Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_K04
         (779 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1210 + 24903389-24903695,24904383-24904468,24904545-249046...    29   4.1  
03_02_0630 + 9964593-9964738,9965548-9965603,9965895-9966745,996...    28   7.2  
05_06_0278 + 26894802-26895362                                         28   9.6  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    28   9.6  

>07_03_1210 +
           24903389-24903695,24904383-24904468,24904545-24904649,
           24904737-24905531,24905719-24905941,24906318-24906712
          Length = 636

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +1

Query: 160 ADGSGVGNIA*TSLWTRWFLRSAVIDWCHSFVPDTGLA 273
           ADG G G  A      +W  R  V+DW  SF+P   LA
Sbjct: 69  ADGGGPGVFA-----RKWRSRREVVDWLASFLPAKSLA 101


>03_02_0630 +
           9964593-9964738,9965548-9965603,9965895-9966745,
           9966848-9967046,9967246-9967425,9967591-9967967,
           9968625-9968765
          Length = 649

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/55 (27%), Positives = 32/55 (58%)
 Frame = -1

Query: 332 NIILTQMGTGSLQLPGGAVTANPVSGTKEWHQSITADLRNHLVHKLVQAIFPTPD 168
           ++ ++Q+G+  L      V  +P+ GTK+W  +IT D  + ++++L  A+  + D
Sbjct: 362 SVTVSQVGS-DLPSTTAPVGLSPLGGTKDWQPTITVD-EDGILNQLRTALLHSRD 414


>05_06_0278 + 26894802-26895362
          Length = 186

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = -3

Query: 306 GIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGD 157
           G PP P  +R      G +G        +  PPSPQ G S    T+P+ D
Sbjct: 78  GAPPPPQSNRPVTPLAGVDGGVSGGRAPTNTPPSPQPGGS----TKPLSD 123


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
 Frame = -3

Query: 306  GIPPAPGWSRDRQSSIGNEGVAP----IDHG*SQKPPSPQTGSSDIPDTRPIG 160
            GIPP P        ++G+ GVAP    I  G +  PP P  G + +P   PIG
Sbjct: 1080 GIPPLPP---PLPPTLGDYGVAPPPPSIGAG-APPPPPPPGGITGVPPPPPIG 1128


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,368,596
Number of Sequences: 37544
Number of extensions: 315076
Number of successful extensions: 963
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)