Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_K01
         (832 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69790-4|CAA93655.1|  282|Caenorhabditis elegans Hypothetical pr...    32   0.58 
AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical ...    29   5.4  
AF003385-2|AAB54249.1|  773|Caenorhabditis elegans Hypothetical ...    29   5.4  
Z93377-1|CAB07573.1|  340|Caenorhabditis elegans Hypothetical pr...    28   9.4  

>Z69790-4|CAA93655.1|  282|Caenorhabditis elegans Hypothetical
           protein F33C8.3 protein.
          Length = 282

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = -1

Query: 448 KTYTDSIFERYGAHRSTQFAANHSEESKRSVG----GGDERTGAGR 323
           KTYTD +  R+ A  STQ   N  +  +   G    GG++ TG GR
Sbjct: 153 KTYTDWLSARWDAEPSTQLEVNEEDAGRIEHGIGAFGGNKGTGYGR 198


>AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical
           protein R09A1.1 protein.
          Length = 1121

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 424 ERYGAHRSTQFAANHSEESKRSVGGGDERTGAGRRSA 314
           + YG +R +   AN   ++  + GGG  R G GR +A
Sbjct: 105 DNYGNNRGSHGGANMYSQNGGNRGGGGGRVGGGRTAA 141


>AF003385-2|AAB54249.1|  773|Caenorhabditis elegans Hypothetical
           protein R08F11.7 protein.
          Length = 773

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 355 GGGDERTGAGRRSAEVDGRRSAAAAQPRTG 266
           GGG  R G G RS E DGR+   + + + G
Sbjct: 147 GGGGGRGGDGGRSGEQDGRKKRNSGEQQGG 176


>Z93377-1|CAB07573.1|  340|Caenorhabditis elegans Hypothetical
           protein F13A7.1 protein.
          Length = 340

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = -2

Query: 333 APGGAAQKLMVVGVQPQHNQGQAPVSVVAKPVFARGGG 220
           APG  AQ +   G   Q    Q PVS ++     RGGG
Sbjct: 189 APGSMAQGVGAPGSAAQGGGAQGPVSQISVTQGGRGGG 226


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,271,340
Number of Sequences: 27780
Number of extensions: 244467
Number of successful extensions: 915
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)