Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_J04
(797 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051610-1|AAK93034.1| 396|Drosophila melanogaster GH25564p pro... 212 4e-55
AE014297-1520|AAF54812.1| 396|Drosophila melanogaster CG5641-PA... 212 4e-55
BT022850-1|AAY55266.1| 538|Drosophila melanogaster IP13040p pro... 34 0.26
AE013599-1243|AAF58688.1| 610|Drosophila melanogaster CG13214-P... 34 0.26
DQ138854-1|ABA86460.1| 878|Drosophila melanogaster CG13350 prot... 30 4.2
BT023774-1|AAZ41782.1| 895|Drosophila melanogaster LD47422p pro... 30 4.2
AE014296-2636|AAO41247.1| 884|Drosophila melanogaster CG5215-PB... 30 4.2
AE013599-1810|AAF58306.1| 895|Drosophila melanogaster CG13350-P... 30 4.2
BT011108-1|AAR82775.1| 395|Drosophila melanogaster LD44162p pro... 29 7.4
AF289996-1|AAG02461.1| 1475|Drosophila melanogaster thyroid horm... 29 7.4
AE014296-3591|AAF51757.2| 1475|Drosophila melanogaster CG7162-PA... 29 7.4
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 29 9.7
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 29 9.7
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 29 9.7
BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p pro... 29 9.7
AY069112-1|AAL39257.1| 719|Drosophila melanogaster GH12815p pro... 29 9.7
AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA... 29 9.7
AE014296-1532|AAN11999.1| 719|Drosophila melanogaster CG32026-P... 29 9.7
>AY051610-1|AAK93034.1| 396|Drosophila melanogaster GH25564p
protein.
Length = 396
Score = 212 bits (518), Expect = 4e-55
Identities = 107/217 (49%), Positives = 135/217 (62%)
Frame = -1
Query: 749 HERGFTFTGTSAAVRVLITTLHQNLRKIEPDVHLDYKVISSHLAAIRHSRWFEENAHHSS 570
HERGF A VR+LI TL QNLRK+EP++HLD+K++ SHLAAIRH+RWFEENAHHSS
Sbjct: 167 HERGFDIANVHAKVRILIATLPQNLRKLEPEIHLDHKLMQSHLAAIRHTRWFEENAHHSS 226
Query: 569 IKSIDPSXSGTCVLGTPDSNPLTPWMIDLLAHHCIMNNPQRQALPINVAFRRALSLMAGG 390
IK + +PL+ WM+DL+AH IMNNP RQALPIN+AFRR L++ G
Sbjct: 227 IKVLIRILK-DLTRRFDAFSPLSAWMLDLIAHLAIMNNPSRQALPINLAFRRVFQLLSAG 285
Query: 389 LFLPGCAGLPDPCEAAHSRAHXXXXXXXXXXXXXXXXXXLRVVARGGHLYVLGLQPFEGG 210
LFLPG AG+ DP E H R H LRV+A GG+ ++LGL EG
Sbjct: 286 LFLPGSAGITDPTEPGHIRVHTAMTLEQQDVCCYTSQTLLRVLAHGGYKHILGL---EGN 342
Query: 209 KDISLEITVWDGVVVSPLAPAYNDSPEPMDTDDKEEE 99
+ E++VW+GV +SPL Y + P D EE+
Sbjct: 343 TSVVREMSVWNGVCISPLTAVY-EKPTDKKEGDLEED 378
>AE014297-1520|AAF54812.1| 396|Drosophila melanogaster CG5641-PA
protein.
Length = 396
Score = 212 bits (518), Expect = 4e-55
Identities = 107/217 (49%), Positives = 135/217 (62%)
Frame = -1
Query: 749 HERGFTFTGTSAAVRVLITTLHQNLRKIEPDVHLDYKVISSHLAAIRHSRWFEENAHHSS 570
HERGF A VR+LI TL QNLRK+EP++HLD+K++ SHLAAIRH+RWFEENAHHSS
Sbjct: 167 HERGFDIANVHAKVRILIATLPQNLRKLEPEIHLDHKLMQSHLAAIRHTRWFEENAHHSS 226
Query: 569 IKSIDPSXSGTCVLGTPDSNPLTPWMIDLLAHHCIMNNPQRQALPINVAFRRALSLMAGG 390
IK + +PL+ WM+DL+AH IMNNP RQALPIN+AFRR L++ G
Sbjct: 227 IKVLIRILK-DLTRRFDAFSPLSAWMLDLIAHLAIMNNPSRQALPINLAFRRVFQLLSAG 285
Query: 389 LFLPGCAGLPDPCEAAHSRAHXXXXXXXXXXXXXXXXXXLRVVARGGHLYVLGLQPFEGG 210
LFLPG AG+ DP E H R H LRV+A GG+ ++LGL EG
Sbjct: 286 LFLPGSAGITDPTEPGHIRVHTAMTLEQQDVCCYTSQTLLRVLAHGGYKHILGL---EGN 342
Query: 209 KDISLEITVWDGVVVSPLAPAYNDSPEPMDTDDKEEE 99
+ E++VW+GV +SPL Y + P D EE+
Sbjct: 343 TSVVREMSVWNGVCISPLTAVY-EKPTDKKEGDLEED 378
>BT022850-1|AAY55266.1| 538|Drosophila melanogaster IP13040p
protein.
Length = 538
Score = 33.9 bits (74), Expect = 0.26
Identities = 29/82 (35%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Frame = -3
Query: 399 GGRVVPAGLRGAAGPVRGGA--LPXXXXXXXXXXXXXXXXXTDVASRGGARGSPVRPGSP 226
GG+ G G AG RGGA P RGGA G+P PGSP
Sbjct: 399 GGQGGGGGYGGGAG--RGGAPGAPGSPGGGGFGGQGGGGGFGAGGGRGGAGGAPGGPGSP 456
Query: 225 ALRGRQGHILGDHGVGRRGGLP 160
G G G G G R G P
Sbjct: 457 GGPGYGGGAGGPGGAGGRPGGP 478
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -3
Query: 264 GGARGSPVRPGSPALR--GRQGHILGDHGVGRRGGLPAS 154
GGA G+P PGSP G QG G G G RGG P +
Sbjct: 351 GGAPGAPGAPGSPGGGGFGGQGGGGGFGGGGGRGGAPGA 389
Score = 29.5 bits (63), Expect = 5.6
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3
Query: 267 RGGARGSPVRPGSPALRGRQGHILGDHGVGRRGG 166
RGGA G+P PG G+ G G G G RGG
Sbjct: 317 RGGAPGAPGSPGGGGYGGQGGAGGGYGGGGGRGG 350
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 267 RGGARGSPVRPGSPALRGRQGHILGDHGVGR-RGGLPAS 154
RGGA G+P PG G+ G G +G G RGG P +
Sbjct: 383 RGGAPGAPGSPGGGGFGGQGGG--GGYGGGAGRGGAPGA 419
Score = 28.7 bits (61), Expect = 9.7
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -3
Query: 273 ASRGGARGSPVRPGSPALRGRQGHILGDHGVGRRGG 166
A RGG+ G P PG G QG G +G G GG
Sbjct: 250 AGRGGSPGGPGSPGGGGF-GGQGGAGGGYGGGGGGG 284
>AE013599-1243|AAF58688.1| 610|Drosophila melanogaster CG13214-PA,
isoform A protein.
Length = 610
Score = 33.9 bits (74), Expect = 0.26
Identities = 29/82 (35%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Frame = -3
Query: 399 GGRVVPAGLRGAAGPVRGGA--LPXXXXXXXXXXXXXXXXXTDVASRGGARGSPVRPGSP 226
GG+ G G AG RGGA P RGGA G+P PGSP
Sbjct: 471 GGQGGGGGYGGGAG--RGGAPGAPGSPGGGGFGGQGGGGGFGAGGGRGGAGGAPGGPGSP 528
Query: 225 ALRGRQGHILGDHGVGRRGGLP 160
G G G G G R G P
Sbjct: 529 GGPGYGGGAGGPGGAGGRPGGP 550
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -3
Query: 264 GGARGSPVRPGSPALR--GRQGHILGDHGVGRRGGLPAS 154
GGA G+P PGSP G QG G G G RGG P +
Sbjct: 423 GGAPGAPGAPGSPGGGGFGGQGGGGGFGGGGGRGGAPGA 461
Score = 29.5 bits (63), Expect = 5.6
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3
Query: 267 RGGARGSPVRPGSPALRGRQGHILGDHGVGRRGG 166
RGGA G+P PG G+ G G G G RGG
Sbjct: 389 RGGAPGAPGSPGGGGYGGQGGAGGGYGGGGGRGG 422
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 267 RGGARGSPVRPGSPALRGRQGHILGDHGVGR-RGGLPAS 154
RGGA G+P PG G+ G G +G G RGG P +
Sbjct: 455 RGGAPGAPGSPGGGGFGGQGGG--GGYGGGAGRGGAPGA 491
Score = 28.7 bits (61), Expect = 9.7
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -3
Query: 273 ASRGGARGSPVRPGSPALRGRQGHILGDHGVGRRGG 166
A RGG+ G P PG G QG G +G G GG
Sbjct: 322 AGRGGSPGGPGSPGGGGF-GGQGGAGGGYGGGGGGG 356
>DQ138854-1|ABA86460.1| 878|Drosophila melanogaster CG13350
protein.
Length = 878
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 221 FEGGKDISLEITVWDGVVVSPLAPAYNDSPEPMDTDDKEEESQDS 87
FE G D+ DGV + L + +P+D DD +S DS
Sbjct: 321 FEAGDDVDTAADDGDGVSLEQLKRKVMNFADPVDHDDASNQSLDS 365
>BT023774-1|AAZ41782.1| 895|Drosophila melanogaster LD47422p
protein.
Length = 895
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 221 FEGGKDISLEITVWDGVVVSPLAPAYNDSPEPMDTDDKEEESQDS 87
FE G D+ DGV + L + +P+D DD +S DS
Sbjct: 328 FEAGDDVDTAADDGDGVSLEQLKRKVMNFADPVDHDDASNQSLDS 372
>AE014296-2636|AAO41247.1| 884|Drosophila melanogaster CG5215-PB,
isoform B protein.
Length = 884
Score = 29.9 bits (64), Expect = 4.2
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Frame = -1
Query: 623 LAAIRHSRWFEENAHH-SSIKSIDPSXSGTCVLGTPDSNPLTPWMIDLLAHHCIMNNPQR 447
LA +RH++WF+ A S + C L W ++LL I +
Sbjct: 695 LADLRHAKWFQARATGLQSCVMVIRILRDLC-QRVSSWQSLPQWSLELLVEKVISS---- 749
Query: 446 QALPINV--AFRRALSLMAGGLFLPGCAGLPDPCE 348
PI+ RR + ++ G + G GL DPCE
Sbjct: 750 AGFPISPGDCMRRIMEALSSGFLING-PGLLDPCE 783
>AE013599-1810|AAF58306.1| 895|Drosophila melanogaster CG13350-PA
protein.
Length = 895
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 221 FEGGKDISLEITVWDGVVVSPLAPAYNDSPEPMDTDDKEEESQDS 87
FE G D+ DGV + L + +P+D DD +S DS
Sbjct: 328 FEAGDDVDTAADDGDGVSLEQLKRKVMNFADPVDHDDASNQSLDS 372
>BT011108-1|AAR82775.1| 395|Drosophila melanogaster LD44162p
protein.
Length = 395
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 467 CSGARADLSSTASGGSSPECREHMSRXKTD 556
CSG+ + +SS+AS GSS +E + K D
Sbjct: 81 CSGSGSSMSSSASSGSSDTQKEKKRKKKRD 110
>AF289996-1|AAG02461.1| 1475|Drosophila melanogaster thyroid hormone
receptor-associatedprotein TRAP220 protein.
Length = 1475
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 467 CSGARADLSSTASGGSSPECREHMSRXKTD 556
CSG+ + +SS+AS GSS +E + K D
Sbjct: 766 CSGSGSSMSSSASSGSSDTQKEKKRKKKRD 795
>AE014296-3591|AAF51757.2| 1475|Drosophila melanogaster CG7162-PA
protein.
Length = 1475
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 467 CSGARADLSSTASGGSSPECREHMSRXKTD 556
CSG+ + +SS+AS GSS +E + K D
Sbjct: 766 CSGSGSSMSSSASSGSSDTQKEKKRKKKRD 795
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 28.7 bits (61), Expect = 9.7
Identities = 30/95 (31%), Positives = 35/95 (36%), Gaps = 8/95 (8%)
Frame = -3
Query: 444 GLTHQRGIP--PRVVSDGGRVVPAGLRGAAGPV----RGGA--LPXXXXXXXXXXXXXXX 289
GL Q+G P + + G V G RG GP R G LP
Sbjct: 1407 GLVGQKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGEPGMLPPPGPK 1466
Query: 288 XXTDVASRGGARGSPVRPGSPALRGRQGHILGDHG 184
R G +G P RPG L G QG LG+ G
Sbjct: 1467 GEPGQPGRNGPKGEPGRPGERGLIGIQGE-LGEKG 1500
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 28.7 bits (61), Expect = 9.7
Identities = 30/95 (31%), Positives = 35/95 (36%), Gaps = 8/95 (8%)
Frame = -3
Query: 444 GLTHQRGIP--PRVVSDGGRVVPAGLRGAAGPV----RGGA--LPXXXXXXXXXXXXXXX 289
GL Q+G P + + G V G RG GP R G LP
Sbjct: 1407 GLVGQKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGEPGMLPPPGPK 1466
Query: 288 XXTDVASRGGARGSPVRPGSPALRGRQGHILGDHG 184
R G +G P RPG L G QG LG+ G
Sbjct: 1467 GEPGQPGRNGPKGEPGRPGERGLIGIQGE-LGEKG 1500
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 28.7 bits (61), Expect = 9.7
Identities = 30/95 (31%), Positives = 35/95 (36%), Gaps = 8/95 (8%)
Frame = -3
Query: 444 GLTHQRGIP--PRVVSDGGRVVPAGLRGAAGPV----RGGA--LPXXXXXXXXXXXXXXX 289
GL Q+G P + + G V G RG GP R G LP
Sbjct: 1407 GLVGQKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGEPGMLPPPGPK 1466
Query: 288 XXTDVASRGGARGSPVRPGSPALRGRQGHILGDHG 184
R G +G P RPG L G QG LG+ G
Sbjct: 1467 GEPGQPGRNGPKGEPGRPGERGLIGIQGE-LGEKG 1500
>BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p
protein.
Length = 592
Score = 28.7 bits (61), Expect = 9.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 344 PPRTGPAAPRSPAGTTRP 397
PP TGP P P GTT P
Sbjct: 218 PPGTGPPGPPGPPGTTYP 235
>AY069112-1|AAL39257.1| 719|Drosophila melanogaster GH12815p
protein.
Length = 719
Score = 28.7 bits (61), Expect = 9.7
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 347 PRTGPAAPRSPAGTTRPPS 403
P TGP+ P P+ +RPPS
Sbjct: 262 PPTGPSTPSGPSNPSRPPS 280
>AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA
protein.
Length = 594
Score = 28.7 bits (61), Expect = 9.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 344 PPRTGPAAPRSPAGTTRP 397
PP TGP P P GTT P
Sbjct: 220 PPGTGPPGPPGPPGTTYP 237
>AE014296-1532|AAN11999.1| 719|Drosophila melanogaster CG32026-PA
protein.
Length = 719
Score = 28.7 bits (61), Expect = 9.7
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 347 PRTGPAAPRSPAGTTRPPS 403
P TGP+ P P+ +RPPS
Sbjct: 262 PPTGPSTPSGPSNPSRPPS 280
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,606,598
Number of Sequences: 53049
Number of extensions: 584359
Number of successful extensions: 3170
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3113
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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