Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_K07
         (790 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0657 + 5322295-5323367,5323436-5323555,5323743-5323791,532...    28   9.7  
07_03_1785 - 29502658-29503009,29503115-29503174,29503271-29503479     28   9.7  

>11_01_0657 +
           5322295-5323367,5323436-5323555,5323743-5323791,
           5323968-5324084,5324200-5324268,5324394-5324488,
           5325183-5325521,5327043-5327084,5327814-5327907,
           5328121-5328190,5328719-5329677
          Length = 1008

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = -3

Query: 728 ATYLDTQLPSNGXPSPSRTDIFLGHPTLHRGGPRVLGIHRVTMRPPH 588
           +T L TQ   N   S +   +  GHP   R GP  L  HR    PPH
Sbjct: 494 STNLSTQDMQNNCNSNAAPLLSSGHPASGRMGPTPLCTHRT---PPH 537


>07_03_1785 - 29502658-29503009,29503115-29503174,29503271-29503479
          Length = 206

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -3

Query: 671 DIFLGHP-TLHRGGPRVLGIH 612
           +I +GHP T   GGPR LG+H
Sbjct: 66  EIGIGHPVTSKSGGPRQLGVH 86


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,283,928
Number of Sequences: 37544
Number of extensions: 280021
Number of successful extensions: 730
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)