Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_L22
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 186 2e-47
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 186 2e-47
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 186 2e-47
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 186 2e-47
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 186 2e-47
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 186 2e-47
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 186 2e-47
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 186 2e-47
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 183 1e-46
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 183 1e-46
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 183 1e-46
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 182 2e-46
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 178 4e-45
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 172 2e-43
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 172 2e-43
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 166 2e-41
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 62 3e-10
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 52 6e-07
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 52 6e-07
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 52 6e-07
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 49 3e-06
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine rec... 28 8.8
AC024824-2|AAK85502.1| 740|Caenorhabditis elegans Hypothetical ... 28 8.8
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 186 bits (453), Expect = 2e-47
Identities = 90/135 (66%), Positives = 92/135 (68%)
Frame = -1
Query: 614 PPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXY 435
P NQMVKCDPRHGKYMA C+L+RGDVVPKDVN IQ VDWCPTGFKVGI Y
Sbjct: 298 PHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINY 357
Query: 434 QPPTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXWXVXXXXXXXX 255
QPPTVVPGG LAKV AVCMLS TTA AE W LDHKFDLM AK A V W V
Sbjct: 358 QPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 254 XXXXXXXLAALEKDY 210
LAALEKDY
Sbjct: 418 FSEAREDLAALEKDY 432
Score = 41.1 bits (92), Expect = 9e-04
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2
Query: 724 PRIQFPXXXXTRQLFSAEKAYHEQLSVAEIT 632
PRI FP + + SAEKAYHEQLSVAEIT
Sbjct: 263 PRIHFPLATFS-PVISAEKAYHEQLSVAEIT 292
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 186 bits (453), Expect = 2e-47
Identities = 90/135 (66%), Positives = 92/135 (68%)
Frame = -1
Query: 614 PPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXY 435
P NQMVKCDPRHGKYMA C+L+RGDVVPKDVN IQ VDWCPTGFKVGI Y
Sbjct: 297 PHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINY 356
Query: 434 QPPTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXWXVXXXXXXXX 255
QPPTVVPGG LAKV AVCMLS TTA AE W LDHKFDLM AK A V W V
Sbjct: 357 QPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 416
Query: 254 XXXXXXXLAALEKDY 210
LAALEKDY
Sbjct: 417 FSEAREDLAALEKDY 431
Score = 41.1 bits (92), Expect = 9e-04
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2
Query: 724 PRIQFPXXXXTRQLFSAEKAYHEQLSVAEIT 632
PRI FP + + SAEKAYHEQLSVAEIT
Sbjct: 262 PRIHFPLATFS-PVISAEKAYHEQLSVAEIT 291
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 186 bits (453), Expect = 2e-47
Identities = 90/135 (66%), Positives = 92/135 (68%)
Frame = -1
Query: 614 PPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXY 435
P NQMVKCDPRHGKYMA C+L+RGDVVPKDVN IQ VDWCPTGFKVGI Y
Sbjct: 298 PHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINY 357
Query: 434 QPPTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXWXVXXXXXXXX 255
QPPTVVPGG LAKV AVCMLS TTA AE W LDHKFDLM AK A V W V
Sbjct: 358 QPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 254 XXXXXXXLAALEKDY 210
LAALEKDY
Sbjct: 418 FSEAREDLAALEKDY 432
Score = 41.1 bits (92), Expect = 9e-04
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2
Query: 724 PRIQFPXXXXTRQLFSAEKAYHEQLSVAEIT 632
PRI FP + + SAEKAYHEQLSVAEIT
Sbjct: 263 PRIHFPLATFS-PVISAEKAYHEQLSVAEIT 292
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 186 bits (453), Expect = 2e-47
Identities = 90/135 (66%), Positives = 92/135 (68%)
Frame = -1
Query: 614 PPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXY 435
P NQMVKCDPRHGKYMA C+L+RGDVVPKDVN IQ VDWCPTGFKVGI Y
Sbjct: 298 PHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINY 357
Query: 434 QPPTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXWXVXXXXXXXX 255
QPPTVVPGG LAKV AVCMLS TTA AE W LDHKFDLM AK A V W V
Sbjct: 358 QPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 254 XXXXXXXLAALEKDY 210
LAALEKDY
Sbjct: 418 FSEAREDLAALEKDY 432
Score = 41.1 bits (92), Expect = 9e-04
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2
Query: 724 PRIQFPXXXXTRQLFSAEKAYHEQLSVAEIT 632
PRI FP + + SAEKAYHEQLSVAEIT
Sbjct: 263 PRIHFPLATFS-PVISAEKAYHEQLSVAEIT 292
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 186 bits (452), Expect = 2e-47
Identities = 90/135 (66%), Positives = 92/135 (68%)
Frame = -1
Query: 614 PPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXY 435
P NQMVKCDPRHGKYMA C+LYRGDVVPKDVN IQ VDWCPTGFKVGI Y
Sbjct: 296 PANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINY 355
Query: 434 QPPTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXWXVXXXXXXXX 255
QPPTVVPGG LAKV AVCMLS TTA AE W LD+KFDLM AK A V W V
Sbjct: 356 QPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGE 415
Query: 254 XXXXXXXLAALEKDY 210
LAALEKDY
Sbjct: 416 FTEAREDLAALEKDY 430
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -2
Query: 724 PRIQFPXXXXTRQLFSAEKAYHEQLSVAEIT 632
PRI FP T L SAEKAYHE LSV++IT
Sbjct: 261 PRIHFPLAAYT-PLISAEKAYHEALSVSDIT 290
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 186 bits (452), Expect = 2e-47
Identities = 90/135 (66%), Positives = 92/135 (68%)
Frame = -1
Query: 614 PPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXY 435
P NQMVKCDPRHGKYMA C+LYRGDVVPKDVN IQ VDWCPTGFKVGI Y
Sbjct: 296 PANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINY 355
Query: 434 QPPTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXWXVXXXXXXXX 255
QPPTVVPGG LAKV AVCMLS TTA AE W LD+KFDLM AK A V W V
Sbjct: 356 QPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGE 415
Query: 254 XXXXXXXLAALEKDY 210
LAALEKDY
Sbjct: 416 FTEAREDLAALEKDY 430
Score = 36.7 bits (81), Expect = 0.019
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = -2
Query: 724 PRIQFPXXXXTRQLFSAEKAYHEQLSVAEIT 632
PRI FP T L SA+KAYHE LSV +IT
Sbjct: 261 PRIHFPLAAYT-PLISADKAYHEALSVNDIT 290
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 186 bits (452), Expect = 2e-47
Identities = 90/135 (66%), Positives = 92/135 (68%)
Frame = -1
Query: 614 PPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXY 435
P NQMVKCDPRHGKYMA C+LYRGDVVPKDVN IQ VDWCPTGFKVGI Y
Sbjct: 296 PANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINY 355
Query: 434 QPPTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXWXVXXXXXXXX 255
QPPTVVPGG LAKV AVCMLS TTA AE W LD+KFDLM AK A V W V
Sbjct: 356 QPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGE 415
Query: 254 XXXXXXXLAALEKDY 210
LAALEKDY
Sbjct: 416 FTEAREDLAALEKDY 430
Score = 36.7 bits (81), Expect = 0.019
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = -2
Query: 724 PRIQFPXXXXTRQLFSAEKAYHEQLSVAEIT 632
PRI FP T L SA+KAYHE LSV +IT
Sbjct: 261 PRIHFPLAAYT-PLISADKAYHEALSVNDIT 290
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 186 bits (452), Expect = 2e-47
Identities = 90/135 (66%), Positives = 92/135 (68%)
Frame = -1
Query: 614 PPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXY 435
P NQMVKCDPRHGKYMA C+LYRGDVVPKDVN IQ VDWCPTGFKVGI Y
Sbjct: 296 PANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINY 355
Query: 434 QPPTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXWXVXXXXXXXX 255
QPPTVVPGG LAKV AVCMLS TTA AE W LD+KFDLM AK A V W V
Sbjct: 356 QPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGE 415
Query: 254 XXXXXXXLAALEKDY 210
LAALEKDY
Sbjct: 416 FTEAREDLAALEKDY 430
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -2
Query: 724 PRIQFPXXXXTRQLFSAEKAYHEQLSVAEIT 632
PRI FP T L SAEKAYHE LSV++IT
Sbjct: 261 PRIHFPLAAYT-PLISAEKAYHEALSVSDIT 290
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 183 bits (445), Expect = 1e-46
Identities = 88/135 (65%), Positives = 92/135 (68%)
Frame = -1
Query: 614 PPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXY 435
P NQMVKCDPR+GKYMA C+LYRGDVVPKDVN +Q VDWCPTGFKVGI Y
Sbjct: 296 PANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINY 355
Query: 434 QPPTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXWXVXXXXXXXX 255
QPPTVVPGG LAKV AVCMLS TTA AE W LD+KFDLM AK A V W V
Sbjct: 356 QPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGE 415
Query: 254 XXXXXXXLAALEKDY 210
LAALEKDY
Sbjct: 416 FTEAREDLAALEKDY 430
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = -2
Query: 724 PRIQFPXXXXTRQLFSAEKAYHEQLSVAEIT 632
PRI FP T L SAEKAYHE LSV +IT
Sbjct: 261 PRIHFPLASYT-PLISAEKAYHEALSVNDIT 290
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 183 bits (445), Expect = 1e-46
Identities = 88/135 (65%), Positives = 91/135 (67%)
Frame = -1
Query: 614 PPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXY 435
P QMVKCDPR GKYMACC+LYRGDVVPKDVN IQ VDWCPTGFKVGI Y
Sbjct: 303 PGAQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVGINY 362
Query: 434 QPPTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXWXVXXXXXXXX 255
QPPTVVPG L+K+Q AVCMLS TTA AE W LDHKFDLM AK A V W V
Sbjct: 363 QPPTVVPGADLSKLQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 422
Query: 254 XXXXXXXLAALEKDY 210
LAALEKDY
Sbjct: 423 FSEAREDLAALEKDY 437
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -2
Query: 724 PRIQFPXXXXTRQLFSAEKAYHEQLSVAEITK 629
PRI FP + SAEKAYHEQ++VAEIT+
Sbjct: 268 PRIHFPLTTYA-PIISAEKAYHEQMTVAEITQ 298
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 183 bits (445), Expect = 1e-46
Identities = 88/135 (65%), Positives = 92/135 (68%)
Frame = -1
Query: 614 PPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXY 435
P NQMVKCDPR+GKYMA C+LYRGDVVPKDVN +Q VDWCPTGFKVGI Y
Sbjct: 296 PANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINY 355
Query: 434 QPPTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXWXVXXXXXXXX 255
QPPTVVPGG LAKV AVCMLS TTA AE W LD+KFDLM AK A V W V
Sbjct: 356 QPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGE 415
Query: 254 XXXXXXXLAALEKDY 210
LAALEKDY
Sbjct: 416 FTEAREDLAALEKDY 430
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = -2
Query: 724 PRIQFPXXXXTRQLFSAEKAYHEQLSVAEIT 632
PRI FP T L SAEKAYHE LSV +IT
Sbjct: 261 PRIHFPLASYT-PLISAEKAYHEALSVNDIT 290
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 182 bits (444), Expect = 2e-46
Identities = 85/135 (62%), Positives = 93/135 (68%)
Frame = -1
Query: 614 PPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXY 435
P +QMVKCDPR+GKYMACC+LYRGDVVPK++N IQ VDWCPTGFKVGI Y
Sbjct: 298 PGSQMVKCDPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVGINY 357
Query: 434 QPPTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXWXVXXXXXXXX 255
QPPTVVPGG +AK+Q AVCMLS TTA E W LDHKFDLM AK A V W V
Sbjct: 358 QPPTVVPGGDMAKLQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 254 XXXXXXXLAALEKDY 210
+AALEKDY
Sbjct: 418 FSEAREDMAALEKDY 432
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -2
Query: 724 PRIQFPXXXXTRQLFSAEKAYHEQLSVAEIT 632
PRI FP + SAEKAYHEQLSV+EIT
Sbjct: 263 PRIHFPLVTYA-PIISAEKAYHEQLSVSEIT 292
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 178 bits (433), Expect = 4e-45
Identities = 83/133 (62%), Positives = 91/133 (68%)
Frame = -1
Query: 608 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXYQP 429
NQMVKCDP+HGKYMA C+LYRGDVVPKDV+ +Q VDWCPTGFKVG+ YQP
Sbjct: 295 NQMVKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVGLNYQP 354
Query: 428 PTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXWXVXXXXXXXXXX 249
PTV+PGG +AKV AVCMLS TTA AE W LD+KFDLM AK A V W V
Sbjct: 355 PTVIPGGDMAKVPRAVCMLSNTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFS 414
Query: 248 XXXXXLAALEKDY 210
LAALEKDY
Sbjct: 415 EAREDLAALEKDY 427
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 172 bits (419), Expect = 2e-43
Identities = 81/135 (60%), Positives = 88/135 (65%)
Frame = -1
Query: 614 PPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXY 435
P QMVKCDPR GKYMA C+LYRGDVVPKD+N +Q V+WCPTGFKVGI Y
Sbjct: 304 PGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINY 363
Query: 434 QPPTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXWXVXXXXXXXX 255
QPPTVVPGG L K +VCM+S TTA AE W LDHKFDLM AK A V W V
Sbjct: 364 QPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 423
Query: 254 XXXXXXXLAALEKDY 210
+AALEKDY
Sbjct: 424 FSEAREDMAALEKDY 438
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -2
Query: 724 PRIQFPXXXXTRQLFSAEKAYHEQLSVAEIT 632
PRI FP L SAE+A HEQ +V+++T
Sbjct: 269 PRIHFPLVTYA-PLVSAERASHEQNTVSDMT 298
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 172 bits (419), Expect = 2e-43
Identities = 81/135 (60%), Positives = 88/135 (65%)
Frame = -1
Query: 614 PPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXY 435
P QMVKCDPR GKYMA C+LYRGDVVPKD+N +Q V+WCPTGFKVGI Y
Sbjct: 276 PGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINY 335
Query: 434 QPPTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXWXVXXXXXXXX 255
QPPTVVPGG L K +VCM+S TTA AE W LDHKFDLM AK A V W V
Sbjct: 336 QPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 395
Query: 254 XXXXXXXLAALEKDY 210
+AALEKDY
Sbjct: 396 FSEAREDMAALEKDY 410
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -2
Query: 724 PRIQFPXXXXTRQLFSAEKAYHEQLSVAEIT 632
PRI FP L SAE+A HEQ +V+++T
Sbjct: 241 PRIHFPLVTYA-PLVSAERASHEQNTVSDMT 270
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 166 bits (403), Expect = 2e-41
Identities = 82/133 (61%), Positives = 84/133 (63%)
Frame = -1
Query: 608 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXYQP 429
NQMVKCDP GKYMA C+LYRGDVVPKDVN I VDWCPTGFKVGI YQ
Sbjct: 303 NQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQA 362
Query: 428 PTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXWXVXXXXXXXXXX 249
P V GG LAKV AVCMLS TTA AE W LDHKFDLM +K A V W V
Sbjct: 363 PITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFM 422
Query: 248 XXXXXLAALEKDY 210
LAALEKDY
Sbjct: 423 EARDDLAALEKDY 435
Score = 32.7 bits (71), Expect = 0.31
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = -2
Query: 724 PRIQFPXXXXTRQLFSAEKAYHEQLSVAEITKXMXXARQTRW*NATPVMASTWLAVC 554
PRI FP + SA++A+HE LSV +IT M + + P A ++AVC
Sbjct: 266 PRIHFPLATYA-PVISADRAHHEPLSVQDIT-HMCFEKANQMVKCDP-SAGKYMAVC 319
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 62.5 bits (145), Expect = 3e-10
Identities = 32/58 (55%), Positives = 33/58 (56%)
Frame = -1
Query: 383 VCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXWXVXXXXXXXXXXXXXXXLAALEKDY 210
VCMLS TTA AE W LD+KFDLM AK A V W V LAALEKDY
Sbjct: 10 VCMLSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDY 67
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/108 (25%), Positives = 45/108 (41%)
Frame = -1
Query: 608 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXYQP 429
N M CDPRHG+Y+ ++RG + K+V+ V+W P K + P
Sbjct: 298 NMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIP 357
Query: 428 PTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXW 285
P V+ A + +TA E + + +F M + A + W
Sbjct: 358 P--------RGVKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHW 397
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 51.6 bits (118), Expect = 6e-07
Identities = 27/108 (25%), Positives = 45/108 (41%)
Frame = -1
Query: 608 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXYQP 429
N M CDPRHG+Y+ ++RG + K+V+ VDW P K + P
Sbjct: 298 NMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIP 357
Query: 428 PTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXW 285
P ++ + + +TA E + + +F M + A + W
Sbjct: 358 P--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHW 397
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 51.6 bits (118), Expect = 6e-07
Identities = 27/108 (25%), Positives = 45/108 (41%)
Frame = -1
Query: 608 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXYQP 429
N M CDPRHG+Y+ ++RG + K+V+ VDW P K + P
Sbjct: 298 NMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIP 357
Query: 428 PTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXW 285
P ++ + + +TA E + + +F M + A + W
Sbjct: 358 P--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHW 397
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/108 (24%), Positives = 45/108 (41%)
Frame = -1
Query: 608 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXYQP 429
N M CDPRHG+Y+ ++RG + ++V+ V+W P K + P
Sbjct: 298 NMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDIP 357
Query: 428 PTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXW 285
P ++ A + +TA E + + +F M + A + W
Sbjct: 358 P--------RGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHW 397
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/108 (24%), Positives = 45/108 (41%)
Frame = -1
Query: 608 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXYQP 429
N M CDPRHG+Y+ ++RG + ++V+ V+W P K + P
Sbjct: 298 NMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIP 357
Query: 428 PTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXW 285
P ++ A + +TA E + + +F M + A + W
Sbjct: 358 P--------RGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHW 397
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 48.4 bits (110), Expect = 6e-06
Identities = 25/108 (23%), Positives = 45/108 (41%)
Frame = -1
Query: 608 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNXXXXXXXXXXXIQXVDWCPTGFKVGIXYQP 429
N M CDPRHG+Y+ ++RG + ++V+ V+W P K + P
Sbjct: 298 NMMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNVQNKNSSYFVEWIPNNVKTAVCDIP 357
Query: 428 PTVVPGGXLAKVQXAVCMLSXTTAXAEGWXXLDHKFDLMXAKXAXVXW 285
P ++ + + +TA E + + +F M + A + W
Sbjct: 358 P--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHW 397
>U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine
receptor, class x protein56 protein.
Length = 298
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 141 YFXGLVLFGSLTLAFSGXHADFFVILLEGSQXLTGF 248
YF +VLF T+ H FF++ L LT F
Sbjct: 60 YFCPMVLFDQSTMKQYSHHCGFFILFLSEFSILTHF 95
>AC024824-2|AAK85502.1| 740|Caenorhabditis elegans Hypothetical
protein Y55B1BR.2 protein.
Length = 740
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2
Query: 520 TRPSLPSKPXVLSNXSTGVQPVSRSVSXTSHPPWCPEAXWPRF 392
T PS+PS+P + + V+ +V+ TS P A PRF
Sbjct: 345 TTPSVPSRPPSALSTHSHVETEVAAVATTSAPAEASAAVKPRF 387
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,686,022
Number of Sequences: 27780
Number of extensions: 263429
Number of successful extensions: 669
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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