Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_K04
         (779 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr...    82   4e-16
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr...    82   4e-16
Z30215-7|CAA82940.1|  322|Caenorhabditis elegans Hypothetical pr...    68   9e-12
Z29560-13|CAA82665.1|  322|Caenorhabditis elegans Hypothetical p...    68   9e-12
U41549-3|AAA83283.2|  245|Caenorhabditis elegans Hypothetical pr...    38   0.011
Z93385-10|CAB07643.1|  702|Caenorhabditis elegans Hypothetical p...    37   0.019
Z81114-7|CAB03290.1|  702|Caenorhabditis elegans Hypothetical pr...    37   0.019
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p...    31   0.92 
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p...    31   0.92 
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p...    31   0.92 

>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
           protein R10E11.1b protein.
          Length = 2056

 Score = 82.2 bits (194), Expect = 4e-16
 Identities = 37/59 (62%), Positives = 45/59 (76%)
 Frame = -1

Query: 254 TKEWHQSITADLRNHLVHKLVQAIFPTPDPSAMLDKRMHNLVAYARKVEGDMYEMACTR 78
           TKEWH  +T DLRNHLV KLV+AIFP P+  AM D R+ +L+AYARKVE +M+E A  R
Sbjct: 595 TKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYARKVEKEMFESANDR 653


>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
           protein R10E11.1a protein.
          Length = 2045

 Score = 82.2 bits (194), Expect = 4e-16
 Identities = 37/59 (62%), Positives = 45/59 (76%)
 Frame = -1

Query: 254 TKEWHQSITADLRNHLVHKLVQAIFPTPDPSAMLDKRMHNLVAYARKVEGDMYEMACTR 78
           TKEWH  +T DLRNHLV KLV+AIFP P+  AM D R+ +L+AYARKVE +M+E A  R
Sbjct: 584 TKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYARKVEKEMFESANDR 642


>Z30215-7|CAA82940.1|  322|Caenorhabditis elegans Hypothetical
           protein K03H1.10 protein.
          Length = 322

 Score = 67.7 bits (158), Expect = 9e-12
 Identities = 33/59 (55%), Positives = 43/59 (72%)
 Frame = -1

Query: 254 TKEWHQSITADLRNHLVHKLVQAIFPTPDPSAMLDKRMHNLVAYARKVEGDMYEMACTR 78
           TKEWH+ +T DLRNH+V KLV+AI P P+   M D R+ +L AYARKVE +++E A  R
Sbjct: 166 TKEWHRQVTNDLRNHIVGKLVKAICPAPE--MMNDIRLKDLNAYARKVEKEVFETAIDR 222


>Z29560-13|CAA82665.1|  322|Caenorhabditis elegans Hypothetical
           protein K03H1.10 protein.
          Length = 322

 Score = 67.7 bits (158), Expect = 9e-12
 Identities = 33/59 (55%), Positives = 43/59 (72%)
 Frame = -1

Query: 254 TKEWHQSITADLRNHLVHKLVQAIFPTPDPSAMLDKRMHNLVAYARKVEGDMYEMACTR 78
           TKEWH+ +T DLRNH+V KLV+AI P P+   M D R+ +L AYARKVE +++E A  R
Sbjct: 166 TKEWHRQVTNDLRNHIVGKLVKAICPAPE--MMNDIRLKDLNAYARKVEKEVFETAIDR 222


>U41549-3|AAA83283.2|  245|Caenorhabditis elegans Hypothetical
           protein F22F1.3 protein.
          Length = 245

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -1

Query: 233 ITADLRNHLVHKLVQAIFPTPDPSAMLDKRMHNLVAYARKVEGDMY 96
           IT  +R H++ KL   +FP PD +A  D RM  ++   R +E + +
Sbjct: 137 ITRRIRIHVIDKLGLMLFPAPDQNAYYDGRMDRIIRKLRNLEAEAF 182


>Z93385-10|CAB07643.1|  702|Caenorhabditis elegans Hypothetical
           protein M01E5.6 protein.
          Length = 702

 Score = 36.7 bits (81), Expect = 0.019
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
 Frame = -1

Query: 254 TKEWHQSITADLRNHLVHKLVQAIFP-TPDPSAMLDKRMHNLVAYARKVEGDMYEMACTR 78
           +KEW   I  D+RNH+V KL++A +P   +   M  +    L+A ARK E ++ E +  R
Sbjct: 599 SKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASNDR 655


>Z81114-7|CAB03290.1|  702|Caenorhabditis elegans Hypothetical
           protein M01E5.6 protein.
          Length = 702

 Score = 36.7 bits (81), Expect = 0.019
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
 Frame = -1

Query: 254 TKEWHQSITADLRNHLVHKLVQAIFP-TPDPSAMLDKRMHNLVAYARKVEGDMYEMACTR 78
           +KEW   I  D+RNH+V KL++A +P   +   M  +    L+A ARK E ++ E +  R
Sbjct: 599 SKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASNDR 655


>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
            protein K07E12.1b protein.
          Length = 12268

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = -3

Query: 318  SDGDGIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGDAR*TDA 139
            +D +GIP +   S+    + GN  + P D G ++  P+ +T  +  P T+P G    TD+
Sbjct: 4278 TDENGIPLSKDGSQLPTDNNGNYVLVPSDEGATKTHPTDETSDAVHPITKPDGTPLATDS 4337



 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = -3

Query: 318  SDGDGIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGDAR*TDA 139
            +D  G P +   S     ++GN  + P D G  +  P+ ++G++  P T+P G    TD+
Sbjct: 7326 TDASGKPLSADGSPLPTDAVGNYILVPSDDGVIRTHPTDESGNTIYPITKPDGTPLATDS 7385



 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = -3

Query: 318  SDGDGIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGDAR*TDA 139
            +D  G P +   S     ++GN  + P D G  +  P+ ++G++  P T+P G    TD+
Sbjct: 8100 TDASGKPLSADGSPLPTDAVGNYILVPSDDGVIRTHPTDESGNTIYPITKPDGTPLATDS 8159



 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = -3

Query: 318   SDGDGIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGDAR*TDA 139
             +D  G P +   S     ++GN  + P D G  +  P+ ++G++  P T+P G    TD+
Sbjct: 9863  TDASGKPLSADGSPLPTDAVGNYILVPSDDGVIRTHPTDESGNTIYPITKPDGTPLATDS 9922



 Score = 28.7 bits (61), Expect = 4.9
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = -3

Query: 318  SDGDGIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGDAR*TDA 139
            +D +GIP +   S     + GN  + P D G +++ P+  + S   P T+P G    TD+
Sbjct: 5144 TDENGIPLSKDGSPLPTDNTGNYVLVPSDEGATEEKPTQGSESIVHPITKPDGTPLATDS 5203



 Score = 28.3 bits (60), Expect = 6.5
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = -3

Query: 321  NSDGDGIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGDAR*TD 142
            ++D  G P +   S     + GN  + P D   ++  P+ ++G+  IP T P G +  TD
Sbjct: 3183 STDSSGKPLSKDGSPLPTDNNGNYVLVPTDESTTKALPTDESGNVVIPITNPDGTSLATD 3242

Query: 141  A 139
            +
Sbjct: 3243 S 3243


>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
            protein K07E12.1a protein.
          Length = 13100

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = -3

Query: 318  SDGDGIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGDAR*TDA 139
            +D +GIP +   S+    + GN  + P D G ++  P+ +T  +  P T+P G    TD+
Sbjct: 4323 TDENGIPLSKDGSQLPTDNNGNYVLVPSDEGATKTHPTDETSDAVHPITKPDGTPLATDS 4382



 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = -3

Query: 318  SDGDGIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGDAR*TDA 139
            +D  G P +   S     ++GN  + P D G  +  P+ ++G++  P T+P G    TD+
Sbjct: 7371 TDASGKPLSADGSPLPTDAVGNYILVPSDDGVIRTHPTDESGNTIYPITKPDGTPLATDS 7430



 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = -3

Query: 318  SDGDGIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGDAR*TDA 139
            +D  G P +   S     ++GN  + P D G  +  P+ ++G++  P T+P G    TD+
Sbjct: 8145 TDASGKPLSADGSPLPTDAVGNYILVPSDDGVIRTHPTDESGNTIYPITKPDGTPLATDS 8204



 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = -3

Query: 318   SDGDGIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGDAR*TDA 139
             +D  G P +   S     ++GN  + P D G  +  P+ ++G++  P T+P G    TD+
Sbjct: 9908  TDASGKPLSADGSPLPTDAVGNYILVPSDDGVIRTHPTDESGNTIYPITKPDGTPLATDS 9967



 Score = 28.7 bits (61), Expect = 4.9
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = -3

Query: 318  SDGDGIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGDAR*TDA 139
            +D +GIP +   S     + GN  + P D G +++ P+  + S   P T+P G    TD+
Sbjct: 5189 TDENGIPLSKDGSPLPTDNTGNYVLVPSDEGATEEKPTQGSESIVHPITKPDGTPLATDS 5248



 Score = 28.3 bits (60), Expect = 6.5
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = -3

Query: 321  NSDGDGIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGDAR*TD 142
            ++D  G P +   S     + GN  + P D   ++  P+ ++G+  IP T P G +  TD
Sbjct: 3228 STDSSGKPLSKDGSPLPTDNNGNYVLVPTDESTTKALPTDESGNVVIPITNPDGTSLATD 3287

Query: 141  A 139
            +
Sbjct: 3288 S 3288


>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
            protein.
          Length = 13100

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = -3

Query: 318  SDGDGIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGDAR*TDA 139
            +D +GIP +   S+    + GN  + P D G ++  P+ +T  +  P T+P G    TD+
Sbjct: 4323 TDENGIPLSKDGSQLPTDNNGNYVLVPSDEGATKTHPTDETSDAVHPITKPDGTPLATDS 4382



 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = -3

Query: 318  SDGDGIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGDAR*TDA 139
            +D  G P +   S     ++GN  + P D G  +  P+ ++G++  P T+P G    TD+
Sbjct: 7371 TDASGKPLSADGSPLPTDAVGNYILVPSDDGVIRTHPTDESGNTIYPITKPDGTPLATDS 7430



 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = -3

Query: 318  SDGDGIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGDAR*TDA 139
            +D  G P +   S     ++GN  + P D G  +  P+ ++G++  P T+P G    TD+
Sbjct: 8145 TDASGKPLSADGSPLPTDAVGNYILVPSDDGVIRTHPTDESGNTIYPITKPDGTPLATDS 8204



 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = -3

Query: 318   SDGDGIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGDAR*TDA 139
             +D  G P +   S     ++GN  + P D G  +  P+ ++G++  P T+P G    TD+
Sbjct: 9908  TDASGKPLSADGSPLPTDAVGNYILVPSDDGVIRTHPTDESGNTIYPITKPDGTPLATDS 9967



 Score = 28.7 bits (61), Expect = 4.9
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = -3

Query: 318  SDGDGIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGDAR*TDA 139
            +D +GIP +   S     + GN  + P D G +++ P+  + S   P T+P G    TD+
Sbjct: 5189 TDENGIPLSKDGSPLPTDNTGNYVLVPSDEGATEEKPTQGSESIVHPITKPDGTPLATDS 5248



 Score = 28.3 bits (60), Expect = 6.5
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = -3

Query: 321  NSDGDGIPPAPGWSRDRQSSIGNEGVAPIDHG*SQKPPSPQTGSSDIPDTRPIGDAR*TD 142
            ++D  G P +   S     + GN  + P D   ++  P+ ++G+  IP T P G +  TD
Sbjct: 3228 STDSSGKPLSKDGSPLPTDNNGNYVLVPTDESTTKALPTDESGNVVIPITNPDGTSLATD 3287

Query: 141  A 139
            +
Sbjct: 3288 S 3288


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,555,708
Number of Sequences: 27780
Number of extensions: 227503
Number of successful extensions: 667
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)