Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_J11
         (786 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1625|AAF54898.1|  460|Drosophila melanogaster CG11670-P...    32   0.77 
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    30   4.1  

>AE014297-1625|AAF54898.1|  460|Drosophila melanogaster CG11670-PA
           protein.
          Length = 460

 Score = 32.3 bits (70), Expect = 0.77
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -2

Query: 734 NGAVTQQPGLYPHLSDIETDNSGHEEYSDCGGS 636
           NG     PG YPH++ +   N  HE    CGGS
Sbjct: 144 NGRSIVAPGQYPHMAALGFRNENHEIDYKCGGS 176


>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
           protein.
          Length = 1286

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = -3

Query: 730 APSRSSPACTRTYRI*RPTTQDTRSTQT-AADRGAVITP-SNASFSLCVYELRAAKPS 563
           +P+R++P  T T    RPTT   R T T +  R    TP S    S C       +P+
Sbjct: 314 SPTRTTPRSTTTTSTSRPTTTTPRCTTTPSTSRPTTTTPRSTTKTSTCAPTTTTPRPT 371



 Score = 28.7 bits (61), Expect = 9.5
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -3

Query: 739 TPMAPSRSSPACTRTYRI*RPTTQDTRS-TQTAADRGAVITP 617
           T   P+ ++P CT T     PTT   RS T T   R    TP
Sbjct: 263 TTRRPTTTTPRCTTTTSTCAPTTTTPRSTTTTTTSRPTTTTP 304



 Score = 28.7 bits (61), Expect = 9.5
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 730 APSRSSPACTRTYRI*RPTTQDTRSTQTAADRGAVIT 620
           +P+ ++P  T T    RPTT   RST T +  G   T
Sbjct: 458 SPTTTTPRSTTTTSTSRPTTTTPRSTTTTSTSGPTTT 494


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,660,139
Number of Sequences: 53049
Number of extensions: 603065
Number of successful extensions: 1440
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1435
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)