Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_L19
         (795 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown prot...    48   1e-05
AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p pro...    36   0.048
M22874-2|AAA28675.1|  916|Drosophila melanogaster protein ( D.me...    34   0.26 
AY089343-1|AAL90081.2|  718|Drosophila melanogaster AT16518p pro...    34   0.26 
X17551-2|CAA35587.1|  888|Drosophila melanogaster protein ( D.me...    33   0.34 
AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p pro...    33   0.34 

>AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown protein.
          Length = 908

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 29/73 (39%), Positives = 41/73 (56%)
 Frame = -2

Query: 557  WFVRNVDLHDDLXLESIQKYMKSASERYFDKAMRHDNRLIVAAADYSPNPDHAGASHRRR 378
            WFVRN  LH DL L ++   +   S RY D+  RH NRL  +A + S  P      +RR+
Sbjct: 837  WFVRNTTLHRDLKLATVFDEINKHSSRYHDRLERHRNRL-ASALNRSRPPRRL---NRRQ 892

Query: 377  PRHVLTDLSNPIT 339
            PR ++T   +P+T
Sbjct: 893  PRDLIT--RSPLT 903


>AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p
           protein.
          Length = 906

 Score = 36.3 bits (80), Expect = 0.048
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = -2

Query: 569 SEXPWFVRNVDLHDDLXLESIQKYMKSASERYFDKAMRHDNRL 441
           ++ P++VR   LH DL L ++++ +   + RY D+  RH + L
Sbjct: 839 TDCPYYVRGTTLHRDLNLHTVEEQISRHTSRYSDRLRRHHSIL 881


>M22874-2|AAA28675.1|  916|Drosophila melanogaster protein (
            D.melanogaster LINEelement J-1, clone J-1. ).
          Length = 916

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = -2

Query: 569  SEXPWFVRNVDLHDDLXLESIQKYMKSASERYFDKAMRHDNRLIVAAADYS-PNPDHAGA 393
            S  PW++R  D+  DL +  +   +++ +++Y ++   H N L       +  N D    
Sbjct: 838  SGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYMERLNVHPNSLARKLGTAAVVNADPRTR 897

Query: 392  SHRRRPRHVLTDLSN 348
              RR  RH   DL N
Sbjct: 898  VKRRLKRHHPHDLPN 912


>AY089343-1|AAL90081.2|  718|Drosophila melanogaster AT16518p
           protein.
          Length = 718

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = -2

Query: 569 SEXPWFVRNVDLHDDLXLESIQKYMKSASERYFDKAMRHDNRLIVAAADYS-PNPDHAGA 393
           S  PW++R  D+  DL +  +   +++ +++Y ++   H N L       +  N D    
Sbjct: 640 SGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYLERLNVHPNSLARKLGTAAVVNADPRTR 699

Query: 392 SHRRRPRHVLTDLSN 348
             RR  RH   DL N
Sbjct: 700 VKRRLKRHHPHDLPN 714


>X17551-2|CAA35587.1|  888|Drosophila melanogaster protein (
           D.melanogaster white-one mutant DNA with Doc retroposon,
           inserted inwhite locuspromoter region.  ).
          Length = 888

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -2

Query: 560 PWFVRNVDLHDDLXLESIQKYMKSASERYFDKAMRHDNRL 441
           PW++RN ++H DL ++ + + +     +Y +K   H N L
Sbjct: 827 PWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866


>AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p
           protein.
          Length = 888

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -2

Query: 560 PWFVRNVDLHDDLXLESIQKYMKSASERYFDKAMRHDNRL 441
           PW++RN ++H DL ++ + + +     +Y +K   H N L
Sbjct: 827 PWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,673,224
Number of Sequences: 53049
Number of extensions: 489000
Number of successful extensions: 1028
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)