Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_L07
(784 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 73 3e-13
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 73 3e-13
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 73 3e-13
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 73 3e-13
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 72 4e-13
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 72 4e-13
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 42 4e-04
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 42 4e-04
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 33 0.17
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 33 0.17
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 33 0.17
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 33 0.17
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 33 0.17
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 33 0.17
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 33 0.23
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 33 0.23
AF022976-4|AAC69083.2| 345|Caenorhabditis elegans Serpentine re... 33 0.30
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 32 0.53
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 32 0.53
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 32 0.53
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 32 0.53
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 32 0.53
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 32 0.53
Z93397-3|CAB07720.2| 376|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 28 6.6
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 72.5 bits (170), Expect = 3e-13
Identities = 38/51 (74%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = -1
Query: 739 QELXKRXSXQFTXG-SGAXFXALYTGEGMDEMEFTEAESNMNDLVSEYQQY 590
QEL KR S QFT F YTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 72.5 bits (170), Expect = 3e-13
Identities = 38/51 (74%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = -1
Query: 739 QELXKRXSXQFTXG-SGAXFXALYTGEGMDEMEFTEAESNMNDLVSEYQQY 590
QEL KR S QFT F YTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 72.5 bits (170), Expect = 3e-13
Identities = 38/51 (74%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = -1
Query: 739 QELXKRXSXQFTXG-SGAXFXALYTGEGMDEMEFTEAESNMNDLVSEYQQY 590
QEL KR S QFT F YTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 72.5 bits (170), Expect = 3e-13
Identities = 38/51 (74%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = -1
Query: 739 QELXKRXSXQFTXG-SGAXFXALYTGEGMDEMEFTEAESNMNDLVSEYQQY 590
QEL KR S QFT F YTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 72.1 bits (169), Expect = 4e-13
Identities = 37/51 (72%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = -1
Query: 739 QELXKRXSXQFTXG-SGAXFXALYTGEGMDEMEFTEAESNMNDLVSEYQQY 590
QEL KR S QFT F YTGEGMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQY 425
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 72.1 bits (169), Expect = 4e-13
Identities = 37/51 (72%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = -1
Query: 739 QELXKRXSXQFTXG-SGAXFXALYTGEGMDEMEFTEAESNMNDLVSEYQQY 590
QEL KR S QFT F YTGEGMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQY 425
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -1
Query: 739 QELXKRXSXQFTX-GSGAXFXALYTGEGMDEMEFTEAESNMNDLVSEYQQY 590
QE KR S QF F YT M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 373 QEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQY 420
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -1
Query: 739 QELXKRXSXQFTX-GSGAXFXALYTGEGMDEMEFTEAESNMNDLVSEYQQY 590
QE KR S QF F YT M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 373 QEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQY 420
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 685 FXALYTGEGMDEMEFTEAESNMNDLVSEYQQ 593
F Y GEGM+E EFTEA ++ L +Y++
Sbjct: 402 FVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 685 FXALYTGEGMDEMEFTEAESNMNDLVSEYQQ 593
F Y GEGM+E EFTEA ++ L +Y++
Sbjct: 402 FVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 685 FXALYTGEGMDEMEFTEAESNMNDLVSEYQQ 593
F Y GEGM+E EFTEA ++ L +Y++
Sbjct: 402 FVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 685 FXALYTGEGMDEMEFTEAESNMNDLVSEYQQ 593
F Y GEGM+E EFTEA ++ L +Y++
Sbjct: 402 FVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 685 FXALYTGEGMDEMEFTEAESNMNDLVSEYQQ 593
F Y GEGM+E EFTEA ++ L +Y++
Sbjct: 402 FVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 685 FXALYTGEGMDEMEFTEAESNMNDLVSEYQQ 593
F Y GEGM+E EFTEA ++ L +Y++
Sbjct: 402 FVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 685 FXALYTGEGMDEMEFTEAESNMNDLVSEYQQ 593
F Y GEGM+E EFTEA ++ L +Y++
Sbjct: 39 FVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 685 FXALYTGEGMDEMEFTEAESNMNDLVSEYQQ 593
F Y GEGM+E EF+EA +M L +Y++
Sbjct: 410 FVHWYVGEGMEEGEFSEAREDMAALEKDYEE 440
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 685 FXALYTGEGMDEMEFTEAESNMNDLVSEYQQ 593
F Y GEGM+E EF+EA +M L +Y++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 685 FXALYTGEGMDEMEFTEAESNMNDLVSEYQQ 593
F Y GEGM+E EF+EA +M L +Y++
Sbjct: 382 FVHWYVGEGMEEGEFSEAREDMAALEKDYEE 412
>AF022976-4|AAC69083.2| 345|Caenorhabditis elegans Serpentine
receptor, class h protein37 protein.
Length = 345
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 228 CFCCTYVNKKCLF*ISLYKFQI*LSTRPGGISRNVLNRLCSFK*FVITGSLVVLS---VK 398
CF C ++ +F I +Y FQ + + G+ +N + L +K +VI + S +
Sbjct: 59 CFTCEWLGN--VFLIDVYDFQPSILVKINGVLKNYIRPLNLYKVYVIVEGITETSGLILF 116
Query: 399 S*KACLILTLYRNHYGYSNKM 461
+ + LI+ LYR H K+
Sbjct: 117 TSRVLLIVDLYRPHPSIQRKI 137
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 685 FXALYTGEGMDEMEFTEAESNMNDLVSEYQQ 593
F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 399 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 685 FXALYTGEGMDEMEFTEAESNMNDLVSEYQQ 593
F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 685 FXALYTGEGMDEMEFTEAESNMNDLVSEYQQ 593
F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 409 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 439
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 685 FXALYTGEGMDEMEFTEAESNMNDLVSEYQQ 593
F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 403 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 685 FXALYTGEGMDEMEFTEAESNMNDLVSEYQQ 593
F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 685 FXALYTGEGMDEMEFTEAESNMNDLVSEYQQ 593
F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>Z93397-3|CAB07720.2| 376|Caenorhabditis elegans Hypothetical
protein ZC482.6 protein.
Length = 376
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -2
Query: 249 LHMCSRNKMADQNSIPTNADSTQTPVPFCFCCTECIKFGCCHERQTFNCDGFSNRSF 79
LHM +R + + TN T + FCC+E + +G F G+++R F
Sbjct: 253 LHMTARIRKNISSDKSTNTSKLLTLMACSFCCSETL-YGSFFFADRFMLYGYNDRRF 308
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 685 FXALYTGEGMDEMEFTEAESNMNDLVSEYQQ 593
F + GEGM+E EF EA ++ L +Y +
Sbjct: 407 FVHWFVGEGMEEGEFMEARDDLAALEKDYAE 437
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,987,416
Number of Sequences: 27780
Number of extensions: 271592
Number of successful extensions: 687
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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