Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_K02
(779 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 40 5e-04
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 35 0.011
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 34 0.020
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 31 0.24
SPBC18E5.11c |edc3|SPBC23G7.01c|enhancer of mRNA decapping Edc3 ... 30 0.43
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 29 0.57
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.75
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 29 0.99
SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synth... 28 1.3
SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces pomb... 27 2.3
SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3 s... 27 2.3
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.0
SPBC2G2.04c |mmf1|pmf1|YjgF family protein Mmf1|Schizosaccharomy... 27 3.0
SPAC1782.03 |||microfibrillar-associated protein family protein|... 27 4.0
SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces... 27 4.0
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 5.3
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 26 5.3
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 26 5.3
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 26 7.0
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 7.0
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.2
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 25 9.2
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 25 9.2
SPAC22H10.13 |zym1||metallothionein |Schizosaccharomyces pombe|c... 25 9.2
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 39.5 bits (88), Expect = 5e-04
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -1
Query: 329 NRSSNRQSDGTPMEQSTAASSSQ--SPGGREDNFTTQLNHMHEMGLLDDALNVRALLICS 156
N S+N + P +++ SS S + + L+ +H+MG DD++N AL +
Sbjct: 125 NHSTNSKPPSLPPRTKSSSQSSPMASTSTSKSRYADSLSTLHDMGFSDDSVNTHALEETN 184
Query: 155 GDVNAAINLV 126
GDV AI +
Sbjct: 185 GDVTRAIEKI 194
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 35.1 bits (77), Expect = 0.011
Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 2/113 (1%)
Frame = -1
Query: 485 STPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPS-RSVITPEMFSEAISEAINRSSNRQ 309
S P S H S + S+ SST GPS ++++ SE ++ + N
Sbjct: 149 SVPSSSSSYHSSSMTTSGLSSSASIVSSTYRDGPSIITLVSTSYVSEVVTPTTTNNWNSS 208
Query: 308 SDGTPMEQSTAASSSQSPGGR-EDNFTTQLNHMHEMGLLDDALNVRALLICSG 153
S T ST SSS S G NH+ + A+ V +LI G
Sbjct: 209 SSFTSSTSSTPISSSYSSSGTLPSKSNKSSNHVGVVVGCSVAIPVGVVLILIG 261
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 34.3 bits (75), Expect = 0.020
Identities = 25/79 (31%), Positives = 41/79 (51%)
Frame = -1
Query: 473 SGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTP 294
SG S ES + SS + S+ +S S S + E S++ S + + S S+G+
Sbjct: 105 SGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSED-SDSSSSSSDSESESSSEGS- 162
Query: 293 MEQSTAASSSQSPGGREDN 237
+ S+++SSS+S EDN
Sbjct: 163 -DSSSSSSSSESESSSEDN 180
Score = 31.1 bits (67), Expect = 0.19
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = -1
Query: 485 STPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQS 306
S S G S + SS + S+ +S S S + E S++ S + + S S
Sbjct: 155 SESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSED-SDSSSSSSDSESESSS 213
Query: 305 DGTPMEQSTAASSSQSPGGREDN 237
+G+ + S+++SSS+S EDN
Sbjct: 214 EGS--DSSSSSSSSESESSSEDN 234
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 30.7 bits (66), Expect = 0.24
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = -1
Query: 422 SSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQSPGGRE 243
++ P +T +G + S + +++IN S+ S+G ST A+ S E
Sbjct: 303 NTHPFLTTLANGHGVMDASGNHHSGSSNQSINADSSAGSEGVDEGTSTEANDESSEDDDE 362
Query: 242 DNFTTQLNHMHEMGLLDDA 186
DN T + N + + D++
Sbjct: 363 DNNTDEANEDAQSNVSDES 381
>SPBC18E5.11c |edc3|SPBC23G7.01c|enhancer of mRNA decapping Edc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 454
Score = 29.9 bits (64), Expect = 0.43
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -1
Query: 482 TPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSS 318
TP S GS E+L + D + P T+G ITPE S+ I+ AI ++S
Sbjct: 181 TPGSKKGSRETLKKKPFV-DENIPAELHTTTGDILKPITPEQLSQGIALAIAKTS 234
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 29.5 bits (63), Expect = 0.57
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -1
Query: 419 SRPHSSTQTSGPSR--SVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQSPGGR 246
SRP SS SG + + I+ E I+ +S++ S P T++SSS +P
Sbjct: 732 SRPQSSGDASGFNTIFTSISQSSDGETSGYTISSNSSQNSASEPQTAFTSSSSSATPTIT 791
Query: 245 EDNFTTQLNHMHEM 204
+ + +T ++ M
Sbjct: 792 QSSISTSVSSQSSM 805
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 29.1 bits (62), Expect = 0.75
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -1
Query: 410 HSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQS 258
+SST S S S TP S S + + SS S S++ASSS S
Sbjct: 134 YSSTSASSTSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVS 184
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -1
Query: 383 SRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQS 258
S S + S I + + SS S TP ST +SSS S
Sbjct: 120 SDSTLAASTISGGIYSSTSASSTSSSTATPSSSSTTSSSSSS 161
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 28.7 bits (61), Expect = 0.99
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Frame = -1
Query: 443 RLLHAGDSSRPHSSTQT-SGPSRSV--ITPEMFSEAISEAI-NRSSNRQSDGTPMEQSTA 276
RL G+S +P T +G + V +T ++ + S+ I RS++ PM +
Sbjct: 18 RLAAKGESVKPSKKNGTKNGKDKEVDGVTKDLSELSTSDPIFERSASGVLTSQPMSRDIK 77
Query: 275 ASS-SQSPGGRE--DNFTTQLNHMHEMGLLDD 189
S + S GR +N T +LNH GLL D
Sbjct: 78 IDSYTLSFHGRLLIENATIELNHGQRYGLLGD 109
>SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synthase
Ade3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1323
Score = 28.3 bits (60), Expect = 1.3
Identities = 9/34 (26%), Positives = 22/34 (64%)
Frame = -2
Query: 328 TDPAIDKAMEHLWNKVLQHLHLKVPEEGKIILQH 227
++ + A+ HL++++ + L K+PEE ++ +H
Sbjct: 116 SEEMLKSALNHLYDRMTEALRFKLPEEDEVFDKH 149
>SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -1
Query: 722 TAHPELPIALRHLTNLVRSRSSTGSTPGDTAPTSGFAYS 606
+A +P+ RH+ + +R+R P D TSG +++
Sbjct: 137 SASQGIPLVRRHVADFIRARDGFDCEPSDIYLTSGASHA 175
>SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3
subunit Alp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 821
Score = 27.5 bits (58), Expect = 2.3
Identities = 27/97 (27%), Positives = 43/97 (44%)
Frame = -1
Query: 467 GGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPME 288
G +ES + + H DSSR + ST+TS ++IT +IS + S ++ +
Sbjct: 158 GLENESSISIAH--DSSRLNRSTETSSVQHTLITEADLLSSISYVLQGIS---TEYVQFK 212
Query: 287 QSTAASSSQSPGGREDNFTTQLNHMHEMGLLDDALNV 177
A S + P + Q+ + E GLL L V
Sbjct: 213 NELALLSKRIP----VQYLLQMRALSETGLLYQELKV 245
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 710 ELPIALRHLTNLVRSRSSTGSTPGDTAPTSG 618
+LP +H + L SSTGSTP +P G
Sbjct: 58 KLPPPPKHASQLRAGGSSTGSTPRTASPAVG 88
>SPBC2G2.04c |mmf1|pmf1|YjgF family protein Mmf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 162
Score = 27.1 bits (57), Expect = 3.0
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -1
Query: 203 GLLDDALNVRALLICSGDVNAAINLVFSGAIGDE 102
G + A+ ++ CSG + A V G +GD+
Sbjct: 51 GPYNQAIKANGVIYCSGQIPVANGKVIEGTVGDQ 84
>SPAC1782.03 |||microfibrillar-associated protein family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 355
Score = 26.6 bits (56), Expect = 4.0
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Frame = -1
Query: 419 SRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQS-------DGTPMEQSTAASSSQ 261
S H + SR VITP E ISE SSN Q+ D + E T ASS++
Sbjct: 38 SDSHDQENSISSSRHVITPVFEKEGISET-KTSSNFQNINPVQTIDNSASEYETDASSAE 96
>SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 725 ATAHPELPIALRHLTNLVRS 666
A HP LPIALR L N R+
Sbjct: 385 ARTHPNLPIALRTLFNKART 404
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.2 bits (55), Expect = 5.3
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = -1
Query: 422 SSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQSPGGRE 243
S P SG S++ P + S++ + + NRQS +P S+++ + GR+
Sbjct: 379 SPNPFLQPTFSGTSQASAHPSIHSQSATFNNTQDVNRQSVSSPKVVSSSSVTGSGASGRK 438
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 26.2 bits (55), Expect = 5.3
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 413 PHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSS 264
PH+ TQ I P+ FS A R+ ++ TP EQST+ + +
Sbjct: 331 PHNFTQRELREARRIIPQ-FSYDPPGASGRNRRERTSSTPSEQSTSVNET 379
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 26.2 bits (55), Expect = 5.3
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = -1
Query: 431 AGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQSPG 252
+ SS S ++ S S TP S + S + + SS+ + +S++ SSS++
Sbjct: 119 SSSSSSSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSRTTS 178
Query: 251 GR 246
R
Sbjct: 179 HR 180
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 25.8 bits (54), Expect = 7.0
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -1
Query: 461 SHESLLRLLHAGDSSR--PHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPME 288
++E + H+ SS P S + S+ + P M S+ +N + TP+
Sbjct: 108 ANEHSVNSAHSKSSSNASPESLNPSQMMSKRLSLPPMSQFTDSDFVNILRTPFAQSTPLN 167
Query: 287 QSTAASSSQSPGGRED 240
++T++ +++ P R+D
Sbjct: 168 RNTSSRNTEMPLVRKD 183
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 7.0
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 404 STQTSGPSRSVITPEMFSEAISEAINRSSNRQ-SDGTPMEQSTAASSSQS 258
+T S S SV P + S ++ SS+ Q TP+ S++ASS QS
Sbjct: 446 TTTVSSISTSVKQPTASVASSSVSVPSSSSVQPQSSTPISSSSSASSPQS 495
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 9.2
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -1
Query: 434 HAGDSSRPHSSTQTSGPSRSVITPEMFSEAI--SEAINRSSNRQSDGTPMEQSTAASSSQ 261
+ SS SS+ S S S +T S + S + + SS S + STA+SSS
Sbjct: 209 YLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSS 268
Query: 260 S 258
S
Sbjct: 269 S 269
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1
Query: 425 DSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQS 306
+S+ HS+ SG S ++I+P S A +AI S++ S
Sbjct: 423 NSNASHSAFSFSGISPAIISPSCSSHAFVKAIPSISSKFS 462
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = -1
Query: 269 SSQSPGGREDNFTTQLNHMHEMGLLDDALNVRALLICSGDVNAAINL 129
S S G + + + ++ ++ G + A N+R + ICSG++ A +
Sbjct: 954 SPMSQGDKMTSSESTVSTTYDFGF-EAAYNLRLIYICSGNIKLAFQI 999
>SPAC22H10.13 |zym1||metallothionein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 50
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 612 CKSRCGCSITRSRSG*RA*SNKICEVSQC 698
C+S+CGC + G ++ + C+ S C
Sbjct: 17 CQSKCGCQDCKESCGCKSSAVDNCKCSSC 45
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,777,192
Number of Sequences: 5004
Number of extensions: 50624
Number of successful extensions: 158
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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