Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_L09
         (788 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    27   0.66 
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    25   3.5  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    24   4.7  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    24   4.7  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 27.1 bits (57), Expect = 0.66
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = -2

Query: 694 NTXGESNYHLLESVQXSLXRRFGRVGGRIPVTPSESFQKRSPAPPRRTSCTPDSTT-PWR 518
           N   E+N+ LLE    S  +    V  ++    ++S  K S A     + TPD    P+R
Sbjct: 743 NNDREANFRLLEDAYQSAKKTLANVEKKLAEVKAKSSDKNSTARALCANKTPDKPDFPYR 802


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 468 RSEDSRVCELHRKDIHHVCRCR 403
           RS D R+   HRK + HV  CR
Sbjct: 83  RSLDGRLQVSHRKGLPHVIYCR 104


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 583 QKRSPAPPRRTSCTPDS 533
           Q+ S  P R ++CTPDS
Sbjct: 132 QQNSSVPVRPSACTPDS 148


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 583 QKRSPAPPRRTSCTPDS 533
           Q+ S  P R ++CTPDS
Sbjct: 132 QQNSSVPVRPSACTPDS 148


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,474
Number of Sequences: 2352
Number of extensions: 16518
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)