Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_K19
         (791 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0209 - 19073147-19074041,19074117-19074163,19074258-190744...    29   5.6  
03_05_0377 + 23613181-23613342,23614469-23614501,23614606-236148...    28   9.8  

>05_04_0209 - 19073147-19074041,19074117-19074163,19074258-19074437,
            19074839-19074955,19075105-19075227,19075391-19075776,
            19076177-19076303,19077140-19077202,19078035-19078086,
            19078189-19080023
          Length = 1274

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 680  RIDCRADATEHSVHTSGMLAPPRLLKS 600
            ++ CR D  +HSV  S  LA PRL  S
Sbjct: 1018 QLQCRVDDPQHSVDDSLQLASPRLSSS 1044


>03_05_0377 +
           23613181-23613342,23614469-23614501,23614606-23614879,
           23615105-23615585,23616174-23616846
          Length = 540

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 288 YSEDGGKSFDTSRQHLQLYYKY 353
           Y E+ G   DTSRQ +Q Y  Y
Sbjct: 341 YKEENGDKVDTSRQQMQRYTHY 362


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,728,845
Number of Sequences: 37544
Number of extensions: 252343
Number of successful extensions: 420
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)