Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_J18
(829 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 48 2e-06
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 41 2e-04
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 38 0.002
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 35 0.012
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 35 0.012
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 34 0.021
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 34 0.021
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 33 0.037
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 27 3.2
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 27 4.3
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 25 9.9
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 47.6 bits (108), Expect = 2e-06
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = -3
Query: 491 PESARPHAHR--GATFRXAWPDCEXXXXXSDELSRHKRTHTGEKKFESRVCNLRFMRSDH 318
P R AHR F +PDC + L RH+RTH K F CN F RSD
Sbjct: 11 PLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDV 70
Query: 317 LAKXVKRHAKEK 282
L + V++ +K
Sbjct: 71 LNRHVQQMHLQK 82
Score = 32.7 bits (71), Expect = 0.065
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 535 CSYPGCXXXYXKSSHLKAHARTH 467
C+YP C + + HL+ H RTH
Sbjct: 28 CTYPDCPKSFTRKEHLRRHERTH 50
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 40.7 bits (91), Expect = 2e-04
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 437 PDCEXXXXXSDELSRHKRTHTGEKKFESRV--CNLRFMRSDHLAKXVKRHAKE 285
P C+ + RH R+HTGEK FE C RF R D L + V+ H ++
Sbjct: 7 PFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRK 59
Score = 32.3 bits (70), Expect = 0.086
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -1
Query: 538 ECSYPGCXXXYXKSSHLKAHARTHTGERRSXAXGPIASGXXRAPTSCP 395
ECSYP C + + L H RTH + + +AP S P
Sbjct: 33 ECSYPSCKKRFTRRDELIRHVRTHLRKALVTPEQTLDVNLHKAPDSKP 80
Score = 29.1 bits (62), Expect = 0.80
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -3
Query: 470 AHRGAT-FRXAWPDCEXXXXXSDELSRHKRTH 378
+H G F ++P C+ DEL RH RTH
Sbjct: 25 SHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 538 ECSYPGCXXXYXKSSHLKAHARTHTGER 455
EC P C + + H H R+HTGE+
Sbjct: 5 EC--PFCKRVFHRQEHQVRHIRSHTGEK 30
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 37.5 bits (83), Expect = 0.002
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -1
Query: 535 CSYPGCXXXYXKSSHLKAHARTHT--GERRSXAXGPIASGXXRAPTSCPG 392
C++PGC + +S L HAR HT RR+ A A+ R+ S G
Sbjct: 56 CTFPGCAKRFSRSDELTRHARIHTNANSRRNAAAAAAANNSARSSNSPAG 105
Score = 35.1 bits (77), Expect = 0.012
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -3
Query: 437 PDCEXXXXXSDELSRHKRTHTGEKKFESRV--CNLRFMRSDHLAKXVKRH 294
P C + +RH RTHTGEK C RF RSD L + + H
Sbjct: 29 PLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 526 PGCXXXYXKSSHLKAHARTHTGER 455
P C + + H H RTHTGE+
Sbjct: 29 PLCTKAFYRLEHQTRHIRTHTGEK 52
Score = 25.8 bits (54), Expect = 7.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 440 WPDCEXXXXXSDELSRHKRTHT 375
+P C SDEL+RH R HT
Sbjct: 58 FPGCAKRFSRSDELTRHARIHT 79
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 35.1 bits (77), Expect = 0.012
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -3
Query: 476 PHAHRGATFRXAWPDCEXXXXXSDELSRHKRT-HTGEKKFESRVCNLRFMRSDHLAKXVK 300
P + G +F P+C S+ L RH R+ HT EK F +C RF R D+L + +
Sbjct: 415 PRSPGGKSF--VCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHER 471
Query: 299 RH 294
H
Sbjct: 472 LH 473
Score = 25.8 bits (54), Expect = 7.5
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -1
Query: 526 PGCXXXYXKSSHLKAHART-HTGER 455
P C + +S HL+ H R+ HT E+
Sbjct: 426 PECSKKFKRSEHLRRHIRSLHTSEK 450
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 35.1 bits (77), Expect = 0.012
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = -3
Query: 467 HRGATFRXAWPDCEXXXXXSDE---LSRHKRTHTGEKKFESRV--CNLRFMRSDHLAKXV 303
+R + W DC L H R+HTGEK F V C+ F RSD LAK +
Sbjct: 68 NRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHM 127
Query: 302 K 300
+
Sbjct: 128 R 128
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 34.3 bits (75), Expect = 0.021
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 535 CSYPGCXXXYXKSSHLKAHARTHT 464
C Y GC + + SHLK H R HT
Sbjct: 55 CDYTGCSKAFYRKSHLKIHKRCHT 78
Score = 32.7 bits (71), Expect = 0.065
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = -3
Query: 479 RPHAHRGATFRXAWPDCEXXXXXSDELSRHKRTHTGEKKFESRV--CNLRFMRSDHLAKX 306
R H++ F + C L HKR HT K F C+ +F HL +
Sbjct: 45 RTHSNE-RPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERH 103
Query: 305 VKRHAKEK 282
++ H K K
Sbjct: 104 IEVHRKPK 111
Score = 31.5 bits (68), Expect = 0.15
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 544 VXECSYPGCXXXYXKSSHLKAHARTHTGER 455
+ C Y C Y + S L+ H RTH+ ER
Sbjct: 22 IFHCPYEECGKKYSRPSLLEQHLRTHSNER 51
Score = 25.8 bits (54), Expect = 7.5
Identities = 8/23 (34%), Positives = 10/23 (43%)
Frame = -1
Query: 535 CSYPGCXXXYXKSSHLKAHARTH 467
C Y GC + HL+ H H
Sbjct: 85 CHYDGCDAQFYTQQHLERHIEVH 107
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 34.3 bits (75), Expect = 0.021
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3
Query: 431 CEXXXXXSDELSRHKRTHTGEKKFESRVCNLRFMRSDHLAKXVK 300
C+ + RH++ HTG K F CN RF R D L + K
Sbjct: 605 CKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYK 648
Score = 30.7 bits (66), Expect = 0.26
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 535 CSYPGCXXXYXKSSHLKAHARTHTGER 455
C++ GC + ++ +LK+H THT R
Sbjct: 572 CTFAGCNKRFTRAYNLKSHMNTHTNYR 598
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3
Query: 401 LSRHKRTHTGEKKFESRVCNLRFMRSDHLAKXVKRHAKEKA 279
L H THT + F+ +C F R + + H KA
Sbjct: 587 LKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKA 627
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 33.5 bits (73), Expect = 0.037
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -3
Query: 488 ESARPHAHRGATFRXAWPDCEXXXXXSDELSRHKRTHTGEKKFESRVCNLRFMRSDHLAK 309
+ +R + ++ + C + RH R+HT K F C+ F RSD L +
Sbjct: 5 KKSRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNR 64
Query: 308 XV-KRHAKE 285
V ++H K+
Sbjct: 65 HVNQKHVKQ 73
Score = 29.5 bits (63), Expect = 0.61
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -1
Query: 538 ECSYPGCXXXYXKSSHLKAHARTHTGER 455
+C + GC + + H + H R+HT +
Sbjct: 18 KCDFQGCTKSFTRKEHARRHFRSHTNSK 45
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 27.1 bits (57), Expect = 3.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 520 CXXXYXKSSHLKAHARTHTGER 455
C + + HLK H R+HT E+
Sbjct: 75 CTRAFARLEHLKRHIRSHTNEK 96
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 26.6 bits (56), Expect = 4.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 520 CXXXYXKSSHLKAHARTHTGER 455
C + + S LK H +HTGER
Sbjct: 473 CLQGFSRPSSLKIHTYSHTGER 494
Score = 25.4 bits (53), Expect = 9.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -1
Query: 535 CSYPGCXXXYXKSSHLKAHARTH 467
C Y GC + S+++ H R H
Sbjct: 498 CDYAGCGKAFNVRSNMRRHQRIH 520
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 25.4 bits (53), Expect = 9.9
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = -1
Query: 535 CSYPGCXXXYXKSSHLKAHARTHTGER 455
C Y GC + ++++H +TH +R
Sbjct: 445 CLYNGCNKRIARKYNVESHIQTHLSDR 471
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,977,724
Number of Sequences: 5004
Number of extensions: 25465
Number of successful extensions: 70
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 406444570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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