Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_M04
(782 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0276 + 23771233-23771268,23773552-23773897,23774425-237745... 133 1e-31
03_05_1050 - 29966031-29966076,29966180-29966232,29966420-299668... 96 2e-20
02_05_0970 - 33179180-33179210,33179297-33179441,33180307-331803... 89 3e-18
03_05_1049 - 29956379-29956400,29957103-29957188,29957269-299574... 65 5e-11
03_05_0520 + 25139314-25139364,25139580-25139711,25141594-251417... 52 4e-07
06_01_0077 + 626126-626137,626222-627421 33 0.34
03_06_0019 - 31078669-31080081 32 0.45
11_05_0050 + 18665251-18665613,18667280-18667744,18668548-186690... 30 1.8
11_01_0545 + 4308167-4308496 30 1.8
07_03_0762 + 21324550-21325414,21325606-21325746,21325993-213261... 30 1.8
05_02_0049 - 6083364-6084111,6084140-6084246 30 2.4
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494... 30 2.4
11_01_0311 + 2322511-2323527 29 3.2
03_06_0080 - 31512792-31513046,31514087-31514202,31514797-315149... 29 3.2
05_02_0067 + 6298232-6298294,6298532-6299068 29 4.2
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329... 29 5.5
06_01_0072 + 596333-597442 28 7.3
02_05_1055 - 33798162-33798290,33798417-33798604,33798707-337987... 28 7.3
11_01_0374 - 2843405-2843508,2844134-2844239,2844327-2844409,284... 28 9.6
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148... 28 9.6
01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592 28 9.6
>05_05_0276 +
23771233-23771268,23773552-23773897,23774425-23774541,
23774712-23774810,23774949-23775016,23775107-23775181,
23775386-23775931,23776040-23776092,23776163-23776204,
23776314-23776458,23776541-23776651,23777496-23777921,
23778116-23778373
Length = 773
Score = 133 bits (322), Expect = 1e-31
Identities = 80/214 (37%), Positives = 113/214 (52%), Gaps = 1/214 (0%)
Frame = -3
Query: 729 PRPHXQTLHTHPDKTRKGIQTSPEGKVTNIPDTMIPNQFGIVGLLTFIRAAESDPSLVSL 550
P+P +T T P+ + S + + PD P +G+ GLL ++ E P+ SL
Sbjct: 323 PKPSQRT-DTAPESHKVQSPKSSQ-RTDTAPDPYDP--YGLHGLLRVMKLKEEGPA--SL 376
Query: 549 ALGQDLTALGLNLNSPDNLNLTFAGPWADTPCRPQDMDYHVPPEYLINGSIREKLAPLRL 370
ALG DLT LGL++NS DNL TF PW+ P + ++ Y +P Y + L L
Sbjct: 377 ALGIDLTTLGLDMNSSDNLYKTFGSPWSSEPVK-EEYSYEIPDCY--SSMQPPPLQALHF 433
Query: 369 GRYKEDLLFYLFYCFVGDVLQIAAAAELNNREWRYHMEEKVWISQAPGMPMVEKTSTYER 190
R+ LFY+FY D Q+ AA E+ W YH E + W+ +AP + KT+TYE+
Sbjct: 434 LRFHLMTLFYIFYSMPQDAAQLYAANEICKYGWVYHKELRQWVKRAPNTTPLVKTTTYEQ 493
Query: 189 GTYYFFDAHNWRKVPKE-FHLDYSKLEGRPQLPP 91
G Y FDA+ W +PK+ F L Y +E P LPP
Sbjct: 494 GLCYLFDANIWDAIPKDNFILRYDDIEKIPALPP 527
>03_05_1050 -
29966031-29966076,29966180-29966232,29966420-29966845,
29966983-29967060,29967135-29967220,29969054-29969155,
29969221-29969427,29970528-29970885,29971011-29971174,
29971258-29971366,29971595-29971600
Length = 544
Score = 96.3 bits (229), Expect = 2e-20
Identities = 50/113 (44%), Positives = 70/113 (61%)
Frame = -3
Query: 624 PNQFGIVGLLTFIRAAESDPSLVSLALGQDLTALGLNLNSPDNLNLTFAGPWADTPCRPQ 445
P+ +G++GLL IR ++D L SLALG DLT LGLNLNSPDNL TF PW++ P + +
Sbjct: 437 PDPYGLMGLLGVIRMNDAD--LASLALGMDLTTLGLNLNSPDNLYKTFGSPWSNEPAKGE 494
Query: 444 DMDYHVPPEYLINGSIREKLAPLRLGRYKEDLLFYLFYCFVGDVLQIAAAAEL 286
++H+P Y N L P+ +++ LFY+FY D Q+ AA+EL
Sbjct: 495 P-EFHIPACY--NAEQPPPLQPIHFQKFQTLTLFYIFYSMPRDEAQLCAASEL 544
>02_05_0970 -
33179180-33179210,33179297-33179441,33180307-33180362,
33180650-33180691,33180814-33180866,33181059-33181490,
33181630-33181707,33181785-33181870,33183588-33183689,
33183754-33183960,33184976-33185336,33185463-33185626,
33185709-33185817,33186468-33186485
Length = 627
Score = 89.4 bits (212), Expect = 3e-18
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Frame = -3
Query: 741 LQRFPRPHXQTLHTHPDKTRKGIQTSPEGKVTNIPDTMIPNQ-FGIVGLLTFIRAAESDP 565
+Q++ +P Q + Q+ + + +I P+ +G++GLL IR +D
Sbjct: 405 IQQYQQPQAQNPF-RLQQVSSATQSYRDQSLKSIQGGQTPSDPYGLMGLLGVIRM--NDV 461
Query: 564 SLVSLALGQDLTALGLNLNSPDNLNLTFAGPWADTPCRPQDMDYHVPPEYLINGSIREKL 385
L SLALG DLT LGLNLNSPDNL TF PW++ P + + ++H P Y + L
Sbjct: 462 DLSSLALGIDLTTLGLNLNSPDNLYKTFGSPWSNEPAKGEP-EFHTPACY--SAEQPPPL 518
Query: 384 APLRLGRYKEDLLFYLFYCFVGDVLQIAAAAEL 286
P+ +++ LFY+FY D Q+ AA+EL
Sbjct: 519 QPIHFQKFQTPTLFYIFYSMPRDEAQLCAASEL 551
>03_05_1049 -
29956379-29956400,29957103-29957188,29957269-29957413,
29958518-29958813,29959242-29959253
Length = 186
Score = 65.3 bits (152), Expect = 5e-11
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -3
Query: 282 NREWRYHMEEKVWISQAPGMPMVEKTSTYERGTYYFFDAHNWRKVPKE-FHLDYSKLEGR 106
NR W YH E +VW+++ P + + KT YERG+Y FD +NW + K+ F L Y ++E +
Sbjct: 105 NRGWFYHKEVRVWLTRIPNVEPLVKTPHYERGSYGCFDPNNWETIRKDNFVLHYDQIEKK 164
Query: 105 PQLP 94
P +P
Sbjct: 165 PAIP 168
>03_05_0520 + 25139314-25139364,25139580-25139711,25141594-25141731,
25143191-25143241,25143662-25143751,25143854-25144000,
25144108-25144218,25144307-25144375,25144777-25145517,
25145840-25146004,25146376-25146442,25146580-25146704,
25148714-25148983,25149065-25149199,25149316-25149497,
25149669-25149744
Length = 849
Score = 52.4 bits (120), Expect = 4e-07
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Frame = -3
Query: 354 DLLFYLFYCFVGDVLQIAAAAELNNREWRYHMEEKVWISQAPGMPMVEKTSTYERGTYYF 175
DLLF+ FY Q +A EL + WR+H + W Q P V T YERG+Y +
Sbjct: 754 DLLFFAFYYQQNTYQQFLSARELKKQSWRFHRKYNTWF-QRHVEPQV-TTDEYERGSYVY 811
Query: 174 FDAH--------NW-RKVPKEFHLDYSKLE 112
FD H W +++ +F +Y+ LE
Sbjct: 812 FDFHVIDDGTGSGWCQRIKNDFTFEYNFLE 841
>06_01_0077 + 626126-626137,626222-627421
Length = 403
Score = 32.7 bits (71), Expect = 0.34
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 111 PPACCNPNETLSAPFSNCAHRRSSRCRVRTLKS-SRPLACR 230
PP PN + AP+S+ HR+ C V L + + PL C+
Sbjct: 84 PPLLVRPNVRVKAPYSSNGHRKLRSCEVIDLANRNTPLRCQ 124
>03_06_0019 - 31078669-31080081
Length = 470
Score = 32.3 bits (70), Expect = 0.45
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Frame = -2
Query: 265 SYGGE--GVDLTSAR----HANGREDFNVRTRHLLLLRCAQLEKGAERVSFGLQQAGG 110
S+GGE GVD+ S H + R D T LLL ++LEK R++ AGG
Sbjct: 56 SHGGELGGVDMVSISDGLGHGDDRSDLGRLTESLLLAMPSELEKLVGRINASASAAGG 113
>11_05_0050 +
18665251-18665613,18667280-18667744,18668548-18669037,
18669115-18669143
Length = 448
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +3
Query: 99 TAADPPACCNPNETLSAPFSNCAHRRSSRCRVRTLKSSRPLACRALVRSTPSPPYDIAI 275
+ A P NP + S+ H R+ +C+V T+K + C + + + PY + +
Sbjct: 230 SGATTPVNANPPGSRSSDKQPICHCRAGKCKVETIKGQKYYVC-CIQKGQGACPYQVPV 287
>11_01_0545 + 4308167-4308496
Length = 109
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 637 GYNDTKPIWNSRSIDFYPCCGIG 569
GYN W S+ I Y CCG G
Sbjct: 80 GYNPGSACWTSKDIKLYCCCGHG 102
>07_03_0762 +
21324550-21325414,21325606-21325746,21325993-21326177,
21326200-21326410,21326526-21326769,21326853-21327003,
21327089-21327439
Length = 715
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 432 DNPCP-VVCKAYPPMGQQTSS*GYQVNLN 515
D P P V+C YPP G + + YQVNL+
Sbjct: 33 DEPPPWVLCGPYPPSGNYSKNGTYQVNLD 61
>05_02_0049 - 6083364-6084111,6084140-6084246
Length = 284
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Frame = +3
Query: 24 TCTFYITKLQ*SERR--GCAT*AHGAVTAADPPACCNPNETLSAPFSNCAHRRSSRCRVR 197
T +F K Q RR G A A AA C + + S+P S A S R
Sbjct: 26 TASFPAPKSQMRRRRSGGAGVPADAASAAASAGRCWSSSSWRSSPPSPAARSTCSTARTA 85
Query: 198 TLKSSRPLACRAL-VRSTPSPP 260
SRP AL + S+P+ P
Sbjct: 86 PASPSRPSKLTALNLSSSPTSP 107
>03_05_0780 +
27646936-27647084,27647168-27647289,27649380-27649458,
27650346-27650427,27650483-27650600,27650695-27651050,
27651404-27652222,27652846-27653265,27653426-27653437
Length = 718
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = +3
Query: 120 CCNPNETLSAPFSNCAHRRSSRCRVRTL---KSSRPLACRALVRSTPSPP 260
C P LS P S C H R C V T+ SR + + S+ PP
Sbjct: 517 CRRPATVLSPPTSRCCHHRYEICAVATVAVAPCSRAVVADDVAASSAVPP 566
>11_01_0311 + 2322511-2323527
Length = 338
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +3
Query: 90 GAVTAADPPACCNPNETLSAPFSNCAHRRSSRCRVRTLKSSRPLACRALVRSTPSPPYDI 269
GAV AD AC P+ T S C+ S+ + S ++ RA + + P+PP +
Sbjct: 23 GAVRVADVAACTAPSST---RVSTCSSSSSTTASSSSPTLSVTVSYRATLLAAPAPPLQL 79
Query: 270 AI 275
+
Sbjct: 80 RL 81
>03_06_0080 -
31512792-31513046,31514087-31514202,31514797-31514911,
31514997-31515056,31515619-31515688,31515952-31515986,
31516094-31516231,31516369-31516737
Length = 385
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 474 PWAD-TPCRPQDMDYHVPPEYLINGSIREK 388
PW TPC D+ + VPPE+ +G + K
Sbjct: 149 PWTQPTPCSHVDLKFPVPPEHCTSGIMDNK 178
>05_02_0067 + 6298232-6298294,6298532-6299068
Length = 199
Score = 29.1 bits (62), Expect = 4.2
Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = -2
Query: 304 CG-CSRVKQSRMAISYGGEGVDLTSARHANGREDFNVRTRHLLLLRCAQLEKGAERVSFG 128
CG C+ + RM GG GV+ H DFN TR L A + R SF
Sbjct: 105 CGLCAEAVRERMRGGGGGGGVEAALRWHMEVCRDFNSTTRLNPKLSLAGSMRDIARRSFN 164
Query: 127 LQ-QAGGSAAVT 95
+ A SAA T
Sbjct: 165 RRTTASTSAAAT 176
>02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,
3299528-3299531,3299814-3299949,3300034-3300090,
3301689-3301786,3301876-3301947,3302056-3302228,
3302552-3302698,3303113-3303336,3305300-3305306,
3305634-3305800,3306033-3306068,3306787-3307004,
3307115-3307172,3307761-3307842,3308045-3308207,
3308594-3308598,3308700-3308885,3308969-3309548,
3309642-3309774,3309880-3309948,3310184-3310395,
3310654-3310891,3311228-3311386,3311501-3311926,
3312010-3312447,3312593-3312712,3312784-3313266,
3313471-3314009,3314178-3314667,3314836-3314904,
3315735-3315839,3315940-3316158,3316254-3316508,
3316602-3316651,3317175-3317284,3317372-3317454,
3317560-3317772,3317870-3318040
Length = 2391
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 588 IRAAESDPSLVSLALGQDLTALGLNLNSPDNL 493
++A SDP++ L L + LGLNL S D L
Sbjct: 2219 VKAFNSDPTIDVLLLTTHVGGLGLNLTSADTL 2250
>06_01_0072 + 596333-597442
Length = 369
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 531 TALGLNLNSPDNLNLTFAGPWA 466
++LGL LN P NL AGPW+
Sbjct: 119 SSLGLFLNCPKNLRNDDAGPWS 140
>02_05_1055 -
33798162-33798290,33798417-33798604,33798707-33798767,
33799045-33799122,33799250-33799472,33799599-33799824,
33799922-33800116,33800210-33800627,33800904-33801182
Length = 598
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 309 QIAAAAELNNRE-WRYHMEEKVWISQAPGMPMVEKTSTYERGT 184
++AAA+E++ + WR +EE W S G+ + T + G+
Sbjct: 505 EVAAASEISGEKFWRMPLEESYWESMKSGVADMVNTGGRQGGS 547
>11_01_0374 -
2843405-2843508,2844134-2844239,2844327-2844409,
2844886-2845078,2845527-2845662,2846185-2846264,
2846348-2846932,2847058-2847126,2847203-2847347,
2847442-2847542,2848208-2849066,2849397-2849536,
2849606-2849783,2849885-2850287,2850770-2850833,
2851223-2851278,2851470-2851572
Length = 1134
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = -2
Query: 139 VSFGLQQAGGSAAVTAPCAHVAHPRLSL 56
VS GL++A G++ +AP +H+A ++SL
Sbjct: 772 VSDGLKRAVGTSPTSAPSSHLAENQMSL 799
>02_01_0003 +
13079-13610,14005-14312,14364-14549,14620-14707,
14807-14887,14980-15044,15357-15497,15578-15694,
15995-16237,16326-16383,18127-18224
Length = 638
Score = 27.9 bits (59), Expect = 9.6
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = -3
Query: 726 RPHXQTLHTHPDKTRKGIQTSPEGKVTNIPDTMIPNQFGIVGLLTFIRAAESDPSLV--- 556
+ H + +HP RK + T +G+ D M ++ G L TF+ A + DPSL+
Sbjct: 197 KSHSHRIPSHPIAPRKTL-TQRQGR--RGADAMDASRVG--ELRTFVEACKKDPSLLADP 251
Query: 555 SLALGQD-LTALGLNL 511
+LA +D L +LG +L
Sbjct: 252 NLAFFRDYLESLGAHL 267
>01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592
Length = 853
Score = 27.9 bits (59), Expect = 9.6
Identities = 21/75 (28%), Positives = 28/75 (37%)
Frame = +3
Query: 63 RRGCAT*AHGAVTAADPPACCNPNETLSAPFSNCAHRRSSRCRVRTLKSSRPLACRALVR 242
RRG + A A AAD P C + + A + CAH R + CR
Sbjct: 303 RRGSRSSARCAA-AADHPGCSDKLTSPDAAVAPCAHDTKILFVDRVEDADAAKKCRHTAA 361
Query: 243 STPSPPYDIAIRDCL 287
P P D +C+
Sbjct: 362 PPPPPTKDPTTVECV 376
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,215,104
Number of Sequences: 37544
Number of extensions: 473324
Number of successful extensions: 1422
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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