Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_L09
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical pr... 118 5e-27
Z81513-5|CAB04175.1| 332|Caenorhabditis elegans Hypothetical pr... 33 0.23
U29613-3|AAC47062.2| 483|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 29 2.9
Z81032-5|CAL36491.1| 597|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z81032-2|CAD88213.1| 558|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z81032-1|CAB02719.1| 535|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p... 29 5.0
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr... 29 5.0
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase... 29 5.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 6.6
>Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical
protein ZK829.4 protein.
Length = 536
Score = 118 bits (284), Expect = 5e-27
Identities = 62/133 (46%), Positives = 83/133 (62%), Gaps = 1/133 (0%)
Frame = -1
Query: 788 VPXLXINXGG-SPSHFWVXQDLNHVXYGRLTFKYEXGI*LPSAGIXXXXXXXXXXXXXXP 612
+P + +N GG + S+F ++LNHV YGRLTFKY+ + +
Sbjct: 406 IPDMYVNSGGVTVSYFEWLKNLNHVSYGRLTFKYDEEA---NKMLLASVQESLSKAVGKD 462
Query: 611 HPRHSLRVLPEEISGASEKDIVHSGLDYTMERSARAIMKTAMRFNLGLDLRTAAYANSIE 432
P +I+GASEKDIVHSGL+YTM+RS AI++TA ++NLGLD+RTAAYANSIE
Sbjct: 463 CPVEPNAAFAAKIAGASEKDIVHSGLEYTMQRSGEAIIRTAHKYNLGLDIRTAAYANSIE 522
Query: 431 KIFTTYADAGLAF 393
K++ TY AG F
Sbjct: 523 KVYNTYRTAGFTF 535
>Z81513-5|CAB04175.1| 332|Caenorhabditis elegans Hypothetical
protein F26D2.4 protein.
Length = 332
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -1
Query: 278 TVRSRHEIKPLG*FYSYCLHFIHFDLIPVHVNFTYKRHCNHSIFL-CVEIMAFYLNLSET 102
T RH FY+Y LHF+ IP+H+ TY I + V++ L+L+
Sbjct: 2 TCTYRHSFLESDEFYAYSLHFLSIFQIPLHIFGTYIVLFKTPIHMERVKLSMLVLHLTFA 61
Query: 101 LLNIYVKI 78
L++Y+ I
Sbjct: 62 WLDVYLTI 69
>U29613-3|AAC47062.2| 483|Caenorhabditis elegans Hypothetical
protein K02A6.3a protein.
Length = 483
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 457 VLRSKPRLNLMAVFMMALADLSMV*SSPECTMSFSEAPEISSGRTLRE*RGCGLPR 624
+LR KP+++L+ + + M S+ + TM +E G TLR CGL R
Sbjct: 312 ILRGKPKMSLIIQPGAPIYGIKMENSAGQLTMELAEQIANYYGATLRHFIQCGLER 367
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 616 GRIPVTPSESFQKR--SPAPPRRTSCTPDSTTP 524
G P TPSES R SPAP ++ TP S+ P
Sbjct: 324 GSSPKTPSESGGSRAASPAPRAQSPATPSSSLP 356
>Z81032-5|CAL36491.1| 597|Caenorhabditis elegans Hypothetical
protein C02F4.2c protein.
Length = 597
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -2
Query: 670 HLLESVQXSLXRRFGRVGGRIP---VTPSESFQKRSPAPPRRTSCTPDSTTP 524
HL++S + + RR ++ R+P TP +SP P R+T+ P P
Sbjct: 545 HLIQSFEEA--RRLDKINERMPPTMATPPAQSPSQSPIPSRQTTPQPPQNGP 594
>Z81032-2|CAD88213.1| 558|Caenorhabditis elegans Hypothetical
protein C02F4.2b protein.
Length = 558
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -2
Query: 670 HLLESVQXSLXRRFGRVGGRIP---VTPSESFQKRSPAPPRRTSCTPDSTTP 524
HL++S + + RR ++ R+P TP +SP P R+T+ P P
Sbjct: 506 HLIQSFEEA--RRLDKINERMPPTMATPPAQSPSQSPIPSRQTTPQPPQNGP 555
>Z81032-1|CAB02719.1| 535|Caenorhabditis elegans Hypothetical
protein C02F4.2a protein.
Length = 535
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -2
Query: 670 HLLESVQXSLXRRFGRVGGRIP---VTPSESFQKRSPAPPRRTSCTPDSTTP 524
HL++S + + RR ++ R+P TP +SP P R+T+ P P
Sbjct: 483 HLIQSFEEA--RRLDKINERMPPTMATPPAQSPSQSPIPSRQTTPQPPQNGP 532
>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +2
Query: 263 VVISLYCKMKEINIGLNLRSTLEFLRKYYTDNTLKLVFSK*IIRKLDRHRHTW*ISFRWS 442
V++ C ++N G ++ L RK D T K ++ R L ++ + W RW
Sbjct: 1786 VLVEETCDDPKLNQGQSMLQALSLARKRSNDLTPKYPNNRTTSRVLGQNENVWKAQSRWK 1845
Query: 443 SHTR 454
S R
Sbjct: 1846 SMGR 1849
>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical protein
F31B12.1a protein.
Length = 1898
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +2
Query: 263 VVISLYCKMKEINIGLNLRSTLEFLRKYYTDNTLKLVFSK*IIRKLDRHRHTW*ISFRWS 442
V++ C ++N G ++ L RK D T K ++ R L ++ + W RW
Sbjct: 1786 VLVEETCDDPKLNQGQSMLQALSLARKRSNDLTPKYPNNRTTSRVLGQNENVWKAQSRWK 1845
Query: 443 SHTR 454
S R
Sbjct: 1846 SMGR 1849
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 528 HHGEIR*GHHEDSHEVQPRFRSEDSRVCELHRKDIHH 418
HHG + HHE+SH + + E H + HH
Sbjct: 42 HHGHVDTHHHEESHHGEHHGGHHGVQHYESHHESHHH 78
>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
PLC210 protein.
Length = 1898
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +2
Query: 263 VVISLYCKMKEINIGLNLRSTLEFLRKYYTDNTLKLVFSK*IIRKLDRHRHTW*ISFRWS 442
V++ C ++N G ++ L RK D T K ++ R L ++ + W RW
Sbjct: 1786 VLVEETCDDPKLNQGQSMLQALSLARKRSNDLTPKYPNNRTTSRVLGQNENVWKAQSRWK 1845
Query: 443 SHTR 454
S R
Sbjct: 1846 SMGR 1849
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/55 (38%), Positives = 22/55 (40%), Gaps = 6/55 (10%)
Frame = -2
Query: 634 RFGRVGGRIPVTPSESFQKRSP----APPRRTSCTPDS--TTPWRDPLGPS*RQP 488
R R GG P P R+P PPRR TP S P R P P R P
Sbjct: 129 RKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNP 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,642,500
Number of Sequences: 27780
Number of extensions: 350927
Number of successful extensions: 937
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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