Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_K17
(769 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 297 1e-81
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 293 1e-80
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 118 9e-28
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 63 4e-11
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.24
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.55
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.73
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.3
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 28 1.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.3
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.2
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 6.8
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 9.0
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 297 bits (729), Expect = 1e-81
Identities = 139/200 (69%), Positives = 159/200 (79%), Gaps = 2/200 (1%)
Frame = -3
Query: 725 LRFDGALNVTSPSSRLTWCLTPVSTSHWSRTRQSSLPE--KAYHEQLSVAEITNACFEPA 552
LRF G+LNV + L P H+ S + KA+HE SV EITN CFEP
Sbjct: 246 LRFAGSLNVDLNEFQTN--LVPYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPY 303
Query: 551 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 372
NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI Y+P
Sbjct: 304 NQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEP 363
Query: 371 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 192
P VPG +AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFS
Sbjct: 364 PQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFS 423
Query: 191 EAREDLAALEKDYEEVGMDS 132
EAREDLAALE+DYEEVG DS
Sbjct: 424 EAREDLAALERDYEEVGQDS 443
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 293 bits (720), Expect = 1e-80
Identities = 137/200 (68%), Positives = 158/200 (79%), Gaps = 2/200 (1%)
Frame = -3
Query: 725 LRFDGALNVTSPSSRLTWCLTPVSTSHWSRTRQSSLPE--KAYHEQLSVAEITNACFEPA 552
LRF+G+LNV + L P H+ + + KA+HE SV EITN CFEP
Sbjct: 242 LRFEGSLNVDLAEFQTN--LVPYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPY 299
Query: 551 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 372
NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI +P
Sbjct: 300 NQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRP 359
Query: 371 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 192
P + G ++AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFS
Sbjct: 360 PQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFS 419
Query: 191 EAREDLAALEKDYEEVGMDS 132
EAREDLAALE+DYEEVG DS
Sbjct: 420 EAREDLAALERDYEEVGQDS 439
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 118 bits (284), Expect = 9e-28
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 5/201 (2%)
Frame = -3
Query: 722 RFDGALNVTSPSSRLTWCLTPVSTSHWSRTRQSSLPE--KAYHEQLSVAEITNACFEPAN 549
RF G LN S +L + P H+ + L + + +SV E+T F+ N
Sbjct: 241 RFPGELN--SDLRKLAVNMVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANN 298
Query: 548 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 369
MV DPRHG+Y+ L+RG V K+V+ I +++TK + FV+W P + PP
Sbjct: 299 MMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPP 358
Query: 368 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 189
DL + + + N+T+I E + RL +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 359 K-----DL---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 188 AR---EDLAALEKDYEEVGMD 135
A DL + + Y+E G+D
Sbjct: 411 AESNMNDLVSEYQQYQEAGID 431
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 63.3 bits (147), Expect = 4e-11
Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 4/172 (2%)
Frame = -3
Query: 653 TSHWSRTRQSSLPEKAYHEQLSVAEITNACFEPANQMVKCDP-RHGKYMACCMLYRGDVV 477
TS+ T Q KA + +V ++ P NQMV +P + +++ + +G+
Sbjct: 271 TSYTPFTNQQVEEAKAIRKT-TVLDVMRRLLLPKNQMVSVNPSKKSCFISILDIIQGEAD 329
Query: 476 PKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAI 297
P DV+ ++ I+ +R F+ W P +V ++ + P + ++ + ML+N T+I
Sbjct: 330 PADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGL-----MLANHTSI 384
Query: 296 AEAWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAALEKDYE 150
A + R ++D + + AF+ Y E + E EF +R+ +A L +YE
Sbjct: 385 ASLFKRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEFDSSRDVVADLINEYE 436
Score = 28.7 bits (61), Expect = 0.97
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 699 DLTEFQTNLVPYPRIHFPLVTYAP 628
DL +L+P PR HF L +Y P
Sbjct: 252 DLVSIIASLIPSPRCHFLLTSYTP 275
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.24
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 490 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 356
VV P + RP++P P LS V PV+ V + PP P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.55
Identities = 30/106 (28%), Positives = 39/106 (36%), Gaps = 1/106 (0%)
Frame = -1
Query: 664 PPYPLPTGHVRASHLCPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVV 485
PP P P+ V A+ L + P P S+ + PP ++ +
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPP-PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAA 348
Query: 484 TSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVS-TTSHPPWCPEA 350
S P S P P S STG QP S S S+PP P A
Sbjct: 349 GSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPA 394
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.1 bits (62), Expect = 0.73
Identities = 25/94 (26%), Positives = 41/94 (43%)
Frame = -1
Query: 649 PTGHVRASHLCPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPR 470
PTG+ + + P P +S +P + T+ ++ + +TPV ++ CT TS P
Sbjct: 401 PTGN-STTPVTPTVPPTSS-STPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPY 458
Query: 469 M*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHP 368
T + S P +N +T S TS P
Sbjct: 459 --TSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTP 490
Score = 26.6 bits (56), Expect = 3.9
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = -1
Query: 586 SPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGV 407
+P + T+ ++ + +TPV ++ CT TS P T P S ++ S++
Sbjct: 525 TPVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPYTST-PVTSSNYTISSSTPVTS 583
Query: 406 QPVSRSVSTTS 374
PV+ + TTS
Sbjct: 584 TPVTTTNCTTS 594
Score = 25.8 bits (54), Expect = 6.8
Identities = 24/94 (25%), Positives = 38/94 (40%)
Frame = -1
Query: 655 PLPTGHVRASHLCPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSY 476
PL T + S P T + +P + T+ ++ + +TPV ++ CT TS
Sbjct: 421 PLTTTNCTTSTSVPYTSTPVT-STPLATTNCTTSTSVPYTSTPVTSTPLTTTNCTTSTSI 479
Query: 475 PRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 374
P T + S P +N +T S TS
Sbjct: 480 PY--TSTPVTSTPLTTTNCTTSTSVPYTSTPVTS 511
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -3
Query: 578 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 453
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 450 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGK 593
S G +LGY ++ A++V+A + V HL+ G D + K
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK 454
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.3
Identities = 24/73 (32%), Positives = 31/73 (42%)
Frame = -1
Query: 688 VPD*LGALPPYPLPTGHVRASHLCPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTW 509
VP LPP P+PT P P +S +P T SS P+ NA+P S+
Sbjct: 1219 VPTPSAGLPPVPVPTAK------APPVPAPSS-EAPSVSTPRSSVPSPHSNASPSPTSSS 1271
Query: 508 LAVCCTVVTSYPR 470
+A TS R
Sbjct: 1272 MASAAPARTSVSR 1284
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -1
Query: 454 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 368
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 473 WVRRHHGTAYSKPCTCHDGG 532
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 9.0
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -1
Query: 457 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 362
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,021,120
Number of Sequences: 5004
Number of extensions: 64399
Number of successful extensions: 249
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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