Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_K18
(930 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 90 2e-18
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 90 2e-18
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 90 2e-18
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 90 2e-18
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 88 1e-17
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 87 1e-17
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 87 1e-17
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 87 1e-17
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 87 1e-17
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 87 1e-17
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 87 1e-17
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 87 2e-17
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 86 3e-17
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 86 4e-17
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 86 4e-17
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 76 4e-14
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 71 2e-12
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 38 0.014
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 38 0.014
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 38 0.014
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 37 0.018
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 37 0.024
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 37 0.024
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical pr... 29 3.6
U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein. 29 3.6
U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine rec... 29 6.3
CU457740-11|CAM36341.1| 353|Caenorhabditis elegans Hypothetical... 29 6.3
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 8.3
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 89.8 bits (213), Expect = 2e-18
Identities = 53/89 (59%), Positives = 57/89 (64%)
Frame = -1
Query: 402 GINYQPPSXGXPEXTLAQGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVG 223
GINYQPP+ P LA+ CMLSNTTAI A+ L WYVG
Sbjct: 354 GINYQPPTV-VPGGDLAKVPRAV-CMLSNTTAI-AEAWARLDHKFDLMYAKRAFVHWYVG 410
Query: 222 EGMEEGEFSEAREDLAALEKDYEEVGMDS 136
EGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 411 EGMEEGEFSEAREDLAALEKDYEEVGVDS 439
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 89.8 bits (213), Expect = 2e-18
Identities = 53/89 (59%), Positives = 57/89 (64%)
Frame = -1
Query: 402 GINYQPPSXGXPEXTLAQGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVG 223
GINYQPP+ P LA+ CMLSNTTAI A+ L WYVG
Sbjct: 353 GINYQPPTV-VPGGDLAKVPRAV-CMLSNTTAI-AEAWARLDHKFDLMYAKRAFVHWYVG 409
Query: 222 EGMEEGEFSEAREDLAALEKDYEEVGMDS 136
EGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 410 EGMEEGEFSEAREDLAALEKDYEEVGVDS 438
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 89.8 bits (213), Expect = 2e-18
Identities = 53/89 (59%), Positives = 57/89 (64%)
Frame = -1
Query: 402 GINYQPPSXGXPEXTLAQGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVG 223
GINYQPP+ P LA+ CMLSNTTAI A+ L WYVG
Sbjct: 354 GINYQPPTV-VPGGDLAKVPRAV-CMLSNTTAI-AEAWARLDHKFDLMYAKRAFVHWYVG 410
Query: 222 EGMEEGEFSEAREDLAALEKDYEEVGMDS 136
EGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 411 EGMEEGEFSEAREDLAALEKDYEEVGVDS 439
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 89.8 bits (213), Expect = 2e-18
Identities = 53/89 (59%), Positives = 57/89 (64%)
Frame = -1
Query: 402 GINYQPPSXGXPEXTLAQGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVG 223
GINYQPP+ P LA+ CMLSNTTAI A+ L WYVG
Sbjct: 354 GINYQPPTV-VPGGDLAKVPRAV-CMLSNTTAI-AEAWARLDHKFDLMYAKRAFVHWYVG 410
Query: 222 EGMEEGEFSEAREDLAALEKDYEEVGMDS 136
EGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 411 EGMEEGEFSEAREDLAALEKDYEEVGVDS 439
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 87.8 bits (208), Expect = 1e-17
Identities = 51/89 (57%), Positives = 57/89 (64%)
Frame = -1
Query: 402 GINYQPPSXGXPEXTLAQGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVG 223
GINYQPP+ P L++ CMLSNTTAI A+ L WYVG
Sbjct: 359 GINYQPPTV-VPGADLSKLQRAV-CMLSNTTAI-AEAWARLDHKFDLMYAKRAFVHWYVG 415
Query: 222 EGMEEGEFSEAREDLAALEKDYEEVGMDS 136
EGMEEGEFSEAREDLAALEKDYEEVG+D+
Sbjct: 416 EGMEEGEFSEAREDLAALEKDYEEVGLDA 444
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 87.4 bits (207), Expect = 1e-17
Identities = 52/89 (58%), Positives = 56/89 (62%)
Frame = -1
Query: 402 GINYQPPSXGXPEXTLAQGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVG 223
GINYQPP+ P LA+ CMLSNTTAI A+ L WYVG
Sbjct: 352 GINYQPPTV-VPGGDLAKVPRAV-CMLSNTTAI-AEAWSRLDYKFDLMYAKRAFVHWYVG 408
Query: 222 EGMEEGEFSEAREDLAALEKDYEEVGMDS 136
EGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 409 EGMEEGEFTEAREDLAALEKDYEEVGADS 437
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 87.4 bits (207), Expect = 1e-17
Identities = 52/89 (58%), Positives = 56/89 (62%)
Frame = -1
Query: 402 GINYQPPSXGXPEXTLAQGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVG 223
GINYQPP+ P LA+ CMLSNTTAI A+ L WYVG
Sbjct: 352 GINYQPPTV-VPGGDLAKVPRAV-CMLSNTTAI-AEAWSRLDYKFDLMYAKRAFVHWYVG 408
Query: 222 EGMEEGEFSEAREDLAALEKDYEEVGMDS 136
EGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 409 EGMEEGEFTEAREDLAALEKDYEEVGADS 437
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 87.4 bits (207), Expect = 1e-17
Identities = 52/89 (58%), Positives = 56/89 (62%)
Frame = -1
Query: 402 GINYQPPSXGXPEXTLAQGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVG 223
GINYQPP+ P LA+ CMLSNTTAI A+ L WYVG
Sbjct: 352 GINYQPPTV-VPGGDLAKVPRAV-CMLSNTTAI-AEAWSRLDYKFDLMYAKRAFVHWYVG 408
Query: 222 EGMEEGEFSEAREDLAALEKDYEEVGMDS 136
EGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 409 EGMEEGEFTEAREDLAALEKDYEEVGADS 437
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 87.4 bits (207), Expect = 1e-17
Identities = 52/89 (58%), Positives = 56/89 (62%)
Frame = -1
Query: 402 GINYQPPSXGXPEXTLAQGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVG 223
GINYQPP+ P LA+ CMLSNTTAI A+ L WYVG
Sbjct: 352 GINYQPPTV-VPGGDLAKVPRAV-CMLSNTTAI-AEAWSRLDYKFDLMYAKRAFVHWYVG 408
Query: 222 EGMEEGEFSEAREDLAALEKDYEEVGMDS 136
EGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 409 EGMEEGEFTEAREDLAALEKDYEEVGADS 437
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 87.4 bits (207), Expect = 1e-17
Identities = 52/89 (58%), Positives = 56/89 (62%)
Frame = -1
Query: 402 GINYQPPSXGXPEXTLAQGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVG 223
GINYQPP+ P LA+ CMLSNTTAI A+ L WYVG
Sbjct: 352 GINYQPPTV-VPGGDLAKVPRAV-CMLSNTTAI-AEAWSRLDYKFDLMYAKRAFVHWYVG 408
Query: 222 EGMEEGEFSEAREDLAALEKDYEEVGMDS 136
EGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 409 EGMEEGEFTEAREDLAALEKDYEEVGADS 437
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 87.4 bits (207), Expect = 1e-17
Identities = 52/89 (58%), Positives = 56/89 (62%)
Frame = -1
Query: 402 GINYQPPSXGXPEXTLAQGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVG 223
GINYQPP+ P LA+ CMLSNTTAI A+ L WYVG
Sbjct: 352 GINYQPPTV-VPGGDLAKVPRAV-CMLSNTTAI-AEAWSRLDYKFDLMYAKRAFVHWYVG 408
Query: 222 EGMEEGEFSEAREDLAALEKDYEEVGMDS 136
EGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 409 EGMEEGEFTEAREDLAALEKDYEEVGADS 437
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 87.0 bits (206), Expect = 2e-17
Identities = 51/89 (57%), Positives = 56/89 (62%)
Frame = -1
Query: 402 GINYQPPSXGXPEXTLAQGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVG 223
G+NYQPP+ P +A+ CMLSNTTAI A+ L WYVG
Sbjct: 349 GLNYQPPTV-IPGGDMAKVPRAV-CMLSNTTAI-AEAWQRLDYKFDLMYAKRAFVHWYVG 405
Query: 222 EGMEEGEFSEAREDLAALEKDYEEVGMDS 136
EGMEEGEFSEAREDLAALEKDYEEVG DS
Sbjct: 406 EGMEEGEFSEAREDLAALEKDYEEVGADS 434
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 86.2 bits (204), Expect = 3e-17
Identities = 50/89 (56%), Positives = 56/89 (62%)
Frame = -1
Query: 402 GINYQPPSXGXPEXTLAQGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVG 223
GINYQPP+ P +A+ CMLSNTTAI + L WYVG
Sbjct: 354 GINYQPPTV-VPGGDMAKLQRAV-CMLSNTTAI-QEAWARLDHKFDLMYAKRAFVHWYVG 410
Query: 222 EGMEEGEFSEAREDLAALEKDYEEVGMDS 136
EGMEEGEFSEARED+AALEKDYEEVG+DS
Sbjct: 411 EGMEEGEFSEAREDMAALEKDYEEVGVDS 439
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 85.8 bits (203), Expect = 4e-17
Identities = 49/88 (55%), Positives = 55/88 (62%)
Frame = -1
Query: 402 GINYQPPSXGXPEXTLAQGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVG 223
GINYQPP+ P L + T CM+SNTTAI A+ L WYVG
Sbjct: 360 GINYQPPTV-VPGGDLGK-QTRSVCMISNTTAI-AEAWARLDHKFDLMYAKRAFVHWYVG 416
Query: 222 EGMEEGEFSEAREDLAALEKDYEEVGMD 139
EGMEEGEFSEARED+AALEKDYEE+G D
Sbjct: 417 EGMEEGEFSEAREDMAALEKDYEEIGED 444
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 85.8 bits (203), Expect = 4e-17
Identities = 49/88 (55%), Positives = 55/88 (62%)
Frame = -1
Query: 402 GINYQPPSXGXPEXTLAQGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVG 223
GINYQPP+ P L + T CM+SNTTAI A+ L WYVG
Sbjct: 332 GINYQPPTV-VPGGDLGK-QTRSVCMISNTTAI-AEAWARLDHKFDLMYAKRAFVHWYVG 388
Query: 222 EGMEEGEFSEAREDLAALEKDYEEVGMD 139
EGMEEGEFSEARED+AALEKDYEE+G D
Sbjct: 389 EGMEEGEFSEAREDMAALEKDYEEIGED 416
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 75.8 bits (178), Expect = 4e-14
Identities = 41/65 (63%), Positives = 44/65 (67%)
Frame = -1
Query: 330 CMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVGEGMEEGEFSEAREDLAALEKDYEE 151
CMLS+TTAI A+ L WYVGEGMEEGEF+EAREDLAALEKDYEE
Sbjct: 11 CMLSDTTAI-AEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
Query: 150 VGMDS 136
VG DS
Sbjct: 70 VGADS 74
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 70.5 bits (165), Expect = 2e-12
Identities = 45/89 (50%), Positives = 50/89 (56%)
Frame = -1
Query: 402 GINYQPPSXGXPEXTLAQGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVG 223
GINYQ P LA+ CMLSNTTAI A+ L W+VG
Sbjct: 357 GINYQAPIT-VEGGDLAKVHRAV-CMLSNTTAI-AEAWARLDHKFDLMYSKRAFVHWFVG 413
Query: 222 EGMEEGEFSEAREDLAALEKDYEEVGMDS 136
EGMEEGEF EAR+DLAALEKDY EV D+
Sbjct: 414 EGMEEGEFMEARDDLAALEKDYAEVSRDT 442
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 37.5 bits (83), Expect = 0.014
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = -1
Query: 351 QGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVGEGMEEGEFSEAREDLAA 172
+G + + N+TAI +L ++ T+ WY GEGM+E EF+EA ++
Sbjct: 359 RGLKMSATFIGNSTAI-QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 171 LEKDYEE 151
L +Y++
Sbjct: 418 LVSEYQQ 424
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 37.5 bits (83), Expect = 0.014
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = -1
Query: 351 QGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVGEGMEEGEFSEAREDLAA 172
+G + + N+TAI +L ++ T+ WY GEGM+E EF+EA ++
Sbjct: 359 RGLKMSATFIGNSTAI-QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 171 LEKDYEE 151
L +Y++
Sbjct: 418 LVSEYQQ 424
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 37.5 bits (83), Expect = 0.014
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = -1
Query: 351 QGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVGEGMEEGEFSEAREDLAA 172
+G + + N+TAI +L ++ T+ WY GEGM+E EF+EA ++
Sbjct: 359 RGLKMSATFIGNSTAI-QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 171 LEKDYEE 151
L +Y++
Sbjct: 418 LVSEYQQ 424
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 37.1 bits (82), Expect = 0.018
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = -1
Query: 351 QGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVGEGMEEGEFSEAREDLAA 172
+G + + N+TAI +L ++ T+ WY GEGM+E EF+EA ++
Sbjct: 359 RGVKMAATFVGNSTAI-QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 171 LEKDYEE 151
L +Y++
Sbjct: 418 LVSEYQQ 424
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 36.7 bits (81), Expect = 0.024
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = -1
Query: 351 QGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVGEGMEEGEFSEAREDLAA 172
+G + + N+TAI +L ++ T+ WY GEGM+E EF+EA ++
Sbjct: 359 RGLKMAATFVGNSTAI-QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 171 LEKDYEE 151
L +Y++
Sbjct: 418 LISEYQQ 424
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 36.7 bits (81), Expect = 0.024
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = -1
Query: 351 QGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPSVLSCXWYVGEGMEEGEFSEAREDLAA 172
+G + + N+TAI +L ++ T+ WY GEGM+E EF+EA ++
Sbjct: 359 RGLKMAATFVGNSTAI-QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 171 LEKDYEE 151
L +Y++
Sbjct: 418 LISEYQQ 424
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -1
Query: 405 SGINYQPPSXGXPEXTLAQGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPS 250
SG++ S G P+ + +QGS+ S ++S+T + A +T + S T S
Sbjct: 1725 SGVSTSSASSGQPQMSTSQGSSAGSTVVSSTASPAASSTAPSSTGTMSSTSS 1776
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -1
Query: 405 SGINYQPPSXGXPEXTLAQGSTCPSCMLSNTTAIVAKLGLALTTSSTSCTPS 250
SG++ S P+ + +QGS+ S + S+TT +V+ + +T + T S
Sbjct: 1642 SGVSTSSASSTQPQMSTSQGSSAGSTVASSTTGLVSTSTVPSSTGTMGSTSS 1693
>Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical
protein C25G4.5 protein.
Length = 1263
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 239 HESTLGVHEVELVVKASPSFATMAVVLDNMQ 331
++S L +H +E ++KA S MAVVL+ Q
Sbjct: 75 YKSPLEIHTIEDMIKAKASIQEMAVVLEGAQ 105
>U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.
Length = 1263
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 239 HESTLGVHEVELVVKASPSFATMAVVLDNMQ 331
++S L +H +E ++KA S MAVVL+ Q
Sbjct: 75 YKSPLEIHTIEDMIKAKASIQEMAVVLEGAQ 105
>U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine
receptor, class x protein56 protein.
Length = 298
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 88 YFIGLVLFGSLTLAFSGVHADFFVILLEGSQVLTGF 195
YF +VLF T+ H FF++ L +LT F
Sbjct: 60 YFCPMVLFDQSTMKQYSHHCGFFILFLSEFSILTHF 95
>CU457740-11|CAM36341.1| 353|Caenorhabditis elegans Hypothetical
protein C50E10.11 protein.
Length = 353
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 49 TWNVKRCECASKRYFIGLVLFGSLTLAFSGVHADFFVIL 165
TW ++ E ++ Y L++FG L FS V+ FF ++
Sbjct: 154 TWLIENYENTARVYLRVLLIFGQQILIFSLVYVTFFNLI 192
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 102 STLRLPHPRLQRSPCRLLRNP--SRGQPGPHGLR-RTLPPPYPHRR 230
S R P P+ + P R R+P S+ P P + R+ PP P RR
Sbjct: 395 SKSRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSKSPPAPRRR 440
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,154,416
Number of Sequences: 27780
Number of extensions: 204869
Number of successful extensions: 729
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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