Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_K18
         (930 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   5.2  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    22   6.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   6.9  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 111 RLPHPRLQRSP 143
           R PHPRL+R P
Sbjct: 110 RPPHPRLRREP 120



 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 111 RLPHPRLQRSP 143
           R PHPRL+R P
Sbjct: 136 RPPHPRLRREP 146


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 291 GLALTTSSTSCTPSVLSCXWYVGEGMEEGE 202
           G  L   S+S   +  SC WY  +G EE +
Sbjct: 177 GNRLIEESSSVMEAAYSCHWY--DGSEEAK 204


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 325 HAGRARXTLCQG 360
           HAG A  TLC G
Sbjct: 31  HAGNAEKTLCSG 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,550
Number of Sequences: 438
Number of extensions: 2837
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30355689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)