Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_I18
(795 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternati... 44 8e-04
M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein. 44 8e-04
BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor, argini... 44 8e-04
AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein. 44 8e-04
M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternati... 42 0.002
BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein. 42 0.002
AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor, argini... 42 0.002
U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c pr... 41 0.004
U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein. 41 0.004
BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor, argini... 41 0.004
BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor, argini... 41 0.004
AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor, argini... 41 0.004
U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein. 40 0.008
U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protei... 40 0.008
BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein. 40 0.008
AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,... 40 0.008
AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,... 40 0.008
AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,... 40 0.008
AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,... 40 0.008
AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,... 40 0.008
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 33 0.90
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 33 0.90
CR456559-1|CAG30445.1| 376|Homo sapiens RBM9 protein. 33 0.90
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 33 0.90
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 33 0.90
BC025281-1|AAH25281.1| 380|Homo sapiens RNA binding motif prote... 33 0.90
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 33 0.90
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 33 0.90
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 33 0.90
AY072786-1|AAL67150.1| 390|Homo sapiens RNA binding motif prote... 33 0.90
AM419009-1|CAL91352.1| 398|Homo sapiens RNA binding motif prote... 33 0.90
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 33 0.90
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 33 0.90
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 33 0.90
AK055213-1|BAB70875.1| 450|Homo sapiens mRNA. protein. 33 0.90
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 33 0.90
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 33 0.90
AF229058-1|AAL71905.1| 380|Homo sapiens hexaribonucleotide bind... 33 0.90
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 33 0.90
AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein. 33 0.90
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 33 0.90
DQ778625-1|ABG77459.1| 451|Homo sapiens unknown protein. 33 1.2
AL079295-2|CAI19059.1| 367|Homo sapiens RNA binding motif prote... 33 1.2
AL049748-3|CAI20525.1| 367|Homo sapiens RNA binding motif prote... 33 1.2
AL009266-1|CAA15842.1| 367|Homo sapiens hypothetical protein pr... 33 1.2
BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protei... 32 2.1
AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens ... 32 2.1
AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protei... 32 2.1
AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide bind... 32 2.1
AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide bind... 32 2.1
AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide bind... 32 2.1
AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide bind... 32 2.1
AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide bind... 32 2.1
AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protei... 32 2.1
AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide bind... 32 2.1
AY960684-1|AAX84843.1| 370|Homo sapiens RNA binding motif prote... 32 2.7
U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein. 31 3.6
BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor, argini... 31 3.6
BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor, argini... 31 3.6
BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor, argini... 31 3.6
AK093052-1|BAC04036.1| 279|Homo sapiens protein ( Homo sapiens ... 31 4.8
BC117321-1|AAI17322.1| 1486|Homo sapiens RAPGEF2 protein protein. 30 8.4
AC074344-1|AAY40909.1| 1479|Homo sapiens unknown protein. 30 8.4
AB002311-1|BAA20772.2| 1508|Homo sapiens KIAA0313 protein. 30 8.4
>M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 248
Score = 43.6 bits (98), Expect = 8e-04
Identities = 25/74 (33%), Positives = 35/74 (47%)
Frame = -2
Query: 368 TKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
+++S + VV S PPS Q L + MRE G+V + DV G +V F D V+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKL 175
Query: 188 DGSKVDGQTIEVKY 147
D +K E Y
Sbjct: 176 DNTKFRSHEGETAY 189
>M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein.
Length = 248
Score = 43.6 bits (98), Expect = 8e-04
Identities = 25/74 (33%), Positives = 35/74 (47%)
Frame = -2
Query: 368 TKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
+++S + VV S PPS Q L + MRE G+V + DV G +V F D V+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKL 175
Query: 188 DGSKVDGQTIEVKY 147
D +K E Y
Sbjct: 176 DNTKFRSHEGETAY 189
>BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 248
Score = 43.6 bits (98), Expect = 8e-04
Identities = 25/74 (33%), Positives = 35/74 (47%)
Frame = -2
Query: 368 TKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
+++S + VV S PPS Q L + MRE G+V + DV G +V F D V+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKL 175
Query: 188 DGSKVDGQTIEVKY 147
D +K E Y
Sbjct: 176 DNTKFRSHEGETAY 189
>AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein.
Length = 248
Score = 43.6 bits (98), Expect = 8e-04
Identities = 25/74 (33%), Positives = 35/74 (47%)
Frame = -2
Query: 368 TKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
+++S + VV S PPS Q L + MRE G+V + DV G +V F D V+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKL 175
Query: 188 DGSKVDGQTIEVKY 147
D +K E Y
Sbjct: 176 DNTKFRSHEGETAY 189
>M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 292
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = -2
Query: 368 TKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
+++S + VV S PPS Q L + MRE G+V + DV G +V F D V+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKL 175
Query: 188 DGSK 177
D +K
Sbjct: 176 DNTK 179
>BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein.
Length = 201
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = -2
Query: 368 TKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
+++S + VV S PPS Q L + MRE G+V + DV G +V F D V+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKL 175
Query: 188 DGSK 177
D +K
Sbjct: 176 DNTK 179
>AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 233
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = -2
Query: 368 TKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
+++S + VV S PPS Q L + MRE G+V + DV G +V F D V+
Sbjct: 148 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKL 207
Query: 188 DGSK 177
D +K
Sbjct: 208 DNTK 211
>U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c
protein.
Length = 221
Score = 41.1 bits (92), Expect = 0.004
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = -2
Query: 368 TKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
T++S V+ S PPS Q L + MRE G+V + DV G +V + D E ++
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKL 165
Query: 188 DGSKVDGQTIEVKY 147
D +K E Y
Sbjct: 166 DDTKFRSHEGETSY 179
>U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein.
Length = 221
Score = 41.1 bits (92), Expect = 0.004
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = -2
Query: 368 TKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
T++S V+ S PPS Q L + MRE G+V + DV G +V + D E ++
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKL 165
Query: 188 DGSKVDGQTIEVKY 147
D +K E Y
Sbjct: 166 DDTKFRSHEGETSY 179
>BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 41.1 bits (92), Expect = 0.004
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = -2
Query: 368 TKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
T++S V+ S PPS Q L + MRE G+V + DV G +V + D E ++
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKL 165
Query: 188 DGSKVDGQTIEVKY 147
D +K E Y
Sbjct: 166 DDTKFRSHEGETSY 179
>BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 41.1 bits (92), Expect = 0.004
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = -2
Query: 368 TKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
T++S V+ S PPS Q L + MRE G+V + DV G +V + D E ++
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKL 165
Query: 188 DGSKVDGQTIEVKY 147
D +K E Y
Sbjct: 166 DDTKFRSHEGETSY 179
>AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 41.1 bits (92), Expect = 0.004
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = -2
Query: 368 TKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
T++S V+ S PPS Q L + MRE G+V + DV G +V + D E ++
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKL 165
Query: 188 DGSKVDGQTIEVKY 147
D +K E Y
Sbjct: 166 DDTKFRSHEGETSY 179
>U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein.
Length = 346
Score = 40.3 bits (90), Expect = 0.008
Identities = 21/99 (21%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Frame = -2
Query: 380 ESDNTKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFN 222
+S NT+ S + ++ +Y P ++ + L + +GE++ ++ +G V++ +
Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89
Query: 221 VRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR*Y 105
+DAE+ + +G ++ +TI+V Y ++ D Y
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLY 128
>U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protein 1
protein.
Length = 359
Score = 40.3 bits (90), Expect = 0.008
Identities = 21/99 (21%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Frame = -2
Query: 380 ESDNTKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFN 222
+S NT+ S + ++ +Y P ++ + L + +GE++ ++ +G V++ +
Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89
Query: 221 VRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR*Y 105
+DAE+ + +G ++ +TI+V Y ++ D Y
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLY 128
>BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein.
Length = 346
Score = 40.3 bits (90), Expect = 0.008
Identities = 21/99 (21%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Frame = -2
Query: 380 ESDNTKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFN 222
+S NT+ S + ++ +Y P ++ + L + +GE++ ++ +G V++ +
Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89
Query: 221 VRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR*Y 105
+DAE+ + +G ++ +TI+V Y ++ D Y
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLY 128
>AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 387
Score = 40.3 bits (90), Expect = 0.008
Identities = 21/99 (21%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Frame = -2
Query: 380 ESDNTKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFN 222
+S NT+ S + ++ +Y P ++ + L + +GE++ ++ +G V++ +
Sbjct: 58 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 117
Query: 221 VRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR*Y 105
+DAE+ + +G ++ +TI+V Y ++ D Y
Sbjct: 118 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLY 156
>AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 189
Score = 40.3 bits (90), Expect = 0.008
Identities = 21/99 (21%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Frame = -2
Query: 380 ESDNTKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFN 222
+S NT+ S + ++ +Y P ++ + L + +GE++ ++ +G V++ +
Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89
Query: 221 VRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR*Y 105
+DAE+ + +G ++ +TI+V Y ++ D Y
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLY 128
>AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 359
Score = 40.3 bits (90), Expect = 0.008
Identities = 21/99 (21%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Frame = -2
Query: 380 ESDNTKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFN 222
+S NT+ S + ++ +Y P ++ + L + +GE++ ++ +G V++ +
Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89
Query: 221 VRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR*Y 105
+DAE+ + +G ++ +TI+V Y ++ D Y
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLY 128
>AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 346
Score = 40.3 bits (90), Expect = 0.008
Identities = 21/99 (21%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Frame = -2
Query: 380 ESDNTKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFN 222
+S NT+ S + ++ +Y P ++ + L + +GE++ ++ +G V++ +
Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89
Query: 221 VRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR*Y 105
+DAE+ + +G ++ +TI+V Y ++ D Y
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLY 128
>AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B) vari
protein.
Length = 367
Score = 40.3 bits (90), Expect = 0.008
Identities = 21/99 (21%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Frame = -2
Query: 380 ESDNTKQSTSMVVFSYPPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFN 222
+S NT+ S + ++ +Y P ++ + L + +GE++ ++ +G V++ +
Sbjct: 38 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 97
Query: 221 VRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR*Y 105
+DAE+ + +G ++ +TI+V Y ++ D Y
Sbjct: 98 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLY 136
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.90
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 257 LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTI 159
L G A V F N +AE+ +K DG ++DGQ I
Sbjct: 201 LSKGYAYVEFENPDEAEKALKHMDGGQIDGQEI 233
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 33.5 bits (73), Expect = 0.90
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -2
Query: 311 QALSNKMREVGEVKFVDVLGMGR---AIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
Q L + MR+ GEV + D GR ++ F + D +R ++ DG++V+G+ I +
Sbjct: 118 QDLKDYMRQAGEVTYADA-HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
>CR456559-1|CAG30445.1| 376|Homo sapiens RBM9 protein.
Length = 376
Score = 33.5 bits (73), Expect = 0.90
Identities = 35/168 (20%), Positives = 67/168 (39%), Gaps = 2/168 (1%)
Frame = -2
Query: 650 MVQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDT 471
MVQPFT F PQ T+ ++ + T A
Sbjct: 21 MVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQN 80
Query: 470 SALDGNYSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYPPPSVDLQALSNKM 291
+L Q + ++++ +++S +S + S + F + P DL+ + +
Sbjct: 81 GSLTTEGGAQTDGQQSQTQSSENSES----KSTPKRLHVSNIPFRFRDP--DLRQMFGQF 134
Query: 290 REVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 135 GKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 182
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.5 bits (73), Expect = 0.90
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -2
Query: 311 QALSNKMREVGEVKFVDVLGMGR---AIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
Q L + MR+ GEV + D GR ++ F + D +R ++ DG++V+G+ I +
Sbjct: 118 QDLKDYMRQAGEVTYADA-HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.90
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 257 LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTI 159
L G A V F N +AE+ +K DG ++DGQ I
Sbjct: 201 LSKGYAYVEFENPDEAEKALKHMDGGQIDGQEI 233
>BC025281-1|AAH25281.1| 380|Homo sapiens RNA binding motif protein
9 protein.
Length = 380
Score = 33.5 bits (73), Expect = 0.90
Identities = 35/168 (20%), Positives = 67/168 (39%), Gaps = 2/168 (1%)
Frame = -2
Query: 650 MVQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDT 471
MVQPFT F PQ T+ ++ + T A
Sbjct: 21 MVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQN 80
Query: 470 SALDGNYSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYPPPSVDLQALSNKM 291
+L Q + ++++ +++S +S + S + F + P DL+ + +
Sbjct: 81 GSLTTEGGAQTDGQQSQTQSSENSES----KSTPKRLHVSNIPFRFRDP--DLRQMFGQF 134
Query: 290 REVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 135 GKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 182
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.5 bits (73), Expect = 0.90
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -2
Query: 311 QALSNKMREVGEVKFVDVLGMGR---AIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
Q L + MR+ GEV + D GR ++ F + D +R ++ DG++V+G+ I +
Sbjct: 118 QDLKDYMRQAGEVTYADA-HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.90
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 257 LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTI 159
L G A V F N +AE+ +K DG ++DGQ I
Sbjct: 201 LSKGYAYVEFENPDEAEKALKHMDGGQIDGQEI 233
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.90
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 257 LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTI 159
L G A V F N +AE+ +K DG ++DGQ I
Sbjct: 201 LSKGYAYVEFENPDEAEKALKHMDGGQIDGQEI 233
>AY072786-1|AAL67150.1| 390|Homo sapiens RNA binding motif protein
9 protein.
Length = 390
Score = 33.5 bits (73), Expect = 0.90
Identities = 35/168 (20%), Positives = 67/168 (39%), Gaps = 2/168 (1%)
Frame = -2
Query: 650 MVQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDT 471
MVQPFT F PQ T+ ++ + T A
Sbjct: 31 MVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQN 90
Query: 470 SALDGNYSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYPPPSVDLQALSNKM 291
+L Q + ++++ +++S +S + S + F + P DL+ + +
Sbjct: 91 GSLTTEGGAQTDGQQSQTQSSENSES----KSTPKRLHVSNIPFRFRDP--DLRQMFGQF 144
Query: 290 REVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 145 GKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 192
>AM419009-1|CAL91352.1| 398|Homo sapiens RNA binding motif protein
9 protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.90
Identities = 35/168 (20%), Positives = 67/168 (39%), Gaps = 2/168 (1%)
Frame = -2
Query: 650 MVQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDT 471
MVQPFT F PQ T+ ++ + T A
Sbjct: 29 MVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQN 88
Query: 470 SALDGNYSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYPPPSVDLQALSNKM 291
+L Q + ++++ +++S +S + S + F + P DL+ + +
Sbjct: 89 GSLTTEGGAQTDGQQSQTQSSENSES----KSTPKRLHVSNIPFRFRDP--DLRQMFGQF 142
Query: 290 REVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 143 GKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 190
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.5 bits (73), Expect = 0.90
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -2
Query: 311 QALSNKMREVGEVKFVDVLGMGR---AIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
Q L + MR+ GEV + D GR ++ F + D +R ++ DG++V+G+ I +
Sbjct: 118 QDLKDYMRQAGEVTYADA-HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.5 bits (73), Expect = 0.90
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -2
Query: 311 QALSNKMREVGEVKFVDVLGMGR---AIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
Q L + MR+ GEV + D GR ++ F + D +R ++ DG++V+G+ I +
Sbjct: 118 QDLKDYMRQAGEVTYADA-HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 33.5 bits (73), Expect = 0.90
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -2
Query: 311 QALSNKMREVGEVKFVDVLGMGR---AIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
Q L + MR+ GEV + D GR ++ F + D +R ++ DG++V+G+ I +
Sbjct: 118 QDLKDYMRQAGEVTYADA-HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
>AK055213-1|BAB70875.1| 450|Homo sapiens mRNA. protein.
Length = 450
Score = 33.5 bits (73), Expect = 0.90
Identities = 35/168 (20%), Positives = 67/168 (39%), Gaps = 2/168 (1%)
Frame = -2
Query: 650 MVQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDT 471
MVQPFT F PQ T+ ++ + T A
Sbjct: 91 MVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQN 150
Query: 470 SALDGNYSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYPPPSVDLQALSNKM 291
+L Q + ++++ +++S +S + S + F + P DL+ + +
Sbjct: 151 GSLTTEGGAQTDGQQSQTQSSENSES----KSTPKRLHVSNIPFRFRDP--DLRQMFGQF 204
Query: 290 REVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 205 GKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 252
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 33.5 bits (73), Expect = 0.90
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 257 LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTI 159
L G A V F N +AE+ +K DG ++DGQ I
Sbjct: 178 LSKGYAYVEFENPDEAEKALKHMDGGQIDGQEI 210
>AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2
protein.
Length = 228
Score = 33.5 bits (73), Expect = 0.90
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 257 LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTI 159
L G A V F N +AE+ +K DG ++DGQ I
Sbjct: 124 LSKGYAYVEFENPDEAEKALKHMDGGQIDGQEI 156
>AF229058-1|AAL71905.1| 380|Homo sapiens hexaribonucleotide binding
protein 2 protein.
Length = 380
Score = 33.5 bits (73), Expect = 0.90
Identities = 35/168 (20%), Positives = 67/168 (39%), Gaps = 2/168 (1%)
Frame = -2
Query: 650 MVQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDT 471
MVQPFT F PQ T+ ++ + T A
Sbjct: 21 MVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQN 80
Query: 470 SALDGNYSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYPPPSVDLQALSNKM 291
+L Q + ++++ +++S +S + S + F + P DL+ + +
Sbjct: 81 GSLTTEGGAQTDGQQSQTQSSENSES----KSTPKRLHVSNIPFRFRDP--DLRQMFGQF 134
Query: 290 REVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 135 GKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 182
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.90
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 257 LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTI 159
L G A V F N +AE+ +K DG ++DGQ I
Sbjct: 201 LSKGYAYVEFENPDEAEKALKHMDGGQIDGQEI 233
>AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein.
Length = 192
Score = 33.5 bits (73), Expect = 0.90
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -2
Query: 311 QALSNKMREVGEVKFVDVLGMGR---AIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
Q L + MR+ GEV + D GR ++ F + D +R ++ DG++V+G+ I +
Sbjct: 118 QDLKDYMRQAGEVTYADA-HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 33.5 bits (73), Expect = 0.90
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -2
Query: 311 QALSNKMREVGEVKFVDVLGMGR---AIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
Q L + MR+ GEV + D GR ++ F + D +R ++ DG++V+G+ I +
Sbjct: 43 QDLKDYMRQAGEVTYADA-HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 97
>DQ778625-1|ABG77459.1| 451|Homo sapiens unknown protein.
Length = 451
Score = 33.1 bits (72), Expect = 1.2
Identities = 36/169 (21%), Positives = 69/169 (40%), Gaps = 3/169 (1%)
Frame = -2
Query: 650 MVQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDT 471
MVQPFT F PQ T+ ++ + T A +
Sbjct: 91 MVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGE----QSSNSP 146
Query: 470 SALDGNYSRQAVDDKRDSRAAPSAQSVHAFESDNTKQ-STSMVVFSYPPPSVDLQALSNK 294
S +G+ ++ + D + + + S ++ K+ S + F + P DL+ + +
Sbjct: 147 STQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDP--DLRQMFGQ 204
Query: 293 MREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 205 FGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 253
>AL079295-2|CAI19059.1| 367|Homo sapiens RNA binding motif protein
9 protein.
Length = 367
Score = 33.1 bits (72), Expect = 1.2
Identities = 36/169 (21%), Positives = 69/169 (40%), Gaps = 3/169 (1%)
Frame = -2
Query: 650 MVQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDT 471
MVQPFT F PQ T+ ++ + T A +
Sbjct: 21 MVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGE----QSSNSP 76
Query: 470 SALDGNYSRQAVDDKRDSRAAPSAQSVHAFESDNTKQ-STSMVVFSYPPPSVDLQALSNK 294
S +G+ ++ + D + + + S ++ K+ S + F + P DL+ + +
Sbjct: 77 STQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDP--DLRQMFGQ 134
Query: 293 MREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 135 FGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 183
>AL049748-3|CAI20525.1| 367|Homo sapiens RNA binding motif protein
9 protein.
Length = 367
Score = 33.1 bits (72), Expect = 1.2
Identities = 36/169 (21%), Positives = 69/169 (40%), Gaps = 3/169 (1%)
Frame = -2
Query: 650 MVQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDT 471
MVQPFT F PQ T+ ++ + T A +
Sbjct: 21 MVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGE----QSSNSP 76
Query: 470 SALDGNYSRQAVDDKRDSRAAPSAQSVHAFESDNTKQ-STSMVVFSYPPPSVDLQALSNK 294
S +G+ ++ + D + + + S ++ K+ S + F + P DL+ + +
Sbjct: 77 STQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDP--DLRQMFGQ 134
Query: 293 MREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 135 FGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 183
>AL009266-1|CAA15842.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 33.1 bits (72), Expect = 1.2
Identities = 36/169 (21%), Positives = 69/169 (40%), Gaps = 3/169 (1%)
Frame = -2
Query: 650 MVQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDT 471
MVQPFT F PQ T+ ++ + T A +
Sbjct: 21 MVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGE----QSSNSP 76
Query: 470 SALDGNYSRQAVDDKRDSRAAPSAQSVHAFESDNTKQ-STSMVVFSYPPPSVDLQALSNK 294
S +G+ ++ + D + + + S ++ K+ S + F + P DL+ + +
Sbjct: 77 STQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDP--DLRQMFGQ 134
Query: 293 MREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 135 FGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 183
>BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protein 1
protein.
Length = 395
Score = 32.3 bits (70), Expect = 2.1
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -2
Query: 476 DTSALDGNYSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYPPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 99 DTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 156
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 157 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 208
>AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ10165 fis, clone HEMBA1003591, weakly similar to
CHLOROPLAST 28 KD RIBONUCLEOPROTEIN PRECURSOR. ).
Length = 397
Score = 32.3 bits (70), Expect = 2.1
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -2
Query: 476 DTSALDGNYSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYPPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 79 DTSAQTVSGTATQADDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 136
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 137 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 188
>AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protein
variant 1 protein.
Length = 370
Score = 32.3 bits (70), Expect = 2.1
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -2
Query: 476 DTSALDGNYSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYPPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 79 DTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 136
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 137 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 188
>AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 32.3 bits (70), Expect = 2.1
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -2
Query: 476 DTSALDGNYSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYPPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 99 DTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 156
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 157 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 208
>AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 32.3 bits (70), Expect = 2.1
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -2
Query: 476 DTSALDGNYSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYPPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 99 DTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 156
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 157 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 208
>AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 32.3 bits (70), Expect = 2.1
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -2
Query: 476 DTSALDGNYSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYPPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 99 DTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 156
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 157 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 208
>AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 32.3 bits (70), Expect = 2.1
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -2
Query: 476 DTSALDGNYSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYPPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 99 DTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 156
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 157 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 208
>AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 32.3 bits (70), Expect = 2.1
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -2
Query: 476 DTSALDGNYSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYPPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 99 DTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 156
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 157 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 208
>AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protein
protein.
Length = 377
Score = 32.3 bits (70), Expect = 2.1
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -2
Query: 476 DTSALDGNYSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYPPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 59 DTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 116
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 117 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 168
>AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 32.3 bits (70), Expect = 2.1
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -2
Query: 476 DTSALDGNYSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYPPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 99 DTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 156
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 157 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 208
>AY960684-1|AAX84843.1| 370|Homo sapiens RNA binding motif protein
9 protein.
Length = 370
Score = 31.9 bits (69), Expect = 2.7
Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 2/168 (1%)
Frame = -2
Query: 650 MVQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDT 471
MVQPFT F PQ T+ ++ + T A
Sbjct: 21 MVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQN 80
Query: 470 SALDGNYSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYPPPSVDLQALSNKM 291
+L Q + ++++ +++ +S + S + F + P DL+ + +
Sbjct: 81 GSLTTEGGAQTDGQQSQTQSSENSEG----KSTPKRLHVSNIPFRFRDP--DLRQMFGQF 134
Query: 290 REVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 135 GKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 182
>U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein.
Length = 272
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -2
Query: 320 VDLQALSNKMREVGEVKFVDV--LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
V Q L + MR+ GEV F D + +V F + D + ++ G +++G+ I++
Sbjct: 119 VSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKL 176
>BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -2
Query: 320 VDLQALSNKMREVGEVKFVDV--LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
V Q L + MR+ GEV F D + +V F + D + ++ G +++G+ I++
Sbjct: 119 VSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKL 176
>BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -2
Query: 320 VDLQALSNKMREVGEVKFVDV--LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
V Q L + MR+ GEV F D + +V F + D + ++ G +++G+ I++
Sbjct: 119 VSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKL 176
>BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -2
Query: 320 VDLQALSNKMREVGEVKFVDV--LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
V Q L + MR+ GEV F D + +V F + D + ++ G +++G+ I++
Sbjct: 119 VSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKL 176
>AK093052-1|BAC04036.1| 279|Homo sapiens protein ( Homo sapiens
cDNA FLJ35733 fis, clone TESTI2003277, weakly similar to
ANTER-SPECIFIC PROLINE-RICH PROTEIN APG PRECURSOR. ).
Length = 279
Score = 31.1 bits (67), Expect = 4.8
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Frame = -3
Query: 406 PPRSPYTHLNLTTPSNRPAWWSLVIRLRAWT--SR----PSATRCG--RSAR*SSWMCW- 254
PPRS + L P P W L +R+ W SR P++T CG ++ SSW +
Sbjct: 54 PPRSSPSLCALRGPGRAPTCWPLRVRM-PWRAGSRPCRVPASTTCGWWCASWSSSWRLYV 112
Query: 253 AWVGRSSASSTCATP 209
AW S + S C P
Sbjct: 113 AWPCPSPSPSPCPCP 127
>BC117321-1|AAI17322.1| 1486|Homo sapiens RAPGEF2 protein protein.
Length = 1486
Score = 30.3 bits (65), Expect = 8.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 427 SETAGPPPPRSPYTHLNLTTPSNRPAW 347
S+TAGP + P+ H + P N+P W
Sbjct: 1430 SDTAGPSSVQQPHGHPTSSRPVNKPQW 1456
>AC074344-1|AAY40909.1| 1479|Homo sapiens unknown protein.
Length = 1479
Score = 30.3 bits (65), Expect = 8.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 427 SETAGPPPPRSPYTHLNLTTPSNRPAW 347
S+TAGP + P+ H + P N+P W
Sbjct: 1422 SDTAGPSSVQQPHGHPTSSRPVNKPQW 1448
>AB002311-1|BAA20772.2| 1508|Homo sapiens KIAA0313 protein.
Length = 1508
Score = 30.3 bits (65), Expect = 8.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 427 SETAGPPPPRSPYTHLNLTTPSNRPAW 347
S+TAGP + P+ H + P N+P W
Sbjct: 1451 SDTAGPSSVQQPHGHPTSSRPVNKPQW 1477
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,113,183
Number of Sequences: 237096
Number of extensions: 2364036
Number of successful extensions: 11234
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 10545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11193
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -