Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_K21
(800 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 54 2e-07
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 54 2e-07
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 54 2e-07
03_01_0034 + 318432-318825,318902-319851 54 2e-07
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 54 2e-07
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 54 2e-07
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 54 2e-07
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 51 9e-07
08_02_1050 + 23949828-23949981,23950083-23950534,23951599-239516... 31 1.4
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 30 1.9
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 30 1.9
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 30 1.9
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 30 1.9
02_05_1127 + 34292894-34293284,34293948-34295443 30 1.9
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 30 2.5
02_05_1137 - 34372803-34372869,34373088-34373229,34373334-343734... 28 9.9
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1
Query: 728 EQFTAMFRRKAFLXXYTGEGMDEMXFT 648
EQFTAMFRRKAFL YTGEGMDEM FT
Sbjct: 383 EQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Score = 35.9 bits (79), Expect = 0.038
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -2
Query: 646 EAESNMNDLVSEYQQY 599
EAESNMNDLV+EYQQY
Sbjct: 410 EAESNMNDLVAEYQQY 425
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1
Query: 728 EQFTAMFRRKAFLXXYTGEGMDEMXFT 648
EQFTAMFRRKAFL YTGEGMDEM FT
Sbjct: 563 EQFTAMFRRKAFLHWYTGEGMDEMEFT 589
Score = 37.1 bits (82), Expect = 0.016
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -2
Query: 646 EAESNMNDLVSEYQQY 599
EAESNMNDLVSEYQQY
Sbjct: 590 EAESNMNDLVSEYQQY 605
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1
Query: 728 EQFTAMFRRKAFLXXYTGEGMDEMXFT 648
EQFTAMFRRKAFL YTGEGMDEM FT
Sbjct: 383 EQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Score = 35.9 bits (79), Expect = 0.038
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -2
Query: 646 EAESNMNDLVSEYQQY 599
EAESNMNDLV+EYQQY
Sbjct: 410 EAESNMNDLVAEYQQY 425
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1
Query: 728 EQFTAMFRRKAFLXXYTGEGMDEMXFT 648
EQFTAMFRRKAFL YTGEGMDEM FT
Sbjct: 383 EQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Score = 37.1 bits (82), Expect = 0.016
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -2
Query: 646 EAESNMNDLVSEYQQY 599
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1
Query: 728 EQFTAMFRRKAFLXXYTGEGMDEMXFT 648
EQFTAMFRRKAFL YTGEGMDEM FT
Sbjct: 383 EQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Score = 35.9 bits (79), Expect = 0.038
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -2
Query: 646 EAESNMNDLVSEYQQY 599
EAESNMNDLV+EYQQY
Sbjct: 410 EAESNMNDLVAEYQQY 425
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1
Query: 728 EQFTAMFRRKAFLXXYTGEGMDEMXFT 648
EQFTAMFRRKAFL YTGEGMDEM FT
Sbjct: 404 EQFTAMFRRKAFLHWYTGEGMDEMEFT 430
Score = 37.1 bits (82), Expect = 0.016
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -2
Query: 646 EAESNMNDLVSEYQQY 599
EAESNMNDLVSEYQQY
Sbjct: 431 EAESNMNDLVSEYQQY 446
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1
Query: 728 EQFTAMFRRKAFLXXYTGEGMDEMXFT 648
EQFTAMFRRKAFL YTGEGMDEM FT
Sbjct: 383 EQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Score = 37.1 bits (82), Expect = 0.016
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -2
Query: 646 EAESNMNDLVSEYQQY 599
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 51.2 bits (117), Expect = 9e-07
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = -1
Query: 728 EQFTAMFRRKAFLXXYTGEGMDEMXFT 648
EQFTAMFRRKAFL YT EGMDEM FT
Sbjct: 399 EQFTAMFRRKAFLHWYTSEGMDEMEFT 425
Score = 35.9 bits (79), Expect = 0.038
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -2
Query: 646 EAESNMNDLVSEYQQY 599
EAESNMNDLV+EYQQY
Sbjct: 426 EAESNMNDLVAEYQQY 441
>08_02_1050 +
23949828-23949981,23950083-23950534,23951599-23951631,
23952069-23952179,23953175-23953348
Length = 307
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 544 SPAPAPRQTLRPRRRWPP--GTVGTRRQGRSCCSQPRVNXISSMPS 675
SP+P+P + P RRWPP + R G S + P + + ++ S
Sbjct: 27 SPSPSPLLSRAPSRRWPPPLRASASGRGGASAAAAPTSSALDALLS 72
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 725 QFTAMFRRKAFLXXYTGEGMDEMXFTRG*E 636
+F M+ ++AF+ Y GEGM+E F+ E
Sbjct: 394 KFDLMYSKRAFVHWYVGEGMEEGEFSEARE 423
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 725 QFTAMFRRKAFLXXYTGEGMDEMXFTRG*E 636
+F M+ ++AF+ Y GEGM+E F+ E
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEARE 423
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 725 QFTAMFRRKAFLXXYTGEGMDEMXFTRG*E 636
+F M+ ++AF+ Y GEGM+E F+ E
Sbjct: 394 KFDLMYSKRAFVHWYVGEGMEEGEFSEARE 423
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 725 QFTAMFRRKAFLXXYTGEGMDEMXFTRG*E 636
+F M+ ++AF+ Y GEGM+E F+ E
Sbjct: 475 KFDLMYAKRAFVHWYVGEGMEEGEFSEARE 504
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 562 RQTLRPRRRWPPGTVGTRRQGRS 630
R T +P+RRWPPG+ G +G S
Sbjct: 83 RATGQPKRRWPPGSSGGGARGGS 105
>07_03_0860 +
22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +1
Query: 544 SPAPAPRQTLRPRRRWPPGTVGTRRQGRSCCSQPRVNXISSMPSP 678
SP+P+P RR PP G S PR S P P
Sbjct: 5 SPSPSPSSASNQRRSLPPSPAAASSVGSSPAFPPRKRRRSGRPPP 49
>02_05_1137 -
34372803-34372869,34373088-34373229,34373334-34373403,
34373521-34373823,34374215-34374280,34374425-34374490,
34374584-34374682,34376153-34376310,34376951-34377039,
34377209-34377591
Length = 480
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +1
Query: 550 APAPRQTLRPRRRWPPGTVGTRRQGRSCCS 639
+PA RQ L R+ PG G RRQGR C S
Sbjct: 19 SPAWRQELA--RQESPGVAGGRRQGRWCRS 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,644,084
Number of Sequences: 37544
Number of extensions: 327290
Number of successful extensions: 765
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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