Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_K11
(761 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0304 + 17112677-17113195 34 0.14
03_03_0262 + 15968884-15969687 33 0.33
10_08_0324 + 16747117-16747330,16747432-16747559,16747675-167477... 32 0.43
03_05_0172 - 21488504-21488752,21488862-21489611,21489691-214897... 32 0.43
09_04_0347 + 16887182-16888504 31 0.76
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 31 1.0
03_02_0146 + 5916692-5917931,5918198-5918261,5918836-5919057,591... 31 1.3
12_01_0790 + 7216452-7216489,7216664-7216722,7217268-7218750,721... 30 1.7
03_06_0517 + 34466743-34466879,34468478-34468588,34468997-344690... 29 3.1
02_02_0471 - 10714440-10714846,10714947-10715034,10715427-107155... 29 3.1
03_06_0741 + 35893538-35895600,35896274-35896474,35896701-358968... 29 4.0
12_02_1128 - 26341118-26341204,26341302-26341441,26341567-263416... 29 5.3
07_03_0959 - 22885750-22886001,22886073-22886195,22886343-228864... 29 5.3
04_03_1025 + 21803807-21805249 28 7.1
02_05_1275 - 35395228-35395642,35396682-35397250 28 7.1
10_08_1035 - 22466674-22466855,22467171-22467373,22467541-224677... 28 9.3
09_04_0430 + 17502387-17503505 28 9.3
07_03_0072 - 13051145-13052362 28 9.3
06_01_1013 - 7931756-7935109 28 9.3
05_01_0471 - 3751497-3751522,3751760-3751800,3752466-3752507,375... 28 9.3
>12_02_0304 + 17112677-17113195
Length = 172
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = -2
Query: 586 PNRPGAQSTEKPAEATSTNGAASAAPDIAKPSESNLPTETKPEQPAAGPLKQIFENSAVL 407
P+ A S AE T A + P + PS+ + T+P P+ G Q + +
Sbjct: 40 PSPRRAPSPSVTAEPTPAPVIAPSPPPVVAPSQPLVVAPTQPPTPSGG--SQCLRENVIA 97
Query: 406 QGIAGAVKKIQTTVNNPVK 350
+ G + + T +NNP K
Sbjct: 98 LNVCGQL-DLSTLLNNPTK 115
>03_03_0262 + 15968884-15969687
Length = 267
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 547 EATSTNGAASAAPDIAKPSESNLPTETKPEQPAAGPL 437
+A T GAA+A P PS + P QP+AGP+
Sbjct: 170 DAVRTGGAAAATPPPPPPSSHHQQQPAFPPQPSAGPI 206
>10_08_0324 +
16747117-16747330,16747432-16747559,16747675-16747744,
16747832-16747988,16748089-16748701,16749132-16749653,
16749686-16750279,16750359-16750709,16750808-16751395
Length = 1078
Score = 32.3 bits (70), Expect = 0.43
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 627 PEKRPEGACDC*PLWFC 677
PEKRP+ CDC P W C
Sbjct: 602 PEKRPKMTCDCWPSWCC 618
>03_05_0172 -
21488504-21488752,21488862-21489611,21489691-21489789,
21489862-21490776,21490847-21490976,21491438-21491583,
21491801-21491896,21492521-21492613,21492702-21492755,
21492897-21492956,21493046-21493171,21493283-21493366,
21493444-21493587,21493667-21493963
Length = 1080
Score = 32.3 bits (70), Expect = 0.43
Identities = 26/91 (28%), Positives = 41/91 (45%)
Frame = -2
Query: 592 LQPNRPGAQSTEKPAEATSTNGAASAAPDIAKPSESNLPTETKPEQPAAGPLKQIFENSA 413
L PN A PA A +++ A A+P +KP +PT P AA +Q +
Sbjct: 39 LHPNLAAASPPMSPA-AKNSSAAPGASPRSSKP----VPTSAAPPSKAAAEGEQASAPAN 93
Query: 412 VLQGIAGAVKKIQTTVNNPVKPRDSEVVEET 320
+ V +++ TV+ PV +D V +T
Sbjct: 94 EAPAVK-VVVRVRPTVSRPVDGKDLFFVRKT 123
>09_04_0347 + 16887182-16888504
Length = 440
Score = 31.5 bits (68), Expect = 0.76
Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 12/104 (11%)
Frame = -2
Query: 592 LQPNRPGAQSTEKPAEATSTNGAASAAPDI-----------AKPSESNLPTETKPE-QPA 449
+ P RP ++ A A + G+AS D + PS S P P + A
Sbjct: 1 MAPKRPAEEADAAAAAAAAAGGSASEGSDAEASAEAARGHGSSPSPSKTPPPANPNPKSA 60
Query: 448 AGPLKQIFENSAVLQGIAGAVKKIQTTVNNPVKPRDSEVVEETK 317
A P + ++ +GA NP PR EV +++
Sbjct: 61 AAPPSAVAAPASAAGSDSGAASDSPRAAGNPSGPRSIEVNSDSE 104
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -2
Query: 580 RPGAQSTEKPAEATSTNGAASAAPDIAKPSESNLPTETKPEQPAA 446
+P A STE A S + +ASA A P+ + P T PE A
Sbjct: 706 QPAAYSTEATTAAASQDQSASAPATGAAPATTAAPAPTAPENSGA 750
>03_02_0146 +
5916692-5917931,5918198-5918261,5918836-5919057,
5919626-5919747,5920105-5920170,5920192-5920386,
5920480-5921057,5921818-5921968,5922465-5922715
Length = 962
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/82 (26%), Positives = 32/82 (39%)
Frame = -2
Query: 592 LQPNRPGAQSTEKPAEATSTNGAASAAPDIAKPSESNLPTETKPEQPAAGPLKQIFENSA 413
+ PNRPG T K + T+ + A+ S + P P A S
Sbjct: 100 ISPNRPG---TAKNVHSVVTSCISPNLTGKAENGHSLATSGISPNCPGAVKKIHSLATSP 156
Query: 412 VLQGIAGAVKKIQTTVNNPVKP 347
+ GAVKKI + +P+ P
Sbjct: 157 ISPNWPGAVKKIHSLATSPISP 178
>12_01_0790 +
7216452-7216489,7216664-7216722,7217268-7218750,
7218828-7218892,7219023-7219080,7219152-7219262,
7219332-7219410,7219521-7219613,7219701-7219886
Length = 723
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -2
Query: 520 SAAPDIAKPSESNLPTETKPEQPAAGPL--KQIFENSAVLQGIAGAVKKIQTTVNNPVKP 347
S P +A+P +S + + +PE P A PL K + +S + + + V +P P
Sbjct: 262 SHPPVVARPRDSPIASPPRPEPPVASPLGPKPLVASSRGPEPPVASPPVPEPPVASPPVP 321
Query: 346 RDSEVVEETKSDQEK 302
TK D E+
Sbjct: 322 EPPVASPRTKKDAEE 336
>03_06_0517 +
34466743-34466879,34468478-34468588,34468997-34469079,
34469287-34469404,34469503-34469714,34470167-34470651,
34470731-34470801,34470898-34470955,34471161-34471192,
34471193-34471449,34471820-34471974,34472353-34472636,
34472725-34472842,34473574-34473756,34473848-34474162
Length = 872
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/92 (21%), Positives = 37/92 (40%)
Frame = -2
Query: 583 NRPGAQSTEKPAEATSTNGAASAAPDIAKPSESNLPTETKPEQPAAGPLKQIFENSAVLQ 404
++P + K +++ STN + + D K + P E+KP + N +
Sbjct: 207 DKPVVNESSKESQSRSTNDSTTRGVDSMKHASKEEPVESKPNSTRGQENMDVLNN--LNS 264
Query: 403 GIAGAVKKIQTTVNNPVKPRDSEVVEETKSDQ 308
AG + TT N + + + KS+Q
Sbjct: 265 TDAGNNSSLSTTTENASHVQRRLLQTDEKSNQ 296
>02_02_0471 -
10714440-10714846,10714947-10715034,10715427-10715516,
10715614-10715727
Length = 232
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = -2
Query: 577 PGAQSTEKPAEATSTNGAASAAPDIAKPSESNLP 476
P A E P EA +T AA AAP AK E P
Sbjct: 199 PAAAEAEPPVEAAATPAAAEAAP--AKAEEEEAP 230
>03_06_0741 +
35893538-35895600,35896274-35896474,35896701-35896814,
35897570-35897649,35897772-35897896,35898008-35898079
Length = 884
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -2
Query: 604 FLNLLQPNR-PGAQSTEKPAEATSTNGAASAAPDIAKPSE 488
FL L P + PG + KP+ A ST+ ++S++P +A+ E
Sbjct: 13 FLFLSPPGKLPGGKPRLKPSCAASTSSSSSSSPSLAEQLE 52
>12_02_1128 -
26341118-26341204,26341302-26341441,26341567-26341663,
26341755-26341830,26341919-26342118,26342199-26342297,
26342395-26342479,26342786-26343024,26343233-26343403,
26343605-26343848,26343980-26344253,26344755-26344934,
26345342-26345423,26346209-26346278,26346802-26346901,
26347003-26347097,26347181-26347317,26347342-26347420,
26347591-26347651,26348580-26349009
Length = 981
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/89 (22%), Positives = 36/89 (40%)
Frame = -2
Query: 568 QSTEKPAEATSTNGAASAAPDIAKPSESNLPTETKPEQPAAGPLKQIFENSAVLQGIAGA 389
+ T +PA TS +GA +A P ++ T+ PE +++ + L + A
Sbjct: 459 EQTGQPATITSPDGAVVLGTPVAAPVNGDMYTDISPENAVIQGQRRMSKGVDYLVEASAA 518
Query: 388 VKKIQTTVNNPVKPRDSEVVEETKSDQEK 302
+ + VK R E D+E+
Sbjct: 519 EAEAISATLAAVKARQVNGEAEHSPDREQ 547
>07_03_0959 -
22885750-22886001,22886073-22886195,22886343-22886429,
22886504-22886555,22886701-22886825,22887002-22887213,
22887317-22887518,22887928-22888032,22889643-22889704,
22889998-22890187,22890260-22890355,22890442-22890544,
22891448-22891551,22893284-22893370,22894033-22894118,
22894397-22894489,22895615-22895777,22895899-22896011,
22896113-22896235,22897393-22897444,22897843-22897886,
22897975-22898048,22898133-22898224,22899374-22899441,
22900817-22900892,22900952-22901215
Length = 1015
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -2
Query: 583 NRPGAQST-EKPAEATSTNGAASAAPDIAKPSESNLPTETKPEQPAAGPLKQIFENS 416
+RP ++T + PAE +S +GA +AAP A +E + T+P G + + N+
Sbjct: 4 SRPARETTTDAPAEPSS-DGAVAAAPSAAAAAEGDAEI-TRPRNDKRGYRRVVLPNA 58
>04_03_1025 + 21803807-21805249
Length = 480
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -2
Query: 604 FLNLLQPNRPGAQSTEKPAEATSTNGAASAAP 509
FL L P RPGA +T KP +S N A+A P
Sbjct: 132 FLASLAPPRPGAAATTKP---SSANAYAAAFP 160
>02_05_1275 - 35395228-35395642,35396682-35397250
Length = 327
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 474 VGRFDSDGFAMSGAALAAPFVLVASAGFSVD*APGLFGCKRFR 602
+GR G A + A L A +V +A +PG++ + FR
Sbjct: 4 IGRRQQQGVAAAAATLVALMAVVVAAAAEAQPSPGVYPSRMFR 46
>10_08_1035 -
22466674-22466855,22467171-22467373,22467541-22467729,
22467847-22467962,22468650-22468764,22469055-22469156,
22469225-22469361
Length = 347
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 494 WFRNVWSGTRGSVRTSRFSGFLSRLSTRPIW 586
W + +SG++G ++ S LST P+W
Sbjct: 188 WIKGAFSGSKGDMQDSLLQNLHFILSTSPMW 218
>09_04_0430 + 17502387-17503505
Length = 372
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 589 QPNRPGAQSTEKPAEATSTNGAASAAPDIAKPSESNLPTETKPEQPAAGPLKQ 431
QPN P +T AEA GA + AP A ++P KP + G K+
Sbjct: 309 QPNTPWLGTTGG-AEADGVAGAENGAPVSAAVEVQSVPKPAKPVRVKVGAKKR 360
>07_03_0072 - 13051145-13052362
Length = 405
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 723 RK*ATFLIPRDKTVTNKTRAVNSRRRL 643
R+ TFL+PR + R NSRRR+
Sbjct: 51 RQAMTFLLPRQHEFKQRLRGANSRRRM 77
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 399 MPCRTALFSKICFNGPAAGCSGFVSVGRF 485
+PCR K+C GP C+ +S F
Sbjct: 321 LPCRRHRCEKVCHTGPCGDCNVLISARCF 349
>05_01_0471 -
3751497-3751522,3751760-3751800,3752466-3752507,
3753249-3753310,3753398-3753584,3753692-3753826,
3753872-3753948,3754005-3754076,3754389-3754588,
3754675-3755020,3755463-3755519,3755655-3757433,
3757539-3757720,3757943-3758072
Length = 1111
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -2
Query: 490 ESNLPTETKPEQPAAGPLKQIFENSAVLQGIAGAVKKI--QTTVNNPVKPRDSEVVEETK 317
+ +LP ETK A P + + E + V GI+ + + +T VN + + V EETK
Sbjct: 596 DQHLPEETKFNVSLAYPDQHVPEETQVTAGISCPDQHVPEETQVNASLPSPNQHVPEETK 655
Query: 316 S 314
+
Sbjct: 656 A 656
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,340,418
Number of Sequences: 37544
Number of extensions: 274250
Number of successful extensions: 997
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -