Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_L10
         (784 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.6  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    22   7.4  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    21   9.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +2

Query: 86  GKFFFFLHK 112
           G+F+FFLHK
Sbjct: 255 GEFYFFLHK 263


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +2

Query: 86  GKFFFFLHK 112
           G+F+FFLHK
Sbjct: 255 GEFYFFLHK 263


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/43 (23%), Positives = 20/43 (46%)
 Frame = +3

Query: 213 KKKHPTKSSRNFTGLLMKNYLTLINIISRSPNICIYVTHNLNY 341
           K++      R     L  NY++ I+  + + N    + +N+NY
Sbjct: 70  KRERERSKERKIISSLSNNYISNISNYNNNNNYNKKLYYNINY 112


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/43 (23%), Positives = 19/43 (44%)
 Frame = +3

Query: 213 KKKHPTKSSRNFTGLLMKNYLTLINIISRSPNICIYVTHNLNY 341
           K++      R     L  NY++ I+  +   N    + +N+NY
Sbjct: 70  KRERERSKERKIISSLSNNYISNISNYNNDNNYNKKLYYNINY 112


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,374
Number of Sequences: 438
Number of extensions: 4140
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)