Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_K09
         (790 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    27   0.50 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.66 
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   8.1  

>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 27.5 bits (58), Expect = 0.50
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 165 YWNTERKEGWECGGSGADHVPRGRSQA*KCCPAITESH 52
           YW +   +GW CG S AD      +   +C   I E H
Sbjct: 715 YWCSPPGKGWVCGLSCADLEDNDLTDDVECMKTIYEEH 752


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.1 bits (57), Expect = 0.66
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
 Frame = +1

Query: 346 RPPHQ----QPSKAPRSHAVQRPLPSGAF---RPPAPYQRAGSRGPQ--LRPGYRDR 489
           RPP+     +P  +P++  +   +PSG     RPP P Q     GP   +RP + +R
Sbjct: 267 RPPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAPGGPPQGMRPNFYNR 323



 Score = 24.6 bits (51), Expect = 3.5
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 352 PHQQPSKAPRSHAVQRPLPSGAFRPPAPYQRAGSRGPQLRP 474
           P  QP + P +  +QRP   G   P  P    G   PQ+ P
Sbjct: 242 PGMQP-RPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISP 281



 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 675 VAGVPSFPIPVASGAPTGP 619
           + G P  P+P+  GAP GP
Sbjct: 294 MVGPPRPPMPMQGGAPGGP 312


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +1

Query: 358 QQPSKAPRSHAVQRPLPSGAF-RPPAP 435
           +QP KAP   AV RPL +      PAP
Sbjct: 608 RQPCKAPDQAAVTRPLMAADLGAGPAP 634


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,123
Number of Sequences: 2352
Number of extensions: 12897
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)