Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_L19
         (795 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0241 - 26634632-26636263                                         29   5.6  
09_03_0068 + 12047193-12047548,12048302-12048428                       28   7.4  

>05_06_0241 - 26634632-26636263
          Length = 543

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = -2

Query: 560 PWFVRNVDLHDDLXLESIQKYMKSASERYFDKAMRHDNRLIVAAADYSPNPDHAGASHRR 381
           P + R+V LH  +      K + +  +R    AMR+    I    D   + D AG + RR
Sbjct: 104 PRYHRSVQLHKTIAYNGDAKALVATIKRQERLAMRNMAASIGCFLDADDSHDRAGRARRR 163

Query: 380 RPR 372
           R R
Sbjct: 164 RRR 166


>09_03_0068 + 12047193-12047548,12048302-12048428
          Length = 160

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 248 RLHGELFVEFDEYGYRGP*ACS*S*GRL 331
           RLHG+LF      GY+GP + + S G+L
Sbjct: 29  RLHGKLFPPLSSTGYQGPPSWTVSAGKL 56


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,973,772
Number of Sequences: 37544
Number of extensions: 304760
Number of successful extensions: 703
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)