Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_J03
(789 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 35 0.015
SPBC1734.02c |cdc27|SPBC337.18c|DNA polymerase delta subunit Cdc... 31 0.25
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 31 0.25
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 31 0.25
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 29 0.57
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.76
SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharo... 29 0.76
SPBC30D10.04 |swi3||replication fork protection complex subunit ... 28 1.3
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 28 1.8
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 27 2.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 2.3
SPAC31A2.11c |cuf1||Cu metalloregulatory transcription factor Cu... 27 3.1
SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|... 27 3.1
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 27 4.0
SPAC56F8.12 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.4
SPBC32H8.08c |||mannosyltransferase complex subunit |Schizosacch... 26 5.4
SPMIT.02 |||mitochondrial DNA binding endonuclease|Schizosacchar... 26 7.1
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 26 7.1
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 26 7.1
SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 7.1
SPAC630.12 |||phosphoprotein phosphatase |Schizosaccharomyces po... 26 7.1
SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces p... 25 9.4
SPBC19C7.01 ||SPBC32F12.13c|Mago binding protein homolog|Schizos... 25 9.4
SPBC25D12.05 |trm1||N2,N2-dimethylguanosine tRNA methyltransfera... 25 9.4
>SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 34.7 bits (76), Expect = 0.015
Identities = 32/136 (23%), Positives = 59/136 (43%)
Frame = -1
Query: 579 QESQILKFLETSSEKLFKSNYQRAEDRSIVKFNSKDNNITCQSTNDSEKNTEILIPNHTS 400
+ S +L+ +E K + ++S K S N Q+ ND+ KN + N
Sbjct: 33 ESSLLLEPIEQDQLKDLVEEWMHDSNKSDSKLLS---NQVSQNDNDARKNLRKRLRNDVL 89
Query: 399 KEITDELQKKLSQCDGFSKILFDRTSKEKNVLQEKSIEKEKCISNSKPQTYCEKKVAYEK 220
K++ +E+Q C+ + L++ +K K K++E + + + + KK E
Sbjct: 90 KDLAEEIQ----GCEKKLESLYEEVAKAK----AKAVEDQLALEEADKEA---KKAKTEA 138
Query: 219 SFDDRGKSERDKTKTP 172
+ KS R + KTP
Sbjct: 139 PVEAANKSLRSRKKTP 154
>SPBC1734.02c |cdc27|SPBC337.18c|DNA polymerase delta subunit
Cdc27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 30.7 bits (66), Expect = 0.25
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -1
Query: 525 SNYQRAEDRSIVKFNSKD--NNITCQSTNDSEKNTEILIPNHTSKEITDELQKKLSQ 361
S + + RS K KD +N Q N S KN + + NH KE ++KLS+
Sbjct: 173 STIDKTDTRSTEKTKGKDIFSNARNQKGNSSRKNKKAPLENHKEKEPLLPKEEKLSE 229
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 30.7 bits (66), Expect = 0.25
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Frame = -1
Query: 552 ETSSEKLFKSNYQRAEDRSIVKFNSKDNNITCQSTNDSEKNTEILIPNHTSKEITDELQK 373
E +E++ K+ E++ + FN DN ++ Q+ + E+NT L EI DEL K
Sbjct: 148 ELLTEEMSKTLRALKEEKKMY-FNY-DNFLSSQTVH--EENTAAL-----DSEI-DELMK 197
Query: 372 KLSQCDGFSKILFDRTSKEKNVLQEKSIEKEKCISNSKP-----QTYCEKKVAYEKSFDD 208
++++ + + + D T K + +L+E EKEK + + + KK++ E+ + D
Sbjct: 198 QINEKEEKIEEISDETDKLQKLLRELDEEKEKVYAEEQEFYNNLNQFQIKKLSLERQY-D 256
Query: 207 RGKSERDKTKTPRERLEK 154
E + E+L+K
Sbjct: 257 CANLEFEHNSRKLEKLQK 274
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 30.7 bits (66), Expect = 0.25
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Frame = -1
Query: 462 TCQSTNDSEKNTEILIPNHTSKEITDELQKKLSQCDGFSKILFDRTSKEKN--VLQEKSI 289
T D +++TEI+ + + + K L D F K+ + T+K +N +L ++
Sbjct: 390 TLDEVYDIDRDTEIV----NAGGVNSLVYKHLLNTD-FQKLDLNDTTKNQNDQILPNETS 444
Query: 288 EKEKCISNSKPQTYCEKKVAYEKSFDDRGKSERDKTKTPRER------LEKDKSEHEKSK 127
E + ++ E++ + KS +GK +TP E+ ++DK+E KSK
Sbjct: 445 ESDDDANSISSMENEEERTSDSKSSAKQGKGNGRAKETPEEKRARKKKTKEDKAEKRKSK 504
Query: 126 NHRQE 112
+ E
Sbjct: 505 IPKYE 509
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 29.5 bits (63), Expect = 0.57
Identities = 29/116 (25%), Positives = 53/116 (45%)
Frame = -1
Query: 576 ESQILKFLETSSEKLFKSNYQRAEDRSIVKFNSKDNNITCQSTNDSEKNTEILIPNHTSK 397
E + LK S K+ + E++ + S + I+ + ND+E + L N+ +
Sbjct: 250 EMEALKAKSISDATKHKNEIFQLEEK--LHEASHEAEISIKKLNDAENRIKEL-ENNPTL 306
Query: 396 EITDELQKKLSQCDGFSKILFDRTSKEKNVLQEKSIEKEKCISNSKPQTYCEKKVA 229
EL+K L +++ +SK +++ +E E CI + K +T KKVA
Sbjct: 307 SFNPELEKNLKL---MQELIVAESSKTQHI-----VELESCIDSLKAETERWKKVA 354
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 29.1 bits (62), Expect = 0.76
Identities = 27/138 (19%), Positives = 62/138 (44%)
Frame = -1
Query: 621 RDVMDMILKQIXQHQESQILKFLETSSEKLFKSNYQRAEDRSIVKFNSKDNNITCQSTND 442
+D+ + +LK + +H++S L + KL ++N + +R +F ++ + Q+
Sbjct: 238 KDLENRLLK-VEEHEKS-----LNERATKLSEAN-ENFNNR-FKEFEEREKSAIKQNKEQ 289
Query: 441 SEKNTEILIPNHTSKEITDELQKKLSQCDGFSKILFDRTSKEKNVLQEKSIEKEKCISNS 262
S + ++ H KE+ + L+KK+S K L + + + + E ++ +
Sbjct: 290 SSEGSKTANQTHEQKELINSLEKKVSDI-ALEKQLLEEAVERYKLAMVEFAECQRRLKEL 348
Query: 261 KPQTYCEKKVAYEKSFDD 208
+ + + EK F D
Sbjct: 349 EAMHFEQPGSVTEKLFPD 366
>SPBC947.07 |||ribosome biogenesis protein
Rrp14-C|Schizosaccharomyces pombe|chr 2|||Manual
Length = 233
Score = 29.1 bits (62), Expect = 0.76
Identities = 19/94 (20%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = -1
Query: 399 KEITDELQKKLSQCDGFSKILFD---RTSKEKNVLQEKSIEKEKCISNSKPQTYCEKKVA 229
+ + +E ++K+ + D + ++L + K+ L +KSI +++ + E+K
Sbjct: 134 ESMDEEKRRKIEESDKWHRVLLQAEGKKLKDNEQLLKKSIRRKEKEKKKSSDAWKERKDN 193
Query: 228 YEKSFDDRGKSERDKTKTPRERLEKDKSEHEKSK 127
+K+ R + + K RE + K + K K
Sbjct: 194 EKKAMLMRQQRREENLKKRRESKKSKKGKAPKKK 227
>SPBC30D10.04 |swi3||replication fork protection complex subunit
Swi3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 181
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -1
Query: 282 EKCISNSKPQTYCEKKVAYEKSFDDRGKSERDKTKTPRERLEKDKSEHEKSKN 124
EK + +K + KK EK FD + D K PR+RL K E S+N
Sbjct: 11 EKLVEENKREEV--KKNEEEKEFDLGLEENPDSVKKPRKRLAKFDEERLISEN 61
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 27.9 bits (59), Expect = 1.8
Identities = 22/102 (21%), Positives = 48/102 (47%)
Frame = -1
Query: 417 IPNHTSKEITDELQKKLSQCDGFSKILFDRTSKEKNVLQEKSIEKEKCISNSKPQTYCEK 238
+P EI++ + KK ++ I + +E+ + +EK + ++P +
Sbjct: 460 MPELKDTEISENIFKKFDI--DYATIPYRDQVREQARRRRLEVEKTEPKKLARPAKIKNE 517
Query: 237 KVAYEKSFDDRGKSERDKTKTPRERLEKDKSEHEKSKNHRQE 112
+ +K ++ + R+K K+ +E L+ K +E S N +QE
Sbjct: 518 AWSKQKEVKEKRNTRREKRKSKKEFLKAQK--NEASNNLKQE 557
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 27.5 bits (58), Expect = 2.3
Identities = 21/87 (24%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = -1
Query: 513 RAEDRSIVKFNSKDNNITCQSTNDS--EKNTEILIPNHTSKEITDELQKKLSQCDGFSKI 340
R++ SI+K + ++ T Q N+S ++T++ TS + DE +KK+S + +++
Sbjct: 179 RSQLHSIIKLPDRSSSFTLQCINESVRPQSTKVKEEATTSSKGKDE-EKKVSTVEQRTQL 237
Query: 339 -LFDRTSKEKNVLQEKSIEKEKCISNS 262
R ++N L E + K + ++
Sbjct: 238 QQLSRLQDQQNGLMESRSQSLKILDSN 264
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = -1
Query: 297 KSIEKEKCISNSKPQTYCEKKVAYEKSFDDRGKSERDKTKTPRERLEKDKSEHEKSKNHR 118
K ++ + ++ K + E+K +K D G S +E+ +K EH K +
Sbjct: 694 KDLDYVELMTGKKVYSRTERKKDTQKQSHDHGHSHSKSHDREKEKEKKKDREHRKHRETE 753
Query: 117 QE 112
+E
Sbjct: 754 EE 755
>SPAC31A2.11c |cuf1||Cu metalloregulatory transcription factor Cuf1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/63 (26%), Positives = 26/63 (41%)
Frame = -1
Query: 417 IPNHTSKEITDELQKKLSQCDGFSKILFDRTSKEKNVLQEKSIEKEKCISNSKPQTYCEK 238
I H + T +KK S+C S D +S + S EK + +T+C K
Sbjct: 51 ITRHLHVKCTCNSRKKGSKCSTSSTTDLDSSSASNSSCSIPSSISEKLLPRDNVKTHCPK 110
Query: 237 KVA 229
+ A
Sbjct: 111 RSA 113
>SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 714
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -1
Query: 321 KEKNVLQEKSIEKEKCISNSKPQTYCEKKVAYEKSFDDRGKSERDKTKTPRERLEKDKSE 142
+ KN++ ++++ +S+SKP V E DD G + +K + LEK S
Sbjct: 283 ERKNLISLPLLKQDDWLSSSKPFGSSTPNVVIEFDSDDDG-DDFSNSKIEQSNLEKPPSN 341
Query: 141 HE 136
E
Sbjct: 342 SE 343
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 26.6 bits (56), Expect = 4.0
Identities = 20/110 (18%), Positives = 44/110 (40%)
Frame = -1
Query: 579 QESQILKFLETSSEKLFKSNYQRAEDRSIVKFNSKDNNITCQSTNDSEKNTEILIPNHTS 400
+E+ + + +S E+ KS + R+ + +++ I + E+ E +PN+ S
Sbjct: 320 KENTVQQEASSSEEEAVKSLPET--QRTTSRIETQEEEIKEEEMEGEEEEEEEEVPNYES 377
Query: 399 KEITDELQKKLSQCDGFSKILFDRTSKEKNVLQEKSIEKEKCISNSKPQT 250
+ ++ LS G + D +E+N L + + T
Sbjct: 378 ENELEDKVGDLSLSLGVASSFVDEMLRERNNLSAEGTSASPSLDKKSEST 427
>SPAC56F8.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +3
Query: 18 VFHDLSQLFFLIYRNSFYLGVHLWTFYLYHVFPVYDFWTSHAQTYLFLNAL*GFLFCLVH 197
++H +S F +YR +G H F L H V ++ +A ++ L GF +H
Sbjct: 149 IWHVISTYGFALYRQRIVVGKHAAHFSLDHWIFVVEY---YAPIVFYVFNLMGFFLAALH 205
>SPBC32H8.08c |||mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = +3
Query: 12 FFVFHDLSQLFFLIYRNSFYLGVHLW--TFYLY 104
F +FHD F + LG H W T++LY
Sbjct: 37 FLLFHDFGTALFTSLVKASMLGFHNWRRTYWLY 69
>SPMIT.02 |||mitochondrial DNA binding
endonuclease|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 384
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 42 FFLIYRNSFYLGVHLWTFYLYHVF 113
FFL+YR ++ GV L +L++ F
Sbjct: 61 FFLVYRTTYSFGVCLMKRFLFNKF 84
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 25.8 bits (54), Expect = 7.1
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Frame = -1
Query: 465 ITCQSTNDSEKNTEILIPNHTSKEITDELQKKLSQCDGFSKILFDRTSKEKNVLQEKSIE 286
I Q S+K E+L +E ELQ K++ K L + K+K LQ+K +
Sbjct: 14 IPTQQKRKSKKMEELL---SKQREECKELQSKITN---LRKQLKEGNKKQKRALQQKISQ 67
Query: 285 KEKCISNSKPQTYCEKKVAYEKSFDDRGKSER-DKTKTPRERLEKDK-SEHEKS 130
E +S Q + ++ +K ++ ++++ D T +++E K + EKS
Sbjct: 68 MEADLS----QKHATERQKLDKGDEETNETQQEDLLNTLLQQMEDTKITTAEKS 117
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = -1
Query: 687 DISDIKLPDDPPPSTFSEDNTARDVMDMILKQIXQHQESQIL 562
D+SD LP++ ++ D D ++ K++ + Q+L
Sbjct: 96 DVSDDNLPEEEQAVNYTGDKDDEDFGKLLAKEMGEEAAGQVL 137
>SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 646
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 357 DGFSKILFDRTSKEKNVL 304
+GFSK+LF + S EK VL
Sbjct: 127 NGFSKLLFSQYSDEKKVL 144
>SPAC630.12 |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 422
Score = 25.8 bits (54), Expect = 7.1
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 392 ISLLVWLGINISVFFSLSFVD*QVILLSLLLNFTMDRSS 508
I + VW G +IS+FF+L ++L + + F DR S
Sbjct: 340 IQIYVWYGASISIFFAL------ILLRTAIFFFGTDRYS 372
>SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 25.4 bits (53), Expect = 9.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 240 KKVAYEKSFDDRGKSERDKTKTPRERLEKDKSEHEKSK 127
KKV K+ + S+R+K+K +E+ EK +KSK
Sbjct: 126 KKVKVRKT-SGKESSKREKSKKKKEKKEKKDKLKKKSK 162
>SPBC19C7.01 ||SPBC32F12.13c|Mago binding protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 196
Score = 25.4 bits (53), Expect = 9.4
Identities = 19/84 (22%), Positives = 36/84 (42%)
Frame = -1
Query: 726 SIEKESFSLCANVDISDIKLPDDPPPSTFSEDNTARDVMDMILKQIXQHQESQILKFLET 547
S+EK+ L + D S K D PP S ++ R + + K+ H+ + ++
Sbjct: 57 SLEKQMKKLQLSNDASTSKSIDRPPISELEKEKLERPLSNK-KKEKNDHKAESLKHDYDS 115
Query: 546 SSEKLFKSNYQRAEDRSIVKFNSK 475
EK + + D++ +SK
Sbjct: 116 VGEKRISKDSVKHLDKTYSSIDSK 139
>SPBC25D12.05 |trm1||N2,N2-dimethylguanosine tRNA
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 548
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 552 ETSSEKLFKSNYQRAEDRSIVKFNSKDNNITCQSTNDSEKN 430
ET S+K+ ++ R + S++N C +T+D EKN
Sbjct: 69 ETRSKKIVAKSHHRHQLLDQNSELSQENLTKCDTTHDFEKN 109
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,676,162
Number of Sequences: 5004
Number of extensions: 54731
Number of successful extensions: 263
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 262
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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