ ED +EK ++ +
Sbjct: 224 EDNTQSTSQAPSVRQSARTA-GKALKYTEISSGDDSSDNDDEIDVPEDMDEKMKSPAVKN 282
Query: 530 QGQAEN-KPEE 501
+ Q+E+ KP +
Sbjct: 283 ESQSEDIKPAD 293
>03_06_0135 +
31928838-31929698,31929783-31929932,31930795-31931065,
31931157-31931249,31931442-31931616,31931715-31931960,
31932100-31932294,31932604-31932802
Length = 729
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = -1
Query: 683 RPCSRYSASKC*GTAGKWTQTKVREELEEVQSELKRRE---DQEEKEETLDMLEQGQAEN 513
RP + S A Q+K E E +EL+ E DQEEKE L M E+
Sbjct: 118 RPNATASPDSTPANADHAVQSKPAEPEPEPGTELEEEEVEQDQEEKEAELPMPEESGDGK 177
Query: 512 KPEE 501
PEE
Sbjct: 178 APEE 181
>03_05_0175 +
21513767-21513903,21534361-21535385,21537375-21537547,
21537849-21538679
Length = 721
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/73 (23%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -1
Query: 716 LSQECTRXTSARPCSRYSASKC*GTAGKWTQTKVREELEEVQSELKR-REDQEEKEETLD 540
L Q T+ +S CS +++ + T + + E+++ + R +E Q++K++
Sbjct: 484 LDQYATKRSSGDACSASTSNSEQQQQQQQKHTNKKRKREQLEQQQHRGQEIQQQKQQIKP 543
Query: 539 MLEQGQAENKPEE 501
++GQ + KPE+
Sbjct: 544 QGKKGQQQTKPEQ 556
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = -1
Query: 635 KWTQTKV---REELEEVQSELKRREDQEEKEETLDMLEQGQAENKPEET*CDTESAATSR 465
+WT + EE EEV+ E E++ E+EE + +E+ + E + EE E
Sbjct: 42 RWTASDEEEKEEEEEEVEEEEVEEEEEIEEEEVEEEIEEEEEEIEEEEEEVREEVQEAGE 101
Query: 464 HID 456
+D
Sbjct: 102 EVD 104
>12_02_1113 -
26165074-26165889,26166077-26166202,26166294-26166457,
26166539-26166576,26166670-26166885,26166984-26167145,
26167212-26167497,26167585-26167761,26167864-26167971,
26168076-26168175,26168283-26168359,26168608-26168803,
26169032-26169363,26169476-26169589,26169651-26169753
Length = 1004
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -1
Query: 626 QTKVREELEEVQSELKRREDQEEKEETLDMLEQGQAENKPEET*CDTESAATSRHID 456
Q K++E ++ E K + + D L Q Q KPE + C T S R+++
Sbjct: 731 QEKIKELEAQLLVERKIARQHVDNKIAQDHLHQQQQSKKPENSPCPTRSPMAERNLN 787
>01_06_1577 -
38379951-38380167,38380349-38380543,38380919-38381191,
38381281-38381455,38381925-38382035,38382120-38382390,
38382990-38383139,38383242-38384246
Length = 798
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = -1
Query: 626 QTKVREELEEVQSELKRREDQEEKEE---TLDMLEQGQAENKPEET 498
+ K E+ ++ QS+ +R++DQEEK E + D +Q Q E +E+
Sbjct: 166 EEKSEEKKDDEQSDGERKDDQEEKAEGSGSKDTTDQPQIEETVDES 211
>12_01_0220 -
1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = -1
Query: 611 EELEEVQSELKRREDQEEKEETLDMLEQGQAENKPEE 501
EEL++V E + E++EE+EE + LE +A N+ E+
Sbjct: 136 EELDDVDDEEESEEEEEEEEEDKEGLED-KAGNQVED 171
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -1
Query: 632 WTQTKVREELEEVQSELKRREDQEEKEETLDMLEQGQAENKPEE 501
W + EE EE E + ED+E+ +E LD LE E + EE
Sbjct: 207 WMEEDSDEEEEEDLDEDEDNEDEEDDDEHLD-LEDFDDEEEEEE 249
>12_01_0926 + 9178804-9180324,9180612-9181157
Length = 688
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/30 (46%), Positives = 24/30 (80%), Gaps = 2/30 (6%)
Frame = -1
Query: 620 KVREELEEVQSELKRREDQEE--KEETLDM 537
KV+EE E+V+ E ++ ++Q+E KE+T+DM
Sbjct: 507 KVKEENEKVKEENEKVKEQDEKVKEQTVDM 536
>05_03_0008 +
7332224-7332700,7335136-7335153,7335747-7335848,
7336927-7337202,7337474-7337674
Length = 357
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -1
Query: 611 EELEEVQSELKRREDQEEKEETLDMLEQGQAENKPEE 501
+E E+ + ++ E++EE++E E GQ E +P+E
Sbjct: 74 DEEEQDEEGMEMEEEEEEEQEQEQEEEDGQNEQQPQE 110
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -1
Query: 602 EEVQSELKRREDQEEKEETLDMLEQGQAENKPEET*CDTE 483
+E ++E +++E+KEE + + + E+K EET D E
Sbjct: 196 KEEETEKDNEKEKEDKEEETEKDNEKEKEDKEEETKKDNE 235
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/42 (30%), Positives = 29/42 (69%)
Frame = -1
Query: 629 TQTKVREELEEVQSELKRREDQEEKEETLDMLEQGQAENKPE 504
T K +E+ +E ++E ++ E++E+K++ + LE+ + EN+ E
Sbjct: 244 TDEKEKEKEKEDENEEEKLEEEEKKDKE-EKLEEKEKENEEE 284
>01_06_0561 +
30251547-30252173,30252248-30252405,30253250-30254192,
30254271-30254438,30254546-30254857,30255498-30255557,
30255905-30255937,30256083-30256271
Length = 829
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -1
Query: 614 REELEEVQSELKRREDQEEKEETLDMLEQGQ 522
R LEE ++ L+ RE+ EE+E LD L Q Q
Sbjct: 274 RNSLEEREAALRLREEIEEQELLLDFLLQLQ 304
>07_03_0965 -
22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = -1
Query: 743 RXXSXGXPPLSQECTRXTSARPCSRYSASKC*GTA-GKWTQTKVREELEEVQSELKRRED 567
R S P L++ +R + P SR A A T T E E ++RED
Sbjct: 361 RPASPAKPDLAEPSSRPETL-PASRSDAKASVSAATDSGTTTATAGAQHEAMREQEKRED 419
Query: 566 QEEKEETLDMLEQGQAENKPE 504
++ L E + +++PE
Sbjct: 420 HRSRDSELRPGESDRRDHRPE 440
>07_03_0067 + 13018729-13019187,13019197-13019901
Length = 387
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 394 RRCWRCSRGVARTRAVHGLGCD 329
R WRC+ G+ + VHG G D
Sbjct: 285 RAAWRCTWGMVQNDLVHGWGLD 306
>05_04_0131 +
18290201-18290650,18291474-18291626,18291950-18292042,
18292285-18292313,18292702-18292795,18292941-18293153
Length = 343
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -1
Query: 590 SELKRREDQEEKEETLDMLEQGQAENKPEET 498
+E++ +D E +E + E+ + ENKP+ET
Sbjct: 86 TEVQPADDSEPEETSRSTTEEKKEENKPDET 116
>04_03_0213 +
12709396-12709564,12709659-12710217,12710312-12710606,
12710688-12710786,12710864-12711203,12711571-12711812
Length = 567
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -1
Query: 611 EELEEVQSELKRREDQEEKEETLDMLEQGQAENKPEET*CDTESAATSR 465
E+ +E + + E E++EE D L Q E+ PE + D SR
Sbjct: 416 EQDKEAEEGDEEEEGDEDREEEADELGPSQLEDAPESSQPDISQPGPSR 464
>02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,
8509204-8509553,8509631-8509729,8509811-8510105,
8510200-8510405,8510498-8510689,8510766-8511163,
8511258-8511444,8511473-8511528,8511800-8511872,
8512012-8512872,8514353-8514778
Length = 1134
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -1
Query: 611 EELEEVQSELKRREDQEEKEETLDMLEQGQAENKPEET*CDTESAATSR 465
E+ +E + + E E++EE D L Q E+ PE + D SR
Sbjct: 973 EQDKEAEEGDEEEEGDEDREEEADELGPSQLEDAPESSQPDISQPGPSR 1021
>02_01_0073 -
509377-509425,510200-510270,510420-510539,510684-510769,
510843-510915,510996-511718,513752-514081,514124-514210,
514494-515250,515336-515399,515477-515609,515702-515801,
515952-516088,516195-516341,516428-516478,517083-517148
Length = 997
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 582 KKKRGSGRERGDP*HAGARSSGEQ 511
K+KRG GR R P A A+ +GE+
Sbjct: 4 KRKRGGGRPRKAPEDAAAKENGEK 27
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,004,513
Number of Sequences: 37544
Number of extensions: 350556
Number of successful extensions: 1295
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -