Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_J05
         (783 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0156 + 23160681-23160862,23161090-23161179,23163145-231634...    83   3e-16
06_03_0850 - 25354002-25354391,25354480-25354575,25355352-253556...    79   4e-15

>04_04_0156 +
           23160681-23160862,23161090-23161179,23163145-23163433,
           23164574-23164669,23164755-23165123
          Length = 341

 Score = 82.6 bits (195), Expect = 3e-16
 Identities = 53/160 (33%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
 Frame = -1

Query: 621 YSDPENAEFLSCIRRGEIPSEL--SGQGVSVRVSLEDSRHEECPRHVVKPQAFAGKGHML 448
           Y DP NA+F+  I++ + P EL  + +   V V++   R E+    +  P  F G G  L
Sbjct: 177 YDDPANADFIESIKKSQCPQELEPADRRTPVHVNVI-KRLEDYQAPLRPPSPFQGVGRTL 235

Query: 447 GSXXXXXXXXXXXXXXXQADRAANLRAAQSA-VTLDETQPVTTLQFRLADGTHITGRFNH 271
           G                QA   A     +S  + +D++ P T++Q RLADGT +  RFN 
Sbjct: 236 GGGSSAEES--------QAPAPATQEPRRSVGIVVDDSLPFTSIQLRLADGTRMVARFNM 287

Query: 270 SHTVGALREFVSRAEPAYQLRPFSXLTAFPSAELGDDAAT 151
            HTVG +R F+  + P    RP+   T FP  +L D A T
Sbjct: 288 HHTVGDIRSFIDASRPG-ATRPYQLQTGFPPKQLADPAQT 326


>06_03_0850 -
           25354002-25354391,25354480-25354575,25355352-25355634,
           25357213-25357799
          Length = 451

 Score = 79.0 bits (186), Expect = 4e-15
 Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 1/158 (0%)
 Frame = -1

Query: 621 YSDPENAEFLSCIRRGEIPSELSGQGVSVRVSLEDSRHEE-CPRHVVKPQAFAGKGHMLG 445
           + DP NA FL  I+  E PSEL       +V++   R EE CP  V +   F G    LG
Sbjct: 280 FDDPANASFLKSIKNSECPSELEPADKKSQVNVNLVRKEEKCPEPVKRAAPFHGAAKTLG 339

Query: 444 SXXXXXXXXXXXXXXXQADRAANLRAAQSAVTLDETQPVTTLQFRLADGTHITGRFNHSH 265
           +                A  +    +    +T+D++ P T+LQ R  DG+ +   FN SH
Sbjct: 340 TPSDNNSTPPEATSAAAAASSTETASKTVTITVDDSLPSTSLQIRFVDGSRMVAHFNTSH 399

Query: 264 TVGALREFVSRAEPAYQLRPFSXLTAFPSAELGDDAAT 151
           T+  +R F+    P  +   ++    FP   L D + T
Sbjct: 400 TIADVRAFIDTTRPG-EAGDYTLQAGFPPKPLDDMSKT 436


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,602,159
Number of Sequences: 37544
Number of extensions: 239804
Number of successful extensions: 893
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)