Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_K13
         (792 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0460 - 17955102-17955146,17955253-17955310,17955442-179555...    31   1.4  
09_04_0424 + 17444261-17444665,17445974-17446367,17447367-174474...    29   4.2  
09_04_0506 - 18188785-18190599                                         29   5.6  
07_03_0982 + 23116343-23117089,23117227-23117313,23117424-231175...    29   5.6  
10_03_0028 + 7184825-7184837,7185449-7185771,7186052-7186069           28   7.4  
10_03_0012 - 7037088-7037282,7037453-7037954,7038079-7038081,704...    28   7.4  
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066     28   9.8  

>11_04_0460 -
           17955102-17955146,17955253-17955310,17955442-17955593,
           17955888-17955993,17956101-17956222,17956766-17956834,
           17956969-17957214,17957331-17957373,17957449-17957520,
           17957954-17958066,17958158-17958238,17958343-17958415,
           17959413-17959519,17960410-17960514,17960684-17960974,
           17961621-17961707,17961774-17961842,17961917-17961973,
           17962057-17962155,17962223-17962312,17962395-17962511,
           17964164-17964244,17964353-17964502,17964812-17964956,
           17967359-17967510,17967647-17967784,17967838-17967914,
           17968032-17968134
          Length = 1015

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
 Frame = -2

Query: 275 LRSVLSYV-----CSYSTTPASSIRASEPPASKSS 186
           LRSV  YV      +YS+TP+S++R + PPA+  S
Sbjct: 464 LRSVFPYVHGRLPAAYSSTPSSTLRPAPPPAAPPS 498


>09_04_0424 +
           17444261-17444665,17445974-17446367,17447367-17447425,
           17447507-17447637,17447737-17447833,17447936-17448100
          Length = 416

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 280 PNFAPYYPTYAAIQPPPLPQ 221
           P FAP++  + A+ PPP PQ
Sbjct: 61  PQFAPHFVPFHAVGPPPPPQ 80


>09_04_0506 - 18188785-18190599
          Length = 604

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 517 QQNPTAAFLPTVAAAQSQPIFNRPNPI 437
           Q+ P    +P VAA    P+ +RPNP+
Sbjct: 102 QRQPEKVHIPGVAAVPPAPVPDRPNPV 128


>07_03_0982 +
           23116343-23117089,23117227-23117313,23117424-23117555,
           23118135-23118269,23118644-23118709,23118797-23118907,
           23119237-23119329,23119555-23119659,23119752-23119829
          Length = 517

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = -3

Query: 346 APVYSVRTIQDRGDSNHTMIRTPNFAPYYPTYAAIQPPPLP 224
           AP YSV    D+  S  +    P +A Y P Y    P P P
Sbjct: 49  APPYSVGGYSDQPPSAPSYAPPPQYAGYAPPYNNPNPAPYP 89


>10_03_0028 + 7184825-7184837,7185449-7185771,7186052-7186069
          Length = 117

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = -2

Query: 629 TXHXPASRPHLTDLSKHTHITKSTCF*SQSAATREHRTAKPYRCFPANRSSSS 471
           T H P SR H T   ++  + K       SA    HR A  YR  P++  SSS
Sbjct: 35  TFHLP-SRLHATPSLENACVVKVLQLPPDSACGLRHRPAASYRIRPSSSLSSS 86


>10_03_0012 -
           7037088-7037282,7037453-7037954,7038079-7038081,
           7040633-7041213
          Length = 426

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -3

Query: 280 PNFAPYYPTYAAIQPPPLP 224
           PN   YYP Y    PPP P
Sbjct: 60  PNLPQYYPQYGNFYPPPPP 78


>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
          Length = 646

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 274 FAPYYPTYAAIQPPPLP 224
           +A YYP+   +QPPP P
Sbjct: 536 YASYYPSVTPVQPPPPP 552


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,037,436
Number of Sequences: 37544
Number of extensions: 310685
Number of successful extensions: 808
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)