Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_J11
         (786 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308...    33   0.26 
11_06_0328 - 22395911-22396480                                         31   1.4  
09_06_0249 - 21853325-21853484,21853523-21853902,21854012-21854185     30   1.8  
01_06_0854 - 32477994-32478161,32478689-32478826,32479225-324794...    28   9.7  

>01_01_0409 -
           3084821-3084988,3085069-3085155,3085270-3085476,
           3085904-3085985,3086085-3086275,3086410-3086616,
           3086709-3086871,3087905-3087960,3088035-3088148,
           3088599-3089807
          Length = 827

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +2

Query: 80  SDPXTPCAPXRESILVPCF 136
           S P TPC P +E +LVPCF
Sbjct: 487 STPGTPCPPCQEVVLVPCF 505


>11_06_0328 - 22395911-22396480
          Length = 189

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -3

Query: 679 PTTQDTRSTQTAADRGAVITPSNASFSLCVYELRAAK 569
           PT+ +  +T TAA  GAVIT +  S +  V E  AA+
Sbjct: 11  PTSDEAETTATAAAAGAVITTTGESETTTVAEAAAAE 47


>09_06_0249 - 21853325-21853484,21853523-21853902,21854012-21854185
          Length = 237

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = -1

Query: 645 RRIEVRSLRPRMRLFLYVYMSYGLRSRRFVYETWSRLSIGRHFLSTVVIDATNANHSSFD 466
           RR+E     PR+ L L V +S   R   F+   W    + RH L+    D ++ +    D
Sbjct: 111 RRVESLERGPRLHLSLIVEVSRADRVLGFICSAWHDELVVRHVLTLRDADGSSTSSGGRD 170

Query: 465 F 463
           F
Sbjct: 171 F 171


>01_06_0854 -
           32477994-32478161,32478689-32478826,32479225-32479440,
           32479580-32479656,32481144-32481555,32482248-32482850,
           32482954-32483229
          Length = 629

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 20/55 (36%), Positives = 24/55 (43%)
 Frame = -1

Query: 750 KRTARQWRRHAAARPVPALIGYRDRQLRTRGVLRLRRIEVRSLRPRMRLFLYVYM 586
           KR A Q RR     P P +         T   +RLR I + +LRP   L  YV M
Sbjct: 407 KRGAGQQRRQRRRSPRPRVTAPDGGDTDTDEDIRLRTILLVNLRPTTSLHAYVDM 461


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,055,938
Number of Sequences: 37544
Number of extensions: 342021
Number of successful extensions: 851
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)