Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_K02
(779 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0799 - 20650799-20650947,20651022-20651114,20651906-206519... 42 7e-04
03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,177... 39 0.005
10_08_0935 + 21670372-21671396,21672057-21672987 37 0.021
02_04_0347 + 22193708-22193720,22194317-22194390,22195388-221961... 31 1.4
12_02_1283 - 27532143-27532517,27532602-27532906,27533053-275333... 29 4.1
12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 29 5.5
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 29 5.5
01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769... 29 5.5
12_02_0858 + 23740589-23743233,23743362-23743503,23744778-237449... 28 7.2
09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539 28 7.2
02_01_0223 + 1453478-1453750,1455788-1456018,1456066-1456200,145... 28 7.2
06_03_0532 - 21844213-21844252,21844579-21844836,21845303-218455... 28 9.6
>10_08_0799 -
20650799-20650947,20651022-20651114,20651906-20651934,
20652039-20652097,20652170-20652283,20652374-20652534,
20652544-20652663,20652741-20653469,20654980-20655244
Length = 572
Score = 41.5 bits (93), Expect = 7e-04
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -1
Query: 245 EDNFTTQLNHMHEMGLLDDALNVRALLICSGDVNAAI 135
E+ + TQL + EMG +D A N++AL+ +G+VNAA+
Sbjct: 527 EELYATQLTQLREMGFIDTAENIQALVATAGNVNAAV 563
>03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,
1772689-1772747,1772816-1772929,1773030-1773238,
1773347-1774087,1775678-1776238,1776295-1776419,
1778187-1778317,1779020-1779178,1779471-1779728,
1780140-1780164,1780531-1780592,1780944-1781003,
1781112-1781219,1781703-1781838,1781880-1781929,
1782024-1782096,1782209-1782345,1782441-1782527,
1782624-1782721,1783259-1783369,1783685-1783769,
1783880-1783969
Length = 1259
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = -1
Query: 245 EDNFTTQLNHMHEMGLLDDALNVRALLICSGDVNAAINLVFSGAIG 108
E+ + TQL + EMG D N+RAL+ +G+V+AA+ + G IG
Sbjct: 1215 EELYATQLAQLQEMGFFDTQENIRALIATAGNVHAAVERLL-GNIG 1259
>10_08_0935 + 21670372-21671396,21672057-21672987
Length = 651
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = -1
Query: 422 SSRPHSSTQTSGPSRSV--ITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQSPGG 249
++ PHSS +SG + +V I P ++S + SS+ SDG+ STA + S + GG
Sbjct: 140 AASPHSSIDSSGAAATVTSIAPSCTVTSLSAKTSVSSSAASDGSGWSNSTAGAGSAAGGG 199
>02_04_0347 +
22193708-22193720,22194317-22194390,22195388-22196132,
22196203-22196417,22196505-22196786,22196870-22196998,
22197088-22197267,22197538-22197645,22197888-22198094
Length = 650
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Frame = -1
Query: 404 STQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPME----QSTAASSSQSPGGREDN 237
++ SGPSR + +S+++ S + D TP+E ++A++SS S +
Sbjct: 56 NSPVSGPSRYQVIHSNLLGWLSDSLGNSVAQNPDNTPVEVIPADASASNSSDSGNSSLEG 115
Query: 236 F--TTQLNHMHEMGLLDDAL 183
F NHM ++ + D L
Sbjct: 116 FQWLNTWNHMKQLTNISDGL 135
>12_02_1283 - 27532143-27532517,27532602-27532906,27533053-27533311,
27534412-27534618,27534726-27535181,27535866-27535963,
27536657-27536785,27537371-27537605,27538932-27539039,
27539110-27539160,27539261-27539445,27540207-27540274,
27541535-27541600,27541678-27541730,27542536-27542653,
27542743-27542844,27543525-27543682,27543763-27543840,
27543978-27544069,27544308-27544458
Length = 1097
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -1
Query: 488 VSTPRSGGGSHESLLRLLHA-GDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNR 312
++ +SG G + R H S++ HSS+ PSRS T SE N ++ R
Sbjct: 974 INDMKSGQGQGQRRQRHRHTKASSNKAHSSSYPRVPSRSSNTQRPLLSVQSEGANMTTAR 1033
Query: 311 QS 306
Q+
Sbjct: 1034 QA 1035
>12_01_0471 -
3672309-3672740,3673159-3673251,3673271-3673399,
3673400-3673448,3674291-3674378,3674477-3674573,
3675195-3675278,3675377-3675464,3676589-3676715,
3676774-3676848,3676934-3677042,3677125-3677448,
3677863-3678039
Length = 623
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1
Query: 485 STPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSV 372
STP S G + RLL +G+ +R S +G SR+V
Sbjct: 80 STPSSSSGMRSAAARLLGSGNGNRTLSFVGGNGVSRAV 117
>04_04_1466 -
33799104-33799229,33799659-33799669,33800052-33800200,
33800261-33800299,33800690-33800746,33800839-33801628,
33801705-33801980,33802051-33802117,33802211-33802285,
33802618-33802812,33802927-33803076,33803152-33803522,
33804070-33804193,33804246-33804275,33804306-33804417,
33804919-33804985,33805138-33805180,33805768-33805872
Length = 928
Score = 28.7 bits (61), Expect = 5.5
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = -1
Query: 485 STPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQS 306
S R G HE R S HSS ++ PS T + E+ S + SS+ S
Sbjct: 740 SADRREKGKHEKEDRSRQTTKGSSSHSSRRSRSPSARSRTKK---ESSSHRESVSSDEPS 796
Query: 305 DGTPMEQSTAASSSQSP 255
D + + + SS SP
Sbjct: 797 DNSKRRKLHSCKSSMSP 813
>01_05_0199 -
19174971-19175105,19176302-19176628,19176813-19176915,
19178852-19178916,19179941-19180048,19180213-19180305,
19180395-19180442,19180801-19180899,19180980-19181096,
19181186-19181239,19181312-19181404,19181776-19181881,
19182050-19182084,19182173-19182259,19182385-19182462,
19182528-19182596,19182682-19182780,19183644-19183685,
19184498-19184570,19184654-19184982,19185070-19185127,
19185217-19185269,19186075-19186144,19186276-19186337,
19186452-19186540,19186906-19187011,19187110-19187178,
19187295-19187330
Length = 900
Score = 28.7 bits (61), Expect = 5.5
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Frame = -1
Query: 485 STPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQS 306
S P G SH SS +++ Q GPS +V+TP + +E S A + +R +
Sbjct: 241 SVPPGAGPSHNM------ENTSSSSNTAMQNGGPS-TVVTPVISTEIPSVASDAGISRAN 293
Query: 305 DGTPMEQSTA-----ASSSQSPGGR 246
+ P STA AS+ + GG+
Sbjct: 294 NEYPSLASTADTQNGASAEELEGGQ 318
>12_02_0858 +
23740589-23743233,23743362-23743503,23744778-23744990,
23745083-23745190,23745378-23745587,23745881-23746055,
23746197-23746264
Length = 1186
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = -1
Query: 407 SSTQTSGPSRSVITPEMFSEAI--SEAINRSSNRQSDGTPMEQSTAASSSQSPGGREDNF 234
SS+ T GP R T + ++ S + S S G P Q T SS P G N
Sbjct: 584 SSSTTMGPPRPFNTVSGGASSLLGSPLSSMSGGSSSGGNPDHQGTVLSSIYQPDGYNINS 643
Query: 233 TTQL 222
T L
Sbjct: 644 TLPL 647
>09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539
Length = 1908
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 485 STPRSGG-GSHESLLRLLHAGDSSRPHSSTQTSG 387
STP GG G + RLL GD S P + Q +G
Sbjct: 53 STPTGGGEGRRDGERRLLVYGDGSTPQGALQAAG 86
>02_01_0223 +
1453478-1453750,1455788-1456018,1456066-1456200,
1457918-1457971,1458417-1458482,1458593-1458679,
1459338-1459394,1459470-1459500,1459577-1459634,
1459710-1459761,1459881-1459917,1460008-1460210,
1460556-1460633,1460683-1460853,1461126-1461239
Length = 548
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/76 (26%), Positives = 31/76 (40%)
Frame = -1
Query: 479 PRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDG 300
P G+ E+ A + + + +TSGPS + IT S + SE+ +N Q+D
Sbjct: 291 PMLANGNVETAGTAPGASEINGKNELGRTSGPSANGITSHSESGSESESEGSDANSQNDS 350
Query: 299 TPMEQSTAASSSQSPG 252
E S G
Sbjct: 351 HSKENDVKEDGSSQNG 366
>06_03_0532 -
21844213-21844252,21844579-21844836,21845303-21845568,
21845963-21846369,21846528-21847143
Length = 528
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = -1
Query: 269 SSQSPGGREDNFTTQLNHMHEMGLLDDALNVRALLICSGDVNAAINLVFSGAIG 108
S+ GG+ Q++++HE LD + ++ CS +VN+A+ G +G
Sbjct: 180 SNAGIGGQAFRHGPQISNVHE---LDVVTGMGEMITCSPEVNSALFFAVLGGLG 230
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,104,247
Number of Sequences: 37544
Number of extensions: 355558
Number of successful extensions: 1102
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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