Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_M03
(800 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 46 6e-06
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 44 3e-05
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 43 6e-05
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 42 1e-04
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 40 4e-04
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 38 0.001
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 38 0.001
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 38 0.001
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 37 0.004
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 37 0.004
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 36 0.005
SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr 2... 27 4.1
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 27 4.1
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 25 9.5
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 46.0 bits (104), Expect = 6e-06
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -3
Query: 357 CHACGKAYTTKKTLEGHVRSHTGERPFACT--RCPSTFRYEAALYNHNKLVHAA 202
C G T++ L H+RSHTGE+PF C+ C +F AL H + VH A
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEA 133
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 43.6 bits (98), Expect = 3e-05
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Frame = -3
Query: 363 HVCHACGKAYTTKKTLEGHVRSHTGERPFAC-------TRCPSTFRYEAALYNHNKLVH 208
+VC C +A+ + L+ H+RSHT E+PF C T C F L H + +H
Sbjct: 70 YVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIH 128
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 42.7 bits (96), Expect = 6e-05
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -3
Query: 348 CGKAYTTKKTLEGHVRSHTGERPFAC--TRCPSTFRYEAALYNHNK 217
CGK Y+ LE H+R+H+ ERPF C T C F ++ L H +
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKR 75
Score = 33.5 bits (73), Expect = 0.036
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -3
Query: 357 CH--ACGKAYTTKKTLEGHVRSHTGERPFACT--RCPSTFRYEAALYNHNKLVH 208
CH C + T++ LE H+ H +P+ACT C F L +H H
Sbjct: 85 CHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACH 138
Score = 32.7 bits (71), Expect = 0.062
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -3
Query: 348 CGKAYTTKKTLEGHVRSHTGERPFAC--TRCPSTFRYEAALYNH 223
C KA+ K L+ H R HT +PF+C C + F + L H
Sbjct: 60 CSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERH 103
Score = 32.7 bits (71), Expect = 0.062
Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 2/89 (2%)
Frame = -3
Query: 483 HLKIAPI-RCSVSGCEFACPSXXXXXXXXXXXXXXXXXXRNHVCHACGKAYTTKKTLEGH 307
H++ A + CS+ G +F + + C K++T L+ H
Sbjct: 197 HIREAHVPSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKH 256
Query: 306 VRS-HTGERPFACTRCPSTFRYEAALYNH 223
+ H G F C C + F Y+ L H
Sbjct: 257 ISVIHEGNMAFHCDSCGTKFGYKHMLQRH 285
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 41.9 bits (94), Expect = 1e-04
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -3
Query: 357 CHACGKAYTTKKTLEGHVRSHTGERPFACTRCPSTFRYEAALYNHNKL---VHAARQKT* 187
C C K++ + H + HTG + FAC C F AL H K + R T
Sbjct: 602 CSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKSEVGQNCLRTATE 661
Query: 186 R-LQVPPSRR 160
R +QVPPSR+
Sbjct: 662 RGIQVPPSRK 671
Score = 41.1 bits (92), Expect = 2e-04
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 366 NHVCH--ACGKAYTTKKTLEGHVRSHTGERPFACTRCPSTFRYEAALYNHNKL 214
N+VC C K +T L+ H+ +HT RPF C+ C +F + H +L
Sbjct: 569 NYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQL 621
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 39.9 bits (89), Expect = 4e-04
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -3
Query: 348 CGKAYTTKKTLEGHVRSHTGERPFACTRCPSTFRYEAALYNHNKLVH 208
C K++T K+ H RSHT + F C C S+F L H H
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKH 70
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 360 VCHACGKAYTTKKTLEGHVRS-HTGERPFACTRCPSTFRYEAALYNHNKL 214
VC C K + + L H+RS HT E+PF C C F L H +L
Sbjct: 424 VCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERL 472
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 38.3 bits (85), Expect = 0.001
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -3
Query: 348 CGKAYTTKKTLEGHVRSHTGERPFACTRCPSTFRYEAALYNHNKLVHAARQ 196
C K++T K+ L H R+H + F+C+ C F L H + +H +Q
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQ 83
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 38.3 bits (85), Expect = 0.001
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 357 CHACGKAYTTKKTLEGHVRSHTGERPFAC--TRCPSTFRYEAALYNHNKL 214
C C + ++ +L+ H SHTGERPF C C F + + H ++
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRI 519
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 366 NHVCHACGKAYTTKKTLEGHVRSHTGERPFACT--RCPSTFRYEAALYNH 223
++ C C + + ++ H+RSHTGE+PF C+ C F L H
Sbjct: 3 SYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRH 52
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -3
Query: 357 CHACGKAYTTKKTLEGHVRSHTGERPFACT--RCPSTFRYEAALYNHNKL 214
C C KA+ + H+R+HTGE+P CT C F L H ++
Sbjct: 28 CPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARI 77
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 36.3 bits (80), Expect = 0.005
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -3
Query: 363 HVC--HACGKAYTTKKTLEGHVRSHTGERPFACTRCPSTFRYEAALYNHNKL 214
+VC + C K K +E H+++H +RP+ C C + F L H ++
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRI 494
Score = 29.9 bits (64), Expect = 0.44
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = -3
Query: 357 CHACGKAYTTKKTLEGHVRSHTGERPFACTRCPSTFRYEAALYNHNK 217
C C + L+ H+R H RP+ C C F AL H +
Sbjct: 475 CDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKRFNRLDALNRHKQ 520
>SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 825
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 330 TKKTLEGHVRSHTGERPFACTRCPSTFRYEAA 235
T+ T+EG+ T PF C +T RY A
Sbjct: 736 TRVTMEGYREEGTTTTPFNMMMCNNTSRYHVA 767
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -3
Query: 360 VCHACGKAYTTKKTLEGHVRSHTGERPFACTRCPSTFR--YEAALYNH 223
+C+ C A L G +R H G +CT+C R Y+ A +N+
Sbjct: 484 LCYVCHSALEEDCVLLGEIRCHIG--CLSCTKCKYNNRENYDWARWNN 529
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 25.4 bits (53), Expect = 9.5
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -3
Query: 504 RSTTWAVHLKIAPIRCSVSGCEFAC 430
R+ TW +H + P+ +GC+ C
Sbjct: 221 RNRTWLLHWSLFPLFNHANGCDTLC 245
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,406,174
Number of Sequences: 5004
Number of extensions: 38309
Number of successful extensions: 118
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 117
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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