Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_J04
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93386-4|CAB07644.1| 370|Caenorhabditis elegans Hypothetical pr... 88 6e-18
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 33 0.18
Z82285-2|CAD56248.1| 622|Caenorhabditis elegans Hypothetical pr... 32 0.55
Z82285-1|CAB05302.1| 634|Caenorhabditis elegans Hypothetical pr... 32 0.55
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 32 0.55
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 32 0.55
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 32 0.55
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 32 0.55
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 32 0.55
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 31 0.96
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 31 0.96
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 31 0.96
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z81050-13|CAB02857.3| 448|Caenorhabditis elegans Hypothetical p... 30 1.7
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 30 1.7
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 30 1.7
U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen prote... 30 1.7
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 30 1.7
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 30 1.7
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 30 1.7
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 2.9
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 2.9
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 29 2.9
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 29 2.9
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 29 3.9
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 29 3.9
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 29 3.9
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 29 3.9
AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen prot... 29 3.9
Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical pr... 29 5.1
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 5.1
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 29 5.1
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 29 5.1
U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protei... 29 5.1
U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protei... 29 5.1
U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protei... 29 5.1
U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protei... 29 5.1
AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical ... 29 5.1
AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen prot... 29 5.1
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 29 5.1
AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen prot... 29 5.1
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 6.7
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 6.7
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 28 6.7
U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protei... 28 6.7
AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein... 28 6.7
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 28 6.7
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 28 8.9
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 28 8.9
U23528-7|AAK31383.2| 254|Caenorhabditis elegans Hypothetical pr... 28 8.9
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 28 8.9
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 28 8.9
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 28 8.9
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 28 8.9
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 8.9
AC024206-4|AAK67240.1| 564|Caenorhabditis elegans Hypothetical ... 28 8.9
AC024206-3|AAF36052.1| 561|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z93386-4|CAB07644.1| 370|Caenorhabditis elegans Hypothetical
protein R11H6.5 protein.
Length = 370
Score = 88.2 bits (209), Expect = 6e-18
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 5/208 (2%)
Frame = -1
Query: 746 ERGFTFTGTSAAVRVLITTLHQNLRKIEPDVHLDYKVISSHLAAIRHSRWFEENAHHSSI 567
E G T + VR+LIT + + K+EP +HLD K + + + RH WF + +
Sbjct: 149 EYGCLITSHNCQVRLLITIIPEESTKLEPLLHLDSKQMMINFFSTRHITWFSQISSELPP 208
Query: 566 KSIDPSXSGTCVLGTP-----DSNPLTPWMIDLLAHHCIMNNPQRQALPINVAFRRALSL 402
I + VL D PL+ W I LA +C+ N P RQ + AFRR +
Sbjct: 209 AFIQEWQALVRVLKDTRSRYSDFQPLSIWTIQYLAFYCLANGPNRQKACLGTAFRRFFEI 268
Query: 401 MAGGLFLPGCAGLPDPCEAAHSRAHXXXXXXXXXXXXXXXXXXLRVVARGGHLYVLGLQP 222
+A G+FLP L DP +A+ R +R+ A G Y L
Sbjct: 269 IAAGIFLPKSPCLIDPV-SANYRIGFDLTLPQMDTVCMGAQTLVRIFATGNDGYRAILGT 327
Query: 221 FEGGKDISLEITVWDGVVVSPLAPAYND 138
D++ I+ W G+ + P AY D
Sbjct: 328 HGTAADLTQTISTWKGIEIRPSIDAYRD 355
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 33.5 bits (73), Expect = 0.18
Identities = 28/94 (29%), Positives = 33/94 (35%)
Frame = -3
Query: 459 QPSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXXT 280
QP ++G G P VV G PAG G AGP P
Sbjct: 217 QPGSNGNAGAPGAPGHVVDVPGTPGPAGPPGPAGPAGAPGQPGQAGHAQPGQPGPQ---- 272
Query: 279 DVASRGGARGSPVRPGSPALRGRQGHILGDHGVG 178
G G+P PG P G+ G+ GD G G
Sbjct: 273 ------GDAGAPGAPGQPGSAGQPGNDGGDGGQG 300
>Z82285-2|CAD56248.1| 622|Caenorhabditis elegans Hypothetical
protein T28F3.1b protein.
Length = 622
Score = 31.9 bits (69), Expect = 0.55
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 552 VXLRDMCSRHSGLE-PPDAVDDRSARAPLHHEQPSASGLTHQRGIPPRVVSDGGR 391
V +R+ + GL PD + + AR L+ +G QRG PR V D R
Sbjct: 522 VTMREFLNNGQGLYLDPDVIQENLAREVLYEVPAQLTGYMKQRGFQPRPVDDPWR 576
>Z82285-1|CAB05302.1| 634|Caenorhabditis elegans Hypothetical
protein T28F3.1a protein.
Length = 634
Score = 31.9 bits (69), Expect = 0.55
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 552 VXLRDMCSRHSGLE-PPDAVDDRSARAPLHHEQPSASGLTHQRGIPPRVVSDGGR 391
V +R+ + GL PD + + AR L+ +G QRG PR V D R
Sbjct: 534 VTMREFLNNGQGLYLDPDVIQENLAREVLYEVPAQLTGYMKQRGFQPRPVDDPWR 588
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 31.9 bits (69), Expect = 0.55
Identities = 26/87 (29%), Positives = 33/87 (37%)
Frame = -3
Query: 420 PPRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXXTDVASRGGARGSPV 241
PP +GGR P G +G + ALP A R G+ G+P
Sbjct: 187 PPGNNGEGGRDGPRGEQGRPA-ISTPALPGDPGAPGEPGPSGLPGDQGQAGRPGSDGAPG 245
Query: 240 RPGSPALRGRQGHILGDHGVGRRGGLP 160
G P G+QGH G G + G P
Sbjct: 246 PQGPPGPPGQQGH-PGQAGPAGQPGQP 271
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 31.9 bits (69), Expect = 0.55
Identities = 27/85 (31%), Positives = 34/85 (40%)
Frame = -3
Query: 459 QPSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXXT 280
QP ++G G P +VV G PAG G+ GP GA P
Sbjct: 219 QPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGP--AGA-PGQPGQAGSSQPGGPGPQG 275
Query: 279 DVASRGGARGSPVRPGSPALRGRQG 205
D A GA G+P + G+P G G
Sbjct: 276 D-AGAPGAPGAPGQAGAPGQDGESG 299
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 31.9 bits (69), Expect = 0.55
Identities = 27/85 (31%), Positives = 34/85 (40%)
Frame = -3
Query: 459 QPSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXXT 280
QP ++G G P +VV G PAG G+ GP GA P
Sbjct: 219 QPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGP--AGA-PGQPGQAGSSQPGGPGPQG 275
Query: 279 DVASRGGARGSPVRPGSPALRGRQG 205
D A GA G+P + G+P G G
Sbjct: 276 D-AGAPGAPGAPGQAGAPGQDGESG 299
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 31.9 bits (69), Expect = 0.55
Identities = 27/85 (31%), Positives = 34/85 (40%)
Frame = -3
Query: 459 QPSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXXT 280
QP ++G G P +VV G PAG G+ GP GA P
Sbjct: 219 QPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGP--AGA-PGQPGQAGSSQPGGPGPQG 275
Query: 279 DVASRGGARGSPVRPGSPALRGRQG 205
D A GA G+P + G+P G G
Sbjct: 276 D-AGAPGAPGAPGQAGAPGQDGESG 299
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 31.9 bits (69), Expect = 0.55
Identities = 27/85 (31%), Positives = 34/85 (40%)
Frame = -3
Query: 459 QPSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXXT 280
QP ++G G P +VV G PAG G+ GP GA P
Sbjct: 219 QPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGP--AGA-PGQPGQAGSSQPGGPGPQG 275
Query: 279 DVASRGGARGSPVRPGSPALRGRQG 205
D A GA G+P + G+P G G
Sbjct: 276 D-AGAPGAPGAPGQAGAPGQDGESG 299
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.72
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = -3
Query: 279 DVASRGGARGSPVRPGSPALRGRQGHILGDHGVGRRG 169
D S+G G+P PG+P RG +GH GD GRRG
Sbjct: 87 DSNSQGCPAGAPGPPGNPGKRGDEGH-PGDE--GRRG 120
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 344 PPRT-GPAAPRSPAGTTRPPSETTR 415
PP T P A R+P TTR P TTR
Sbjct: 309 PPATRAPPATRAPPATTRAPPATTR 333
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +2
Query: 227 GDPGRTGDPRAPPREAT-SVXXXXXXXXXXXXXXXXXXXXPPRTGPAAP--RSPAGTTRP 397
G PG+ G P AP ++A PPR AAP R+P T P
Sbjct: 256 GTPGQAGKPGAPGKDANYCPCPQRQDDRTPPSSGTSAPQPPPRGSTAAPGTRAPPATRAP 315
Query: 398 PS 403
P+
Sbjct: 316 PA 317
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 31.5 bits (68), Expect = 0.72
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 273 ASRGGARGSPVRPGSPALRGRQGHILGDHGVGRRGGLP 160
A + G G+P +PG P GR+GH G G R G P
Sbjct: 194 AGQPGRDGNPGQPGHPGKDGRRGH--GSPGAPGRAGQP 229
>Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical
protein C44C10.1 protein.
Length = 300
Score = 31.5 bits (68), Expect = 0.72
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 261 GARGSPVRPGSPALRGRQGHILGDHGVGRRGGLP 160
G GSP PG+P +G QG + GD+G G P
Sbjct: 238 GPAGSPGAPGNPGSQGSQGPV-GDNGAAGAPGQP 270
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 31.1 bits (67), Expect = 0.96
Identities = 27/103 (26%), Positives = 36/103 (34%), Gaps = 1/103 (0%)
Frame = -3
Query: 459 QPSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXXT 280
QP +G +H + + G PAG+ G GP P
Sbjct: 119 QPGVAGPSHHQK-QECIKCPQGLPGPAGVPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPA 177
Query: 279 DVASRGGARGSPVRPGSPALRGRQGHIL-GDHGVGRRGGLPAS 154
A G G+P PGSP G++G L G G G P +
Sbjct: 178 GSAGSPGQAGAPGNPGSPGKSGQRGRGLPGPSGAPGPQGPPGA 220
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 31.1 bits (67), Expect = 0.96
Identities = 23/86 (26%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Frame = -3
Query: 459 QPSASGLTH--QRGIPPRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXX 286
+P A+G+T G P + G PAG GA GP P
Sbjct: 111 KPGANGVTIGLTGGNGPCITCPAGAPGPAGAPGAPGPQGPSGAPGQDAVGEGPGPAGPQG 170
Query: 285 XTDVASRGGARGSPVRPGSPALRGRQ 208
A G G+P PG+P G++
Sbjct: 171 PAGDAGAPGQAGAPGHPGAPGQGGQR 196
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 31.1 bits (67), Expect = 0.96
Identities = 23/86 (26%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Frame = -3
Query: 459 QPSASGLTH--QRGIPPRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXX 286
+P A+G+T G P + G PAG GA GP P
Sbjct: 111 KPGANGVTIGLTGGNGPCITCPAGAPGPAGAPGAPGPQGPSGAPGQDAVGGGPGPAGPQG 170
Query: 285 XTDVASRGGARGSPVRPGSPALRGRQ 208
A G G+P PG+P G++
Sbjct: 171 PAGDAGAPGQAGAPGHPGAPGQGGQR 196
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 31.1 bits (67), Expect = 0.96
Identities = 27/103 (26%), Positives = 32/103 (31%)
Frame = -3
Query: 459 QPSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXXT 280
QP ++G G G + PAG G GP P
Sbjct: 162 QPGSNGGAGSNGASEGSAG-GCKTCPAGPPGPPGPAGQAGRPGNDGQPGAPSFGGGVGAP 220
Query: 279 DVASRGGARGSPVRPGSPALRGRQGHILGDHGVGRRGGLPASA 151
G GSP +PG+P GR G G R G P A
Sbjct: 221 GAPGPAGDAGSPGQPGAPGQPGRPGK--NAQGGSSRPGPPGPA 261
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 31.1 bits (67), Expect = 0.96
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -3
Query: 270 SRGGARGSPVRPGSPALRGRQGH--ILGDHGVGRRGGLPASAR 148
SRG G P PG P G QGH + G G G R PA+ R
Sbjct: 86 SRGCPAGPPGPPGQPGAPGEQGHPGLAGQPGSGARIN-PATGR 127
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.3
Identities = 27/103 (26%), Positives = 35/103 (33%), Gaps = 1/103 (0%)
Frame = -3
Query: 459 QPSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXXT 280
QP +G +H + + G PAG G GP P
Sbjct: 119 QPGVAGPSHHQK-QECIKCPQGLPGPAGAPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPA 177
Query: 279 DVASRGGARGSPVRPGSPALRGRQGHIL-GDHGVGRRGGLPAS 154
A G G+P PGSP G++G L G G G P +
Sbjct: 178 GSAGSPGQAGAPGNPGSPGKSGQRGRGLPGPSGAPGSQGPPGA 220
>Z81050-13|CAB02857.3| 448|Caenorhabditis elegans Hypothetical
protein C50B6.8 protein.
Length = 448
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 369 RAARQEQPARHQRQRAAECHVDG 437
R AR E PAR + QR +EC + G
Sbjct: 32 RTARSESPARQRHQRPSECSICG 54
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/103 (28%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Frame = -3
Query: 456 PSASGLTHQRGIP--PRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXX 283
P GL +G P P + G GL G G +P
Sbjct: 967 PGLPGLNGPKGEPGVPGMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLPGEKGE 1026
Query: 282 TDVASRGGARGSPVRPGSPALRGRQG--HILGDHGVGRRGGLP 160
A+R G +G PG P LRG QG + G G GLP
Sbjct: 1027 AGPAARDGQKGDAGLPGQPGLRGPQGPSGLPGVPGFKGETGLP 1069
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/103 (28%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Frame = -3
Query: 456 PSASGLTHQRGIP--PRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXX 283
P GL +G P P + G GL G G +P
Sbjct: 966 PGLPGLNGPKGEPGVPGMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLPGEKGE 1025
Query: 282 TDVASRGGARGSPVRPGSPALRGRQG--HILGDHGVGRRGGLP 160
A+R G +G PG P LRG QG + G G GLP
Sbjct: 1026 AGPAARDGQKGDAGLPGQPGLRGPQGPSGLPGVPGFKGETGLP 1068
>U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen protein
113 protein.
Length = 348
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Frame = +2
Query: 227 GDPGRTGDPRAPPRE--ATSVXXXXXXXXXXXXXXXXXXXXPP-RTGPAAPRSPAGTTRP 397
G+PG++G+P AP A V PP TGP+ P P G
Sbjct: 121 GEPGKSGEPGAPGLAGIAPPVTIDPTKGCRVCPNGPRGPTGPPGETGPSGPEGPPGNPGR 180
Query: 398 PSETTRGGMP 427
E R G P
Sbjct: 181 IGEHGREGYP 190
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/103 (28%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Frame = -3
Query: 456 PSASGLTHQRGIP--PRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXX 283
P GL +G P P + G GL G G +P
Sbjct: 966 PGLPGLNGPKGEPGVPGMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLPGEKGE 1025
Query: 282 TDVASRGGARGSPVRPGSPALRGRQG--HILGDHGVGRRGGLP 160
A+R G +G PG P LRG QG + G G GLP
Sbjct: 1026 AGPAARDGQKGDAGLPGQPGLRGPQGPSGLPGVPGFKGETGLP 1068
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/103 (28%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Frame = -3
Query: 456 PSASGLTHQRGIP--PRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXX 283
P GL +G P P + G GL G G +P
Sbjct: 967 PGLPGLNGPKGEPGVPGMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLPGEKGE 1026
Query: 282 TDVASRGGARGSPVRPGSPALRGRQG--HILGDHGVGRRGGLP 160
A+R G +G PG P LRG QG + G G GLP
Sbjct: 1027 AGPAARDGQKGDAGLPGQPGLRGPQGPSGLPGVPGFKGETGLP 1069
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/103 (28%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Frame = -3
Query: 456 PSASGLTHQRGIP--PRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXX 283
P GL +G P P + G GL G G +P
Sbjct: 1003 PGLPGLNGPKGEPGVPGMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLPGEKGE 1062
Query: 282 TDVASRGGARGSPVRPGSPALRGRQG--HILGDHGVGRRGGLP 160
A+R G +G PG P LRG QG + G G GLP
Sbjct: 1063 AGPAARDGQKGDAGLPGQPGLRGPQGPSGLPGVPGFKGETGLP 1105
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 29.9 bits (64), Expect = 2.2
Identities = 27/85 (31%), Positives = 32/85 (37%)
Frame = -3
Query: 459 QPSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXXT 280
QP ++G G P +VV G PAG G GP GA P
Sbjct: 220 QPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGPPGP--AGA-PGQPGQSGSAQPGGPGPQG 276
Query: 279 DVASRGGARGSPVRPGSPALRGRQG 205
D A GA G P + G+P G G
Sbjct: 277 D-AGAPGAPGQPGQAGAPGQDGDSG 300
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 29.9 bits (64), Expect = 2.2
Identities = 27/85 (31%), Positives = 32/85 (37%)
Frame = -3
Query: 459 QPSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXXT 280
QP ++G G P +VV G PAG G GP GA P
Sbjct: 216 QPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGPPGP--AGA-PGQPGQSGSGQPGGPGPQG 272
Query: 279 DVASRGGARGSPVRPGSPALRGRQG 205
D A GA G P + G+P G G
Sbjct: 273 D-AGAPGAPGQPGQAGAPGQDGDSG 296
>Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical
protein B0491.2 protein.
Length = 324
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/68 (27%), Positives = 23/68 (33%), Gaps = 1/68 (1%)
Frame = +2
Query: 227 GDPGRTGDPRAPPREATSVXXXXXXXXXXXXXXXXXXXXP-PRTGPAAPRSPAGTTRPPS 403
G+PGR G P P + +S P R GP PR G T P
Sbjct: 196 GNPGRDGQPGHPGEQGSSGQIGKIGEPGPPGEKGRDAEHPIGRPGPKGPRGDQGPTGPAG 255
Query: 404 ETTRGGMP 427
+ G P
Sbjct: 256 QNGLHGPP 263
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 261 GARGSPVRPGSPALRGRQGHILGDHGVGRRGGLP 160
G GSP +PG P +GR+G G G+ GLP
Sbjct: 886 GFPGSPGQPGYPGQQGREGE-KGYPGIPGENGLP 918
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 261 GARGSPVRPGSPALRGRQGHILGDHGVGRRGGLP 160
G GSP +PG P +GR+G G G+ GLP
Sbjct: 1143 GFPGSPGQPGYPGQQGREGE-KGYPGIPGENGLP 1175
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 261 GARGSPVRPGSPALRGRQGHILGDHGVGRRGGLP 160
G GSP +PG P +GR+G G G+ GLP
Sbjct: 1142 GFPGSPGQPGYPGQQGREGE-KGYPGIPGENGLP 1174
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 344 PPRTGPAAPRSPAGTTRPPSETTRGGMP 427
P R GPA PR GT P + R G P
Sbjct: 195 PGRPGPAGPRGEPGTEYKPGQPGRPGPP 222
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 29.5 bits (63), Expect = 2.9
Identities = 28/93 (30%), Positives = 34/93 (36%)
Frame = -3
Query: 483 ARAPLHHEQPSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXX 304
A +P QP ++G G P +VV G PAG G GP GA P
Sbjct: 246 AGSPGRSGQPGSNGNVGAPGAPGQVVDVPGAPGPAGPPGPPGP--SGA-PGHPGQAGSSL 302
Query: 303 XXXXXXXTDVASRGGARGSPVRPGSPALRGRQG 205
D A G G+P + G P G G
Sbjct: 303 PGAPGPQGD-AGAPGQPGAPGQQGEPGEDGESG 334
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -3
Query: 510 PPDAVDDRSARAPLHHEQPSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGP 355
PP R + P P ++GL Q PP + + G P G RG GP
Sbjct: 216 PPGPPGPRGPKGP-----PGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPGP 262
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -3
Query: 510 PPDAVDDRSARAPLHHEQPSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGP 355
PP R + P P ++GL Q PP + + G P G RG GP
Sbjct: 216 PPGPPGPRGPKGP-----PGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPGP 262
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
protein T23F2.2b protein.
Length = 1538
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -1
Query: 557 DPSXSGTCVLGTPDSNPLTPWMIDLLAHHCIMNNPQRQALPI 432
DP+ +GT V T ++P TP + ++A H +++P +P+
Sbjct: 336 DPNQNGTLVSQTIQADPSTP--LSIIASHPDLHSPSPMMIPL 375
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
protein T23F2.2a protein.
Length = 1534
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -1
Query: 557 DPSXSGTCVLGTPDSNPLTPWMIDLLAHHCIMNNPQRQALPI 432
DP+ +GT V T ++P TP + ++A H +++P +P+
Sbjct: 336 DPNQNGTLVSQTIQADPSTP--LSIIASHPDLHSPSPMMIPL 375
>AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen protein
115 protein.
Length = 393
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 261 GARGSPVRPGSPALRGRQGHILGDHGVGRRGGL 163
G+RG+ PG G QG I G HG+ R GL
Sbjct: 321 GSRGAEGNPGPKGPPGLQGDI-GSHGIAGRPGL 352
>Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical
protein F57B7.3 protein.
Length = 295
Score = 28.7 bits (61), Expect = 5.1
Identities = 27/106 (25%), Positives = 34/106 (32%), Gaps = 4/106 (3%)
Frame = -3
Query: 456 PSASGLTHQRGIPPRVVSDGGRVVP--AGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXX 283
P G Q + + + +P AG G GP P
Sbjct: 110 PGQPGNVGQNAVVASIAASTSECIPCPAGAPGPQGPDGAPGAPGPSGQPGQDGASGQPGA 169
Query: 282 TDVASRGGARGSPVRPGSPALRGRQGHILGDHGVGRRG--GLPASA 151
VA G G+P +PG GR G G G G G G P +A
Sbjct: 170 PGVAGPQGDAGTPGQPGQQGQDGRPGQ-NGRRGRGTPGAPGAPGAA 214
>Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical
protein K12D12.3 protein.
Length = 333
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 264 GGARGSPVRPGSPALRGRQGHILGDHGVGRRG 169
GG G+P G P LRG +G D G+GR G
Sbjct: 174 GGPPGAPGPNGRPGLRGMKG---ADGGLGRTG 202
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/91 (25%), Positives = 28/91 (30%)
Frame = -3
Query: 477 APLHHEQPSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXX 298
AP QP G Q G P S+ G+ P G G GP P
Sbjct: 198 APGGPGQPGRDGQPGQAGQPGSSSSEPGQPGPNGQPGPRGPPGQAGSPGGNGQPGGPGQP 257
Query: 297 XXXXXTDVASRGGARGSPVRPGSPALRGRQG 205
G G+P +PG G +G
Sbjct: 258 GQRGSDGQPGNDGQPGAPGQPGQSGGSGEKG 288
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 261 GARGSPVRPGSPALRGRQGHILGDHGVGRRGGLPAS 154
G GSP PG+P +G QG GD+G G P +
Sbjct: 239 GPAGSPGAPGNPGSQGPQGP-AGDNGGAGSPGQPGA 273
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 261 GARGSPVRPGSPALRGRQGHILGDHGVGRRGGLPAS 154
G GSP PG+P +G QG GD+G G P +
Sbjct: 301 GPAGSPGAPGNPGSQGPQGP-AGDNGGAGSPGQPGA 335
>U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protein
170 protein.
Length = 300
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 261 GARGSPVRPGSPALRGRQGHILGDHGVGRRGGLPAS 154
G GSP PG+P +G QG GD+G G P +
Sbjct: 238 GPAGSPGAPGNPGSQGPQGP-AGDNGGAGSPGQPGA 272
>U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protein
169 protein.
Length = 300
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 261 GARGSPVRPGSPALRGRQGHILGDHGVGRRGGLPAS 154
G GSP PG+P +G QG GD+G G P +
Sbjct: 238 GPAGSPGAPGNPGSQGPQGP-AGDNGGAGSPGQPGA 272
>U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protein
168 protein.
Length = 301
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 261 GARGSPVRPGSPALRGRQGHILGDHGVGRRGGLPAS 154
G GSP PG+P +G QG GD+G G P +
Sbjct: 239 GPAGSPGAPGNPGSQGPQGP-AGDNGGAGSPGQPGA 273
>U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protein
167 protein.
Length = 301
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 261 GARGSPVRPGSPALRGRQGHILGDHGVGRRGGLPAS 154
G GSP PG+P +G QG GD+G G P +
Sbjct: 239 GPAGSPGAPGNPGSQGPQGP-AGDNGGAGSPGQPGA 273
>AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical
protein Y2H9A.3 protein.
Length = 291
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/83 (27%), Positives = 29/83 (34%)
Frame = -3
Query: 450 ASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXXTDVA 271
A G+ + G P + G PAG GA GP P A
Sbjct: 120 AVGIVSEGG--PCIKCPAGEPGPAGEAGAPGPAGPDGQPGQDGQGGQPGPAGPAGP---A 174
Query: 270 SRGGARGSPVRPGSPALRGRQGH 202
GA G+P + G P G+ GH
Sbjct: 175 GDAGAPGAPGQDGQPGAPGQDGH 197
>AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen protein
107, isoform b protein.
Length = 294
Score = 28.7 bits (61), Expect = 5.1
Identities = 31/110 (28%), Positives = 35/110 (31%)
Frame = -3
Query: 534 CSRHSGLEPPDAVDDRSARAPLHHEQPSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGP 355
C + EP A D A AP QP A G Q G P + G AG G AG
Sbjct: 131 CIKCPAGEPGPAGPDGPAGAPGADGQPGAPGNAGQDG-APGAAGEQGDAGAAGQDGEAG- 188
Query: 354 VRGGALPXXXXXXXXXXXXXXXXXTDVASRGGARGSPVRPGSPALRGRQG 205
GG A + GA G PG+ G G
Sbjct: 189 APGGPGKNGQRGSGAPGPAGPEGPAGPAGQDGAPGQDGAPGNAGSEGPAG 238
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -3
Query: 276 VASRGGARGSPVRPGSPALRGRQGHILGDHG 184
VA R GA G P PG P G G LG+ G
Sbjct: 202 VAYRAGAPGPPGEPGPPGAHGDPGD-LGEEG 231
>AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen protein
55 protein.
Length = 208
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 270 SRGGARGSPVRPGSPALRGRQGHI 199
S+G G P PG P +G QGH+
Sbjct: 99 SQGCPAGPPGPPGQPGAQGEQGHV 122
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.2 protein.
Length = 297
Score = 28.3 bits (60), Expect = 6.7
Identities = 31/123 (25%), Positives = 38/123 (30%), Gaps = 2/123 (1%)
Frame = -3
Query: 522 SGLEPPDAVDDRSARAPLH--HEQPSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGPVR 349
SG P D+ AP+ +QP P + GR P G G G
Sbjct: 120 SGSPGPRGQDNHQVHAPIQCPRQQPGCVKCPRGPAGPTGSIGQAGRPGPDGRPGQPGRKG 179
Query: 348 GGALPXXXXXXXXXXXXXXXXXTDVASRGGARGSPVRPGSPALRGRQGHILGDHGVGRRG 169
P A G G P +PG+P GR+G G G R
Sbjct: 180 NNGRPGQPAPQGN------------AGHPGRDGEPGQPGNPGKDGRKGR--GHPGTAGRP 225
Query: 168 GLP 160
G P
Sbjct: 226 GQP 228
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -3
Query: 276 VASRGGARGSPVRPGSPALRGRQGHILGDHGVGRRGGLPAS 154
VA G G+P PG P RG G G G + GLP S
Sbjct: 233 VAGIKGKDGAPGSPGQPGPRGGPGE-PGQDGAPGQPGLPGS 272
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 267 RGGARGSPVRPGSPALRGRQGHIL 196
R G G+P RPG+P GR G +L
Sbjct: 121 RDGRPGAPGRPGNPGPPGRDGALL 144
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -3
Query: 261 GARGSPVRPGSPALRGRQGHILGDHGVGRRG 169
G RGSP G P L+GR+G D GR G
Sbjct: 159 GPRGSPGNNGLPGLKGRRGFDGLDGRPGRPG 189
>U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protein
175 protein.
Length = 287
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 359 PAAPRSPAGTTRPPSETTRGGMP 427
PA PR P G PP GG P
Sbjct: 146 PAGPRGPRGDAGPPGPPGNGGRP 168
>AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein 2
protein.
Length = 298
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 456 PSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGP 355
P G++ +G P R+ G PAG +G GP
Sbjct: 202 PGRQGVSGPKGAPGRINQINGPAGPAGHKGVRGP 235
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -3
Query: 270 SRGGARGSPVRPGSPALRGRQG--HILGDHGVGRRGGLPASAR 148
SRG G P PG P RG G I G G G R PA+ R
Sbjct: 86 SRGCPAGPPGPPGQPGARGEAGLPGIAGQPGSGARIN-PATGR 127
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -3
Query: 264 GGARGSPVRPGSPALRGRQGHILGDHGVGRRG 169
G +G P RPG RG+ GH D G G
Sbjct: 201 GAPQGQPGRPGKVGSRGKAGHTGRDGRPGLEG 232
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 27.9 bits (59), Expect = 8.9
Identities = 26/103 (25%), Positives = 31/103 (30%)
Frame = -3
Query: 456 PSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXXTD 277
P G Q+G P DG P + + GG +
Sbjct: 103 PGPPGEGGQKGNPGHDGDDGKPGAPGVIVAITHDIPGGCIKCPPGRPGPKGPSGLPGSAG 162
Query: 276 VASRGGARGSPVRPGSPALRGRQGHILGDHGVGRRGGLPASAR 148
A G RG P G P +G QG GR G PA R
Sbjct: 163 PAGGNGRRGPPGPVGGPGEQGPQGDAGRPGAAGRPG--PAGPR 203
>U23528-7|AAK31383.2| 254|Caenorhabditis elegans Hypothetical
protein B0034.1 protein.
Length = 254
Score = 27.9 bits (59), Expect = 8.9
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 15/75 (20%)
Frame = +2
Query: 344 PPRTGPAAPRSPAGTTRPP-------SETTRGG--MPR*WVRPDAEGCS*CSG------A 478
PP+ P +P G TRPP SE+ GG PR W P+ E +G
Sbjct: 133 PPQQPPPSPPFSLGVTRPPTLIGTERSESENGGRHRPRPWF-PEGEQIPEVTGEMRPKEG 191
Query: 479 RADLSSTASGGSSPE 523
A +SS++S S E
Sbjct: 192 EAGISSSSSSSSETE 206
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein
36 protein.
Length = 307
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -3
Query: 426 GIPPRVVSDGGRVVPAGLRGAAGPVRGGALP 334
G P RV+ G PAG RG GP LP
Sbjct: 221 GQPGRVIQVNGAAGPAGPRGVKGPPGPKGLP 251
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 27.9 bits (59), Expect = 8.9
Identities = 26/103 (25%), Positives = 31/103 (30%)
Frame = -3
Query: 456 PSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGPVRGGALPXXXXXXXXXXXXXXXXXTD 277
P G Q+G P DG P + + GG +
Sbjct: 97 PGPPGEGGQKGNPGHDGDDGKPGAPGVIVAITHDIPGGCIKCPPGCPGPKGPSGLPGSAG 156
Query: 276 VASRGGARGSPVRPGSPALRGRQGHILGDHGVGRRGGLPASAR 148
A G RG P G P +G QG GR G PA R
Sbjct: 157 PAGGNGRRGPPGPVGGPGEQGPQGDAGRPGAAGRPG--PAGPR 197
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -3
Query: 426 GIPPRVVSDGGRVVPAGLRGAAGPVRGGALP 334
G P RV+ G PAG RG GP LP
Sbjct: 221 GQPGRVIQVNGAAGPAGPRGVKGPPGPKGLP 251
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 27.9 bits (59), Expect = 8.9
Identities = 25/106 (23%), Positives = 32/106 (30%)
Frame = -3
Query: 522 SGLEPPDAVDDRSARAPLHHEQPSASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGPVRGG 343
SG P + R H P +G Q G+ + S G G G GP
Sbjct: 164 SGFGAPGPAGPKGQRGAPGH--PGQAGAPGQPGVDAQSQSTPGA---PGQAGPQGPPGSS 218
Query: 342 ALPXXXXXXXXXXXXXXXXXTDVASRGGARGSPVRPGSPALRGRQG 205
P + + GA G+P PG P G G
Sbjct: 219 GAPGAPGGPGFPGAPGSKGPSGAPGQPGANGNPGAPGQPGQSGGSG 264
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -3
Query: 264 GGARGSPVRPGSPALRGRQGHILGDHGVGRRGGLP 160
GG G P PG G + H HG G R G P
Sbjct: 354 GGRHGPPHCPGRHGRHGSRSHSPRGHGHGGRHGPP 388
>AC024206-4|AAK67240.1| 564|Caenorhabditis elegans Hypothetical
protein Y74C9A.4b protein.
Length = 564
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 143 NDSPEPMDTDDKEEESQ 93
N SPEPM+ DD EE+++
Sbjct: 26 NASPEPMEEDDPEEQAE 42
>AC024206-3|AAF36052.1| 561|Caenorhabditis elegans Hypothetical
protein Y74C9A.4a protein.
Length = 561
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 143 NDSPEPMDTDDKEEESQ 93
N SPEPM+ DD EE+++
Sbjct: 23 NASPEPMEEDDPEEQAE 39
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,605,960
Number of Sequences: 27780
Number of extensions: 264401
Number of successful extensions: 2561
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2352
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -