Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_K24
         (1250 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    31   1.3  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    31   1.3  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    31   1.3  
AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    31   1.7  
Z81057-5|CAB02917.2|  846|Caenorhabditis elegans Hypothetical pr...    29   9.1  
AL132904-4|CAC35836.2|  582|Caenorhabditis elegans Hypothetical ...    29   9.1  

>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 18/52 (34%), Positives = 18/52 (34%)
 Frame = +1

Query: 517 GPPKKTXLFPXRXGXXSPXPPGGXNPXKXXXPXLXKKKFLKKXPXGXFPRPP 672
           GPP    L P   G   P PPGG  P     P       L     G  P PP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 18/52 (34%), Positives = 18/52 (34%)
 Frame = +1

Query: 517 GPPKKTXLFPXRXGXXSPXPPGGXNPXKXXXPXLXKKKFLKKXPXGXFPRPP 672
           GPP    L P   G   P PPGG  P     P       L     G  P PP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 18/52 (34%), Positives = 18/52 (34%)
 Frame = +1

Query: 517 GPPKKTXLFPXRXGXXSPXPPGGXNPXKXXXPXLXKKKFLKKXPXGXFPRPP 672
           GPP    L P   G   P PPGG  P     P       L     G  P PP
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346


>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
           protein D1007.7 protein.
          Length = 988

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +2

Query: 821 GXGAPPPPXFFXXGGGGXXF 880
           G G PPPP F   GGGG  F
Sbjct: 793 GHGGPPPPHFDRRGGGGPPF 812


>Z81057-5|CAB02917.2|  846|Caenorhabditis elegans Hypothetical protein
            F10D11.6 protein.
          Length = 846

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -3

Query: 1026 PPPXAXGGXFXSSPPPXXKKKRXXGGG 946
            PPP   GG     PPP   K    GGG
Sbjct: 408  PPPTIAGGPVAVQPPPDCSKCSAAGGG 434


>AL132904-4|CAC35836.2|  582|Caenorhabditis elegans Hypothetical
           protein Y111B2A.8 protein.
          Length = 582

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 882 KKXXPPPPXXKKXGGGGAP 826
           +K  PPPP  ++ GGGG P
Sbjct: 509 QKPPPPPPQSQQAGGGGPP 527


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,205,557
Number of Sequences: 27780
Number of extensions: 371913
Number of successful extensions: 1415
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3474674514
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)