Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_J09
(787 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00025-2|ABA54414.1| 418|Caenorhabditis elegans Amp-activated k... 29 2.9
U00025-1|ABA54413.1| 589|Caenorhabditis elegans Amp-activated k... 29 2.9
AY347272-1|AAR06927.1| 589|Caenorhabditis elegans AMP-activated... 29 2.9
AC006708-12|AAT81173.1| 908|Caenorhabditis elegans Hypothetical... 29 2.9
AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical... 29 2.9
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 29 5.0
Z50796-1|CAA90668.1| 490|Caenorhabditis elegans Hypothetical pr... 28 6.6
U41017-3|AAC48213.1| 548|Caenorhabditis elegans Hypothetical pr... 28 6.6
U23521-2|AAC46815.2| 316|Caenorhabditis elegans Hypothetical pr... 28 8.7
U23521-1|ABD63220.1| 348|Caenorhabditis elegans Hypothetical pr... 28 8.7
U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical p... 28 8.7
>U00025-2|ABA54414.1| 418|Caenorhabditis elegans Amp-activated
kinase protein 1,isoform b protein.
Length = 418
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = -1
Query: 601 QTFSKSKRENNDKGDIFYASCDEDNDCVTIELPCEEEIPVQTEIDSVKNDSSAITLECDM 422
Q F+ K+ENN + + ED + V V + K+D + + + M
Sbjct: 277 QLFALDKKENNKGYLLDFKGLTEDEEAVPPSRCRSRAASVSVTLAKSKSDLNGNSSKVPM 336
Query: 421 KMLSPMT-LSPKSVEDNLLLSPAHTNLSSDL 332
LSPM+ +SP + + A +L S L
Sbjct: 337 SPLSPMSPISPSVNIPKVRVDDADASLKSSL 367
>U00025-1|ABA54413.1| 589|Caenorhabditis elegans Amp-activated
kinase protein 1,isoform a protein.
Length = 589
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = -1
Query: 601 QTFSKSKRENNDKGDIFYASCDEDNDCVTIELPCEEEIPVQTEIDSVKNDSSAITLECDM 422
Q F+ K+ENN + + ED + V V + K+D + + + M
Sbjct: 448 QLFALDKKENNKGYLLDFKGLTEDEEAVPPSRCRSRAASVSVTLAKSKSDLNGNSSKVPM 507
Query: 421 KMLSPMT-LSPKSVEDNLLLSPAHTNLSSDL 332
LSPM+ +SP + + A +L S L
Sbjct: 508 SPLSPMSPISPSVNIPKVRVDDADASLKSSL 538
>AY347272-1|AAR06927.1| 589|Caenorhabditis elegans AMP-activated
protein kinase alphasubunit 2 protein.
Length = 589
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = -1
Query: 601 QTFSKSKRENNDKGDIFYASCDEDNDCVTIELPCEEEIPVQTEIDSVKNDSSAITLECDM 422
Q F+ K+ENN + + ED + V V + K+D + + + M
Sbjct: 448 QLFALDKKENNKGYLLDFKGLTEDEEAVPPSRCRSRAASVSVTLAKSKSDLNGNSSKVPM 507
Query: 421 KMLSPMT-LSPKSVEDNLLLSPAHTNLSSDL 332
LSPM+ +SP + + A +L S L
Sbjct: 508 SPLSPMSPISPSVNIPKVRVDDADASLKSSL 538
>AC006708-12|AAT81173.1| 908|Caenorhabditis elegans Hypothetical
protein Y110A7A.9b protein.
Length = 908
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 478 TEIDSVKNDSSAITLECDMKMLSPMTLS 395
T I S++ DSS + L+ D+ LSP+ LS
Sbjct: 562 TRIQSIRMDSSKLCLDADLCGLSPLVLS 589
>AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical
protein Y110A7A.9a protein.
Length = 1019
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 478 TEIDSVKNDSSAITLECDMKMLSPMTLS 395
T I S++ DSS + L+ D+ LSP+ LS
Sbjct: 673 TRIQSIRMDSSKLCLDADLCGLSPLVLS 700
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 558 SPLSLFSLFDFEKVCCVCVGMSIRVLCQYPVYVMLDVYYSTSTGFQL 698
S ++L +L++ C+ G SI + ++ D YY T GFQ+
Sbjct: 1268 SIVALMNLYNSSVAICLEAGRSITTILSSLSQLLSDPYYRTCDGFQV 1314
>Z50796-1|CAA90668.1| 490|Caenorhabditis elegans Hypothetical
protein T05A6.4 protein.
Length = 490
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 352 CAPETRANYLPPTSETGSSARASSCRTPT*SLNYRSSPNQSLSEL 486
C PE NY TSET + S C L + S + S+S+L
Sbjct: 38 CEPECTFNYSEVTSETINFLPGSECGIVCGILTFNSRTDLSISQL 82
>U41017-3|AAC48213.1| 548|Caenorhabditis elegans Hypothetical
protein T26C11.4 protein.
Length = 548
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 592 SKSKRENNDKGDIFYASCDEDNDCVTIELPCEEEIPVQTEIDSVKNDSS 446
S+S N+ + + Y SC+E N E E+ I + E DSV +S
Sbjct: 2 SQSTSSNSSQSEFEYLSCEESNVSQNPEEIDEDTIEEKPESDSVTKGNS 50
>U23521-2|AAC46815.2| 316|Caenorhabditis elegans Hypothetical
protein F41C3.8a protein.
Length = 316
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -1
Query: 646 GYWHNTLMLIPTHTQQTFSKSKRENNDKGDIFYASCDEDNDCVTIELPCEEEIPVQTEI 470
G+ ++ + TH+Q S+S+R+++ D++ S D + E+IP Q I
Sbjct: 97 GHLQPSVYMPTTHSQADSSESRRKHDKLSDVYSQSGDTVEFAKNLSDYINEKIPYQISI 155
>U23521-1|ABD63220.1| 348|Caenorhabditis elegans Hypothetical
protein F41C3.8b protein.
Length = 348
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -1
Query: 646 GYWHNTLMLIPTHTQQTFSKSKRENNDKGDIFYASCDEDNDCVTIELPCEEEIPVQTEI 470
G+ ++ + TH+Q S+S+R+++ D++ S D + E+IP Q I
Sbjct: 129 GHLQPSVYMPTTHSQADSSESRRKHDKLSDVYSQSGDTVEFAKNLSDYINEKIPYQISI 187
>U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical
protein F26G1.1 protein.
Length = 1021
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 645 DTGTTLLCSSLHTRSRPSRNQRGRTTIKATYSTQAVTK 532
DT LL L +S +RN+ G+T + A ++ + V K
Sbjct: 307 DTFGKLLYDRLLAKSNEARNKNGQTDLSANFTVEQVPK 344
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,162,148
Number of Sequences: 27780
Number of extensions: 325907
Number of successful extensions: 926
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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