Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_L15
         (836 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05273-1|CAA28885.1|  576|Drosophila melanogaster protein ( Dros...    29   6.0  
BT016097-1|AAV36982.1|  576|Drosophila melanogaster LD31887p pro...    29   6.0  
AY089423-1|AAL90161.1|  576|Drosophila melanogaster AT24588p pro...    29   6.0  
AE013599-1318|AAM68708.3|  576|Drosophila melanogaster CG17835-P...    29   6.0  
AE013599-1317|AAM68707.3|  576|Drosophila melanogaster CG17835-P...    29   6.0  
AE013599-1316|AAF58640.3|  576|Drosophila melanogaster CG17835-P...    29   6.0  
AE013599-1315|AAM68709.2|  576|Drosophila melanogaster CG17835-P...    29   6.0  

>X05273-1|CAA28885.1|  576|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for invected gene (60kD
           protein). ).
          Length = 576

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 541 FQNKQLNXRKKFNFPTKNPXALKTRQNNIYNPST 642
           FQNK+   +K     TKNP AL+     +YN ST
Sbjct: 519 FQNKRAKLKKSSG--TKNPLALQLMAQGLYNHST 550


>BT016097-1|AAV36982.1|  576|Drosophila melanogaster LD31887p
           protein.
          Length = 576

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 541 FQNKQLNXRKKFNFPTKNPXALKTRQNNIYNPST 642
           FQNK+   +K     TKNP AL+     +YN ST
Sbjct: 519 FQNKRAKLKKSSG--TKNPLALQLMAQGLYNHST 550


>AY089423-1|AAL90161.1|  576|Drosophila melanogaster AT24588p
           protein.
          Length = 576

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 541 FQNKQLNXRKKFNFPTKNPXALKTRQNNIYNPST 642
           FQNK+   +K     TKNP AL+     +YN ST
Sbjct: 519 FQNKRAKLKKSSG--TKNPLALQLMAQGLYNHST 550


>AE013599-1318|AAM68708.3|  576|Drosophila melanogaster CG17835-PD,
           isoform D protein.
          Length = 576

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 541 FQNKQLNXRKKFNFPTKNPXALKTRQNNIYNPST 642
           FQNK+   +K     TKNP AL+     +YN ST
Sbjct: 519 FQNKRAKLKKSSG--TKNPLALQLMAQGLYNHST 550


>AE013599-1317|AAM68707.3|  576|Drosophila melanogaster CG17835-PC,
           isoform C protein.
          Length = 576

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 541 FQNKQLNXRKKFNFPTKNPXALKTRQNNIYNPST 642
           FQNK+   +K     TKNP AL+     +YN ST
Sbjct: 519 FQNKRAKLKKSSG--TKNPLALQLMAQGLYNHST 550


>AE013599-1316|AAF58640.3|  576|Drosophila melanogaster CG17835-PB,
           isoform B protein.
          Length = 576

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 541 FQNKQLNXRKKFNFPTKNPXALKTRQNNIYNPST 642
           FQNK+   +K     TKNP AL+     +YN ST
Sbjct: 519 FQNKRAKLKKSSG--TKNPLALQLMAQGLYNHST 550


>AE013599-1315|AAM68709.2|  576|Drosophila melanogaster CG17835-PA,
           isoform A protein.
          Length = 576

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 541 FQNKQLNXRKKFNFPTKNPXALKTRQNNIYNPST 642
           FQNK+   +K     TKNP AL+     +YN ST
Sbjct: 519 FQNKRAKLKKSSG--TKNPLALQLMAQGLYNHST 550


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,023,403
Number of Sequences: 53049
Number of extensions: 449795
Number of successful extensions: 862
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)