Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_I19
         (799 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC085196-1|AAH85196.1|  257|Homo sapiens MAPK13 protein protein.       30   8.4  
AB209586-1|BAD92823.1|  255|Homo sapiens mitogen-activated prote...    30   8.4  

>BC085196-1|AAH85196.1|  257|Homo sapiens MAPK13 protein protein.
          Length = 257

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = +3

Query: 192 PAPKIGPQSGW*QSAKGFLSSGCRAGGSDSANRKARSATT*PPXPXGPHPXL 347
           P P   PQ G+  +       GC   G D+  R+ ++    P    GPHP L
Sbjct: 209 PVPATDPQEGFHSAVPTGQPPGCGPAGEDAGARRGQA----PDGRAGPHPSL 256


>AB209586-1|BAD92823.1|  255|Homo sapiens mitogen-activated protein
           kinase 13 variant protein.
          Length = 255

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = +3

Query: 192 PAPKIGPQSGW*QSAKGFLSSGCRAGGSDSANRKARSATT*PPXPXGPHPXL 347
           P P   PQ G+  +       GC   G D+  R+ ++    P    GPHP L
Sbjct: 207 PVPATDPQEGFHSAVPTGQPPGCGPAGEDAGARRGQA----PDGRAGPHPSL 254


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,267,668
Number of Sequences: 237096
Number of extensions: 596662
Number of successful extensions: 2167
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2157
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)