Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_L11
(855 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X74796-1|CAA52803.1| 617|Homo sapiens p85Mcm protein protein. 97 9e-20
D55716-1|BAA09534.1| 719|Homo sapiens P1cdc47 protein. 97 9e-20
D28480-1|BAA05839.1| 543|Homo sapiens hMCM2 protein. 97 9e-20
BC013375-1|AAH13375.1| 719|Homo sapiens minichromosome maintena... 97 9e-20
AY007130-1|AAG01994.1| 351|Homo sapiens protein ( Homo sapiens ... 97 9e-20
BC009398-1|AAH09398.1| 389|Homo sapiens MCM7 protein protein. 62 2e-09
AF093119-1|AAC62108.1| 439|Homo sapiens UPH1 protein. 32 2.3
X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1) ribonucleopro... 30 9.3
X07401-1|CAA30303.1| 285|Homo sapiens hU1-70K protein (286 AA) ... 30 9.3
X06816-1|CAA29965.1| 117|Homo sapiens hU1-70K protein (118 AA) ... 30 9.3
X06814-1|CAA29963.1| 233|Homo sapiens protein ( Human mRNA for ... 30 9.3
X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for ... 30 9.3
M57939-2|AAA36573.1| 428|Homo sapiens ribonucleoprotein antigen... 30 9.3
M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen... 30 9.3
M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small ... 30 9.3
BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear ribonucle... 30 9.3
BC000342-1|AAH00342.1| 122|Homo sapiens SNRP70 protein protein. 30 9.3
AL117507-1|CAB55969.1| 341|Homo sapiens hypothetical protein pr... 30 9.3
AL117399-1|CAB55900.1| 122|Homo sapiens hypothetical protein pr... 30 9.3
>X74796-1|CAA52803.1| 617|Homo sapiens p85Mcm protein protein.
Length = 617
Score = 96.7 bits (230), Expect = 9e-20
Identities = 48/92 (52%), Positives = 61/92 (66%)
Frame = -2
Query: 440 RLRLSDVVEKEDVXEAIRLVEMSKQSLQHVEEXVQRGITSTDRIFAIVRDLAGSNKTVKV 261
RLR+ DVVEKEDV EAIRL+EMSK SL + R D IFA VR+L ++V+
Sbjct: 516 RLRMVDVVEKEDVNEAIRLMEMSKDSLLGDKGQTARTQRPADVIFATVRELVSGGRSVRF 575
Query: 260 ADVIERCVDKGFKPDQVDACIEEYENLNVWQV 165
++ +RCV +GF P Q A ++EYE LNVWQV
Sbjct: 576 SEAEQRCVSRGFTPAQFQAALDEYEELNVWQV 607
>D55716-1|BAA09534.1| 719|Homo sapiens P1cdc47 protein.
Length = 719
Score = 96.7 bits (230), Expect = 9e-20
Identities = 48/92 (52%), Positives = 61/92 (66%)
Frame = -2
Query: 440 RLRLSDVVEKEDVXEAIRLVEMSKQSLQHVEEXVQRGITSTDRIFAIVRDLAGSNKTVKV 261
RLR+ DVVEKEDV EAIRL+EMSK SL + R D IFA VR+L ++V+
Sbjct: 618 RLRMVDVVEKEDVNEAIRLMEMSKDSLLGDKGQTARTQRPADVIFATVRELVSGGRSVRF 677
Query: 260 ADVIERCVDKGFKPDQVDACIEEYENLNVWQV 165
++ +RCV +GF P Q A ++EYE LNVWQV
Sbjct: 678 SEAEQRCVSRGFTPAQFQAALDEYEELNVWQV 709
>D28480-1|BAA05839.1| 543|Homo sapiens hMCM2 protein.
Length = 543
Score = 96.7 bits (230), Expect = 9e-20
Identities = 48/92 (52%), Positives = 61/92 (66%)
Frame = -2
Query: 440 RLRLSDVVEKEDVXEAIRLVEMSKQSLQHVEEXVQRGITSTDRIFAIVRDLAGSNKTVKV 261
RLR+ DVVEKEDV EAIRL+EMSK SL + R D IFA VR+L ++V+
Sbjct: 442 RLRMVDVVEKEDVNEAIRLMEMSKDSLLGDKGQTARTQRPADVIFATVRELVSGGRSVRF 501
Query: 260 ADVIERCVDKGFKPDQVDACIEEYENLNVWQV 165
++ +RCV +GF P Q A ++EYE LNVWQV
Sbjct: 502 SEAEQRCVSRGFTPAQFQAALDEYEELNVWQV 533
>BC013375-1|AAH13375.1| 719|Homo sapiens minichromosome maintenance
complex component 7 protein.
Length = 719
Score = 96.7 bits (230), Expect = 9e-20
Identities = 48/92 (52%), Positives = 61/92 (66%)
Frame = -2
Query: 440 RLRLSDVVEKEDVXEAIRLVEMSKQSLQHVEEXVQRGITSTDRIFAIVRDLAGSNKTVKV 261
RLR+ DVVEKEDV EAIRL+EMSK SL + R D IFA VR+L ++V+
Sbjct: 618 RLRMVDVVEKEDVNEAIRLMEMSKDSLLGDKGQTARTQRPADVIFATVRELVSGGRSVRF 677
Query: 260 ADVIERCVDKGFKPDQVDACIEEYENLNVWQV 165
++ +RCV +GF P Q A ++EYE LNVWQV
Sbjct: 678 SEAEQRCVSRGFTPAQFQAALDEYEELNVWQV 709
>AY007130-1|AAG01994.1| 351|Homo sapiens protein ( Homo sapiens
clone CDABP0042 mRNA sequence. ).
Length = 351
Score = 96.7 bits (230), Expect = 9e-20
Identities = 48/92 (52%), Positives = 61/92 (66%)
Frame = -2
Query: 440 RLRLSDVVEKEDVXEAIRLVEMSKQSLQHVEEXVQRGITSTDRIFAIVRDLAGSNKTVKV 261
RLR+ DVVEKEDV EAIRL+EMSK SL + R D IFA VR+L ++V+
Sbjct: 250 RLRMVDVVEKEDVNEAIRLMEMSKDSLLGDKGQTARTQRPADVIFATVRELVSGGRSVRF 309
Query: 260 ADVIERCVDKGFKPDQVDACIEEYENLNVWQV 165
++ +RCV +GF P Q A ++EYE LNVWQV
Sbjct: 310 SEAEQRCVSRGFTPAQFQAALDEYEELNVWQV 341
>BC009398-1|AAH09398.1| 389|Homo sapiens MCM7 protein protein.
Length = 389
Score = 62.5 bits (145), Expect = 2e-09
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Frame = -2
Query: 410 EDVXEAIRLVEMSKQSLQH--VEEXVQRGITS-TDRIFAIVRDLAGSNKTVKVADVIERC 240
E EA R+V+M+K E + + D IFA VR+L ++V+ ++ +RC
Sbjct: 295 ETYLEAHRIVKMNKSEDDESGAGELTREELRQIADVIFATVRELVSGGRSVRFSEAEQRC 354
Query: 239 VDKGFKPDQVDACIEEYENLNVWQV 165
V +GF P Q A ++EYE LNVWQV
Sbjct: 355 VSRGFTPAQFQAALDEYEELNVWQV 379
>AF093119-1|AAC62108.1| 439|Homo sapiens UPH1 protein.
Length = 439
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = -2
Query: 407 DVXEAIRLVEMSKQSLQHVEEXVQRGITSTDRIFAIVRDLAGSNKTVKVADVIERCVDKG 228
DV E + + E K ++ + G R A++ DL G V V + + G
Sbjct: 51 DVNECLTIPEACKGEMKCINHY--GGYLCLPRSAAVINDLHGEGPPPPVPPVNTQPLPTG 108
Query: 227 FKPDQVDACIE 195
++PD D+C++
Sbjct: 109 YEPDDQDSCVD 119
>X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1)
ribonucleoprotein protein.
Length = 437
Score = 30.3 bits (65), Expect = 9.3
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -1
Query: 318 GPYIRDSARPGRLQQDRQSRRCH---REVRRQRIQTRSGGRLHRR-IRELERVASEARCG 151
GP D +DR+ RR H RE RR R + R R H+R R ER EAR G
Sbjct: 336 GPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEARGG 395
>X07401-1|CAA30303.1| 285|Homo sapiens hU1-70K protein (286 AA)
protein.
Length = 285
Score = 30.3 bits (65), Expect = 9.3
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -1
Query: 318 GPYIRDSARPGRLQQDRQSRRCH---REVRRQRIQTRSGGRLHRR-IRELERVASEARCG 151
GP D +DR+ RR H RE RR R + R R H+R R ER EAR G
Sbjct: 184 GPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEARGG 243
>X06816-1|CAA29965.1| 117|Homo sapiens hU1-70K protein (118 AA)
protein.
Length = 117
Score = 30.3 bits (65), Expect = 9.3
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -1
Query: 318 GPYIRDSARPGRLQQDRQSRRCH---REVRRQRIQTRSGGRLHRR-IRELERVASEARCG 151
GP D +DR+ RR H RE RR R + R R H+R R ER EAR G
Sbjct: 16 GPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEARGG 75
>X06814-1|CAA29963.1| 233|Homo sapiens protein ( Human mRNA for
hU1-70K small nuclear RNP protein (RNP12). ).
Length = 233
Score = 30.3 bits (65), Expect = 9.3
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -1
Query: 318 GPYIRDSARPGRLQQDRQSRRCH---REVRRQRIQTRSGGRLHRR-IRELERVASEARCG 151
GP D +DR+ RR H RE RR R + R R H+R R ER EAR G
Sbjct: 151 GPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEARGG 210
>X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for U1
RNA-associated 70K protein. ).
Length = 614
Score = 30.3 bits (65), Expect = 9.3
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -1
Query: 318 GPYIRDSARPGRLQQDRQSRRCH---REVRRQRIQTRSGGRLHRR-IRELERVASEARCG 151
GP D +DR+ RR H RE RR R + R R H+R R ER EAR G
Sbjct: 513 GPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEARGG 572
>M57939-2|AAA36573.1| 428|Homo sapiens ribonucleoprotein antigen
protein.
Length = 428
Score = 30.3 bits (65), Expect = 9.3
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -1
Query: 318 GPYIRDSARPGRLQQDRQSRRCH---REVRRQRIQTRSGGRLHRR-IRELERVASEARCG 151
GP D +DR+ RR H RE RR R + R R H+R R ER EAR G
Sbjct: 327 GPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEARGG 386
>M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen
protein.
Length = 437
Score = 30.3 bits (65), Expect = 9.3
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -1
Query: 318 GPYIRDSARPGRLQQDRQSRRCH---REVRRQRIQTRSGGRLHRR-IRELERVASEARCG 151
GP D +DR+ RR H RE RR R + R R H+R R ER EAR G
Sbjct: 336 GPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEARGG 395
>M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small
nuclear ribonucleoprotein 70 kd protein mRNA, complete
cds. ).
Length = 437
Score = 30.3 bits (65), Expect = 9.3
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -1
Query: 318 GPYIRDSARPGRLQQDRQSRRCH---REVRRQRIQTRSGGRLHRR-IRELERVASEARCG 151
GP D +DR+ RR H RE RR R + R R H+R R ER EAR G
Sbjct: 336 GPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEARGG 395
>BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear
ribonucleoprotein 70kDa polypeptide (RNP antigen)
protein.
Length = 437
Score = 30.3 bits (65), Expect = 9.3
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -1
Query: 318 GPYIRDSARPGRLQQDRQSRRCH---REVRRQRIQTRSGGRLHRR-IRELERVASEARCG 151
GP D +DR+ RR H RE RR R + R R H+R R ER EAR G
Sbjct: 336 GPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEARGG 395
>BC000342-1|AAH00342.1| 122|Homo sapiens SNRP70 protein protein.
Length = 122
Score = 30.3 bits (65), Expect = 9.3
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -1
Query: 318 GPYIRDSARPGRLQQDRQSRRCH---REVRRQRIQTRSGGRLHRR-IRELERVASEARCG 151
GP D +DR+ RR H RE RR R + R R H+R R ER EAR G
Sbjct: 21 GPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEARGG 80
>AL117507-1|CAB55969.1| 341|Homo sapiens hypothetical protein
protein.
Length = 341
Score = 30.3 bits (65), Expect = 9.3
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -1
Query: 318 GPYIRDSARPGRLQQDRQSRRCH---REVRRQRIQTRSGGRLHRR-IRELERVASEARCG 151
GP D +DR+ RR H RE RR R + R R H+R R ER EAR G
Sbjct: 240 GPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEARGG 299
>AL117399-1|CAB55900.1| 122|Homo sapiens hypothetical protein
protein.
Length = 122
Score = 30.3 bits (65), Expect = 9.3
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -1
Query: 318 GPYIRDSARPGRLQQDRQSRRCH---REVRRQRIQTRSGGRLHRR-IRELERVASEARCG 151
GP D +DR+ RR H RE RR R + R R H+R R ER EAR G
Sbjct: 21 GPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEARGG 80
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,832,461
Number of Sequences: 237096
Number of extensions: 1756317
Number of successful extensions: 4605
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4605
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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