Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_K12
(783 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 157 1e-39
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 155 7e-39
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 123 3e-29
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 57 2e-09
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 56 6e-09
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 36 0.009
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.081
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.14
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 30 0.33
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 30 0.33
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.33
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 0.75
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.75
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 29 0.99
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 0.99
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 28 1.3
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 28 1.3
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 28 1.3
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 28 1.3
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 28 1.7
SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit Ssr4|Schizos... 28 1.7
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 2.3
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 3.0
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 4.0
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 4.0
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 4.0
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.3
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.3
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 5.3
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 5.3
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 5.3
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 7.0
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 26 7.0
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 7.0
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 9.3
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 25 9.3
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 9.3
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 25 9.3
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 157 bits (382), Expect = 1e-39
Identities = 81/163 (49%), Positives = 104/163 (63%)
Frame = -2
Query: 716 KDNNLLGKFELXRDPTRRRVACLKLRXXXXXXXXXXXXXPLSRSPPXKENKITITNDKGR 537
KD NLLGKFEL P R ++ K KITITNDKGR
Sbjct: 449 KDCNLLGKFELSGIPPAPR-GVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGR 507
Query: 536 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 357
LSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K+ SDK+
Sbjct: 508 LSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEA 567
Query: 356 ILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 228
I +TI+WLD N A K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 568 IDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
Score = 72.1 bits (169), Expect = 8e-14
Identities = 38/61 (62%), Positives = 44/61 (72%)
Frame = -1
Query: 747 QVFEGERAMTQR*QLAR*IRAXPGSHPAPRGVPQIEVTFDIDANGILNVSAIEKSTXQGE 568
QVFEGERA T+ L G PAPRGVPQIEVTFD+DANGILNVSA+EK T + +
Sbjct: 439 QVFEGERARTKDCNLLGKFE-LSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQ 497
Query: 567 Q 565
+
Sbjct: 498 K 498
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 155 bits (376), Expect = 7e-39
Identities = 80/163 (49%), Positives = 104/163 (63%)
Frame = -2
Query: 716 KDNNLLGKFELXRDPTRRRVACLKLRXXXXXXXXXXXXXPLSRSPPXKENKITITNDKGR 537
KD NLLGKFEL P R ++ K KITITNDKGR
Sbjct: 449 KDCNLLGKFELSGIPPAPR-GVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGR 507
Query: 536 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 357
LSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K+ SDK+T
Sbjct: 508 LSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKET 567
Query: 356 ILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 228
+ +TI+WLDSN A K+E+E KQKELE + NPI+ K+YQ
Sbjct: 568 VDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
Score = 72.1 bits (169), Expect = 8e-14
Identities = 38/61 (62%), Positives = 44/61 (72%)
Frame = -1
Query: 747 QVFEGERAMTQR*QLAR*IRAXPGSHPAPRGVPQIEVTFDIDANGILNVSAIEKSTXQGE 568
QVFEGERA T+ L G PAPRGVPQIEVTFD+DANGILNVSA+EK T + +
Sbjct: 439 QVFEGERARTKDCNLLGKFE-LSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQ 497
Query: 567 Q 565
+
Sbjct: 498 K 498
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 123 bits (297), Expect = 3e-29
Identities = 67/165 (40%), Positives = 99/165 (60%), Gaps = 3/165 (1%)
Frame = -2
Query: 716 KDNNLLGKFELXR-DPTRRRVACLKLRXXXXXXXXXXXXXPLSRSPPXKENKITITNDKG 540
KDNNLLGKF+L P R V +++ + +S K K+ I NDKG
Sbjct: 478 KDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSA-VDKSGKGKPEKLVIKNDKG 536
Query: 539 RLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKLKEKISDSDK 363
RLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K +DE+L K+ DK
Sbjct: 537 RLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDK 596
Query: 362 QTILDKCNDTIKWLD-SNQLADKEEYEHKQKELEGIYNPIITKMY 231
Q +LD D +WL+ + A KEE+E ++++L+ + +PI K+Y
Sbjct: 597 QAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
Score = 63.7 bits (148), Expect = 3e-11
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = -1
Query: 747 QVFEGERAMTQR*QLAR*IRAXPGSHPAPRGVPQIEVTFDIDANGILNVSAIEKS 583
QV+EGER +T+ L G PAPRGVPQIEVTF++DANG+L VSA++KS
Sbjct: 468 QVYEGERTLTKDNNLLGKFDLR-GIPPAPRGVPQIEVTFEVDANGVLTVSAVDKS 521
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 57.2 bits (132), Expect = 2e-09
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Frame = -2
Query: 773 DNQPRSTHPKYLRVSVL*PKDNNLLGKFELXRDPTRRRVACLKLRXXXXXXXXXXXXXPL 594
DNQ T P Y V +N LG+F+L P R +L
Sbjct: 436 DNQTTVTFPVYQGERVN-CAENEPLGEFQLTGIPPMPRGQA-ELEATFELDANGILKVTA 493
Query: 593 SRSPPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMK 414
+ I ITN G LS +I+ M+ A+K++ +D + ++AK+ LESY +++
Sbjct: 494 VEKTTGRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIE 553
Query: 413 STMEDEKLKEKISDSDKQTI---LDKCNDTIKWLDSN 312
+T+ + + K+ DK I L +C ++ D+N
Sbjct: 554 TTISEPNVMMKLKRGDKSKIEAQLAECMSQLELEDTN 590
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 56.0 bits (129), Expect = 6e-09
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = -1
Query: 747 QVFEGERAMTQR*QLAR*IRAXPGSHPAPRGVPQIEVTFDIDANGILNVSAIEKST 580
+VF+GER + + +L + G PAP+G PQIEV+FD+DA+GI+NVSA +K+T
Sbjct: 482 RVFQGERELVRDNKLIGNFQLT-GIAPAPKGQPQIEVSFDVDADGIINVSARDKAT 536
Score = 52.8 bits (121), Expect = 5e-08
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Frame = -2
Query: 575 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME-- 402
K++ IT+ G L+ EIE MV +AEKYR D +KE I+ N ES C ++S ++
Sbjct: 538 KDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIH 596
Query: 401 DEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 228
+KL ++ + + I D K ++ E+ + K E++ + + +Y+
Sbjct: 597 KDKLDQQAVEDLRSKITDLRETVAKVNAGDEGITSEDMKKKIDEIQQLSLKVFESVYK 654
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 35.5 bits (78), Expect = 0.009
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = -2
Query: 563 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKSTMED--EK 393
++++ + RL E +E+ EAE DK ET+ KNALE Y + ++ ++D
Sbjct: 542 LSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAP 600
Query: 392 LKEKISDSDKQTILDKCNDTIKWL-DSNQLADKEEYEHKQKELEGIYNPI 246
+ S + +L K D WL + + K Y K ++L + PI
Sbjct: 601 FTNEEESSKFKEMLTKAED---WLYEEGEDTTKAVYTAKLEDLMRVGGPI 647
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.081
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = -2
Query: 527 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 348
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 347 K 345
K
Sbjct: 79 K 79
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.14
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = -2
Query: 545 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 366
+GR + + N+ E + DDKQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 365 KQTILDKCNDTIK 327
+ LDK D K
Sbjct: 1318 EMEDLDKMEDLEK 1330
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 30.3 bits (65), Expect = 0.33
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Frame = -2
Query: 590 RSPPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 411
+S K N D+ + +EE E ++EK ++ K + KNA ++ M
Sbjct: 80 KSKKAKANAFEAFADEQSVEEEEEE----DSEKPVRKNKKSSKKASPKNAFDALADDMDD 135
Query: 410 TMEDEKLKEKISDSDKQTILDKC-NDTIKWLDSNQLADKEEYEHKQKE 270
DE+ E S K+ K +D + LD + E+ + K+K+
Sbjct: 136 LSLDEEESESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKK 183
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 30.3 bits (65), Expect = 0.33
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = -2
Query: 545 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKL-KEKISDS 369
K R +E I + EAE+ + E ++Q+ Q K E + K E EKL KE+I
Sbjct: 82 KQRAQEERIRQ--KEAERLKREKERQQRE-QEKKLREQEKIAAKKMKELEKLEKERIRLQ 138
Query: 368 DKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 270
++Q ++ + ++ + Q +E+ +K+++
Sbjct: 139 EQQRRKEERDQKLREKEEAQRLRQEQILNKERQ 171
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 0.33
Identities = 23/90 (25%), Positives = 43/90 (47%)
Frame = -2
Query: 533 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI 354
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFDV--- 1661
Query: 353 LDKCNDTIKWLDSNQLADKEEYEHKQKELE 264
K + + A YE K ++L+
Sbjct: 1662 --KLKKVVAETEFRSKAKISVYEKKTRDLQ 1689
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 29.1 bits (62), Expect = 0.75
Identities = 22/95 (23%), Positives = 42/95 (44%)
Frame = -2
Query: 557 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 378
+ +K SKE ++ EAE+ E +E + + + S K +++ LK K
Sbjct: 433 LEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRRLDE--LKAKA 490
Query: 377 SDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK 273
D++++ D +K+ L + EY +QK
Sbjct: 491 EDAERRNDFTLAAD-LKYYGIPDLQKRIEYLEQQK 524
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.75
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 545 KGRLSKEEIERMVNEAEKYRNEDD 474
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 28.7 bits (61), Expect = 0.99
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = -2
Query: 575 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 396
K+ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 530 KKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KNR 580
Query: 395 KLKEKISD 372
KLK+K S+
Sbjct: 581 KLKKKASN 588
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 0.99
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 389 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 264
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 28.3 bits (60), Expect = 1.3
Identities = 27/109 (24%), Positives = 45/109 (41%)
Frame = -2
Query: 590 RSPPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 411
+ P K T+ + + E+ + E EK + +A+ A +
Sbjct: 209 QKPKLKAEGSTLKGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSA 268
Query: 410 TMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELE 264
+E EK KEK D D++ DT+ D NQ+ +E E QKE++
Sbjct: 269 KLEKEKAKEKQKDKDQE------QDTVS--DKNQI---DEIEKGQKEVD 306
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 28.3 bits (60), Expect = 1.3
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = -2
Query: 581 PXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 402
P + I +T + R S E V + E ++D + +++NA + S +
Sbjct: 234 PDLSSLIRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLS 291
Query: 401 DEKLKEKISDSDKQTILDKCNDTIK 327
+ +KEK S +K DK + K
Sbjct: 292 ESSMKEKQSKIEKYMKSDKSSKNFK 316
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 28.3 bits (60), Expect = 1.3
Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = -2
Query: 536 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE-SYCFSMKSTMEDEKLKEKISDSDKQ 360
L+ + ++ + E E K+ ET++ KN+ + + ++ E LK +K
Sbjct: 485 LASKNSDKALAETNIRLQEVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKD 544
Query: 359 TILDKCNDTIKWLDSN--QLADK-EEYEHKQKELEGIYNPII 243
++++ IK + N +L +EY +K K+ E YN ++
Sbjct: 545 RLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVM 586
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 28.3 bits (60), Expect = 1.3
Identities = 20/100 (20%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -2
Query: 572 ENKITITNDKGRLSK-EEIERMVNEAEKYRNEDDKQKETIQAKNAL------ESYCFSMK 414
EN++ I N L K +++ R ++ +N+++ +++ A + L ++ +
Sbjct: 800 ENQLEIYNRYAALQKNQQLRRDDKRNKRSKNDEESDGKSLSAGHVLMQLRKAANHALLFR 859
Query: 413 STMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKE 294
+DEKLK+ D ++ N+ + D ++D E
Sbjct: 860 KFYDDEKLKQMAKDIMQEEQYKNANEQYIYEDMEVMSDFE 899
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -2
Query: 527 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 351
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 350 DKCNDTIKWLDSNQLADKEEYEHKQK 273
+ + + + D + + K+K
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRK 575
>SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit
Ssr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = -2
Query: 584 PPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM 405
PP + + G+ K+ E++V + +KY++ T N L+ + ++KS
Sbjct: 310 PPALWQEPNSMEELGKELKDNKEQLVKQDQKYQSLQGDLSYTDSMSNLLKEFS-NIKSAE 368
Query: 404 EDEKLKEKISD 372
E + L++KI +
Sbjct: 369 ECDVLQKKIEE 379
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.5 bits (58), Expect = 2.3
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = -2
Query: 539 RLSKEEIERMVNEAEKYRNEDDKQKETIQAK-NALESYCFSMKSTMEDEKLKEKISDSDK 363
+L++E +ER+ E ++YR + + E K +LE ++ + L+ + D
Sbjct: 950 KLAEEMVERVKTEYDEYRLQTSESLEKNHLKITSLEQRIVILQDEIASSSLRCENITKDS 1009
Query: 362 QTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIY 255
+T + + K L +N+L+ E + E E Y
Sbjct: 1010 ETRVALLLEENKHL-NNELSSHRNAEKQHLEKENDY 1044
Score = 26.2 bits (55), Expect = 5.3
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -2
Query: 551 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 375
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 374 DSDKQT 357
+D+ T
Sbjct: 695 -TDRLT 699
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 512 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 408
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.6 bits (56), Expect = 4.0
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = -2
Query: 509 VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTI 330
+NE + Y + + Q +T + L S C + S L + D + +L C I
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 329 KWLDSNQLADKEEYEHKQKELEGIYNPI 246
DS + ++E K + I N I
Sbjct: 888 CVKDSIKRLGDNKFEDKSLRICTIPNSI 915
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -2
Query: 482 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 321
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -2
Query: 572 ENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 402
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 5.3
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = -2
Query: 530 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 378
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 377 SDSDKQTILDKCND 336
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 5.3
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -2
Query: 527 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 357
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 5.3
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -2
Query: 563 ITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 387
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 386 EKISDSDKQTILDKC 342
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 5.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 220 EESPEVCRASRAEHPEPE 167
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -2
Query: 533 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 411
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 545 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 435
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 7.0
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -2
Query: 479 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLA 303
D ++E I A AL + E+ I +K T+ D+ NDT +WLD +L
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLG 237
Query: 302 DK 297
DK
Sbjct: 238 DK 239
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = -2
Query: 530 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 351
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 350 D 348
D
Sbjct: 451 D 451
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = -2
Query: 530 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 351
+EE E+ + E K R + DK++E + + LE + + + K+ + + +
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGS 753
Query: 350 DKC 342
D C
Sbjct: 754 DGC 756
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.4 bits (53), Expect = 9.3
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -2
Query: 569 NKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEK 393
NK+ + G + + E E EAE ++ ++D+ ++E ++ L S S E+E+
Sbjct: 187 NKVLAARE-GLIDEGEEEEEREEAELEFVSDDEDEEEISDLEDWLGSDQSMETSESEEEE 245
Query: 392 LKEKISDSDK 363
E SD D+
Sbjct: 246 SSESESDEDE 255
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 449 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 324
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 25.4 bits (53), Expect = 9.3
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = -2
Query: 485 NEDDKQKETIQAK-NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQ 309
NE + Q + ++ K N + + E+ +K + + D L+ + + L N
Sbjct: 590 NELNSQIDELKLKLNEANKKYQELAISFENSNVKTQSVEPDNGLSLEALKNENQTLLKNL 649
Query: 308 LADKEEYEHKQKELEGIYNPI 246
YEH QK + ++N +
Sbjct: 650 EDSTARYEHLQKSFKNVFNQL 670
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,840,639
Number of Sequences: 5004
Number of extensions: 55868
Number of successful extensions: 277
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 267
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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