Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_J05
         (783 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024876-10|AAP31418.1|  193|Caenorhabditis elegans Hypothetical...    68   9e-12
AC024876-9|AAF60887.2|  301|Caenorhabditis elegans Hypothetical ...    68   9e-12
AF106583-7|AAD03130.1|  299|Caenorhabditis elegans Hypothetical ...    33   0.23 
U39648-8|AAK39291.1|  270|Caenorhabditis elegans Beta carbonic a...    30   2.1  
U39648-7|AAM15604.1|  429|Caenorhabditis elegans Beta carbonic a...    30   2.1  
AC006794-5|AAK68502.1|  821|Caenorhabditis elegans Hypothetical ...    29   5.0  

>AC024876-10|AAP31418.1|  193|Caenorhabditis elegans Hypothetical
           protein Y94H6A.9b protein.
          Length = 193

 Score = 67.7 bits (158), Expect = 9e-12
 Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 16/171 (9%)
 Frame = -1

Query: 615 DPENAEFLSCIRRGEIPSELSGQGVSVRVSLEDSRHEECPRHVV-KPQAFAGKGHMLGSX 439
           DP   EFL  + +GEIP  L  Q     +  + +RH E   +V  K + F G G  LG+ 
Sbjct: 5   DPRTIEFLESVGKGEIPPSLVQQYPGKEIDFKVNRHHE--EYVAPKMKPFGGSGVRLGNV 62

Query: 438 XXXXXXXXXXXXXXQA---------------DRAANLRAAQSAVTLDETQPVTTLQFRLA 304
                                          + A  L  A+  ++ +  +P T +Q RL 
Sbjct: 63  VPTVLGQSSSSATTAGTSSATTDHNPDHTAENEAKQLEDAKKELSTNMNEPTTNIQIRLP 122

Query: 303 DGTHITGRFNHSHTVGALREFVSRAEPAYQLRPFSXLTAFPSAELGDDAAT 151
           +   + G FNHSHT+ A+R F+  A P     PF  + A+P     D++ T
Sbjct: 123 NNQRLVGIFNHSHTLEAVRTFICTARPDMIYAPFQMMAAYPPKPFEDESQT 173


>AC024876-9|AAF60887.2|  301|Caenorhabditis elegans Hypothetical
           protein Y94H6A.9a protein.
          Length = 301

 Score = 67.7 bits (158), Expect = 9e-12
 Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 16/171 (9%)
 Frame = -1

Query: 615 DPENAEFLSCIRRGEIPSELSGQGVSVRVSLEDSRHEECPRHVV-KPQAFAGKGHMLGSX 439
           DP   EFL  + +GEIP  L  Q     +  + +RH E   +V  K + F G G  LG+ 
Sbjct: 113 DPRTIEFLESVGKGEIPPSLVQQYPGKEIDFKVNRHHE--EYVAPKMKPFGGSGVRLGNV 170

Query: 438 XXXXXXXXXXXXXXQA---------------DRAANLRAAQSAVTLDETQPVTTLQFRLA 304
                                          + A  L  A+  ++ +  +P T +Q RL 
Sbjct: 171 VPTVLGQSSSSATTAGTSSATTDHNPDHTAENEAKQLEDAKKELSTNMNEPTTNIQIRLP 230

Query: 303 DGTHITGRFNHSHTVGALREFVSRAEPAYQLRPFSXLTAFPSAELGDDAAT 151
           +   + G FNHSHT+ A+R F+  A P     PF  + A+P     D++ T
Sbjct: 231 NNQRLVGIFNHSHTLEAVRTFICTARPDMIYAPFQMMAAYPPKPFEDESQT 281


>AF106583-7|AAD03130.1|  299|Caenorhabditis elegans Hypothetical
           protein F23C8.4 protein.
          Length = 299

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = -1

Query: 327 TTLQFRLADGTHITGRFNHSHTVGALREFVSRAEPAYQLRPFSXLTAFP-SAELGDDAAT 151
           TTLQFRL DG  +  +F  +  +  +R +V     A  + PF+ +T FP      DD  T
Sbjct: 223 TTLQFRLLDGQTVRQQFEANEPLAMVRAWV-ETNHANGV-PFTLMTPFPRKVFTEDDMGT 280

Query: 150 P 148
           P
Sbjct: 281 P 281


>U39648-8|AAK39291.1|  270|Caenorhabditis elegans Beta carbonic
           anhydrase protein1, isoform a protein.
          Length = 270

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
 Frame = +2

Query: 548 CPDNSDGISPRRMQLRNSAFSGSLXWRSG-PRXP*SLRGTDTVSPVSLALVVVDSMQTLA 724
           CP N D  SP    +R + F+          R P S++    V+P      ++D M TLA
Sbjct: 120 CPKNFDVTSPMDHWVRRNGFASVKRLNERLHRGPSSMKFESEVAPSQSFDAIIDPMDTLA 179

Query: 725 -RDHLQFVLIYSQL 763
             D L  + +  QL
Sbjct: 180 MEDKLSQINVLQQL 193


>U39648-7|AAM15604.1|  429|Caenorhabditis elegans Beta carbonic
           anhydrase protein1, isoform b protein.
          Length = 429

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
 Frame = +2

Query: 548 CPDNSDGISPRRMQLRNSAFSGSLXWRSG-PRXP*SLRGTDTVSPVSLALVVVDSMQTLA 724
           CP N D  SP    +R + F+          R P S++    V+P      ++D M TLA
Sbjct: 279 CPKNFDVTSPMDHWVRRNGFASVKRLNERLHRGPSSMKFESEVAPSQSFDAIIDPMDTLA 338

Query: 725 -RDHLQFVLIYSQL 763
             D L  + +  QL
Sbjct: 339 MEDKLSQINVLQQL 352


>AC006794-5|AAK68502.1|  821|Caenorhabditis elegans Hypothetical
           protein Y50D4A.1 protein.
          Length = 821

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 618 SDPENAEFLSCIRRGEIPSELSGQGVSVRV 529
           SDPENAEFLS     +   + SG  ++V++
Sbjct: 509 SDPENAEFLSIKEARKTVEDASGCKIAVKI 538


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,227,321
Number of Sequences: 27780
Number of extensions: 169756
Number of successful extensions: 537
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)