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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_I17
         (780 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00043-9|AAC77506.1|  474|Caenorhabditis elegans Temporarily ass...   262   1e-70
Z79601-2|CAB01886.1|  482|Caenorhabditis elegans Hypothetical pr...   262   3e-70
Z70756-6|CAA94792.1|  290|Caenorhabditis elegans Hypothetical pr...    34   0.099
Z82083-5|CAB04973.1|  298|Caenorhabditis elegans Hypothetical pr...    33   0.23 
Z70756-4|CAA94788.1|  290|Caenorhabditis elegans Hypothetical pr...    31   0.70 
U80447-7|AAB37811.1|  518|Caenorhabditis elegans Hypothetical pr...    31   0.92 
U40187-2|AAA81159.1|  282|Caenorhabditis elegans Collagen protei...    30   1.6  
AF022985-9|AAB69960.1|  314|Caenorhabditis elegans Collagen prot...    30   2.1  
M25479-1|AAA27993.1|  282|Caenorhabditis elegans collagen protein.     29   3.7  
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    29   3.7  
Z99169-1|CAB16306.2|  966|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p...    29   4.9  
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue...    29   4.9  
U12966-6|AAM48533.1|  783|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AB055112-1|BAB62293.1|  966|Caenorhabditis elegans VHA-7 protein.      29   4.9  
Z81489-14|CAN86572.1|  420|Caenorhabditis elegans Hypothetical p...    28   6.5  
Z81489-13|CAB04012.1|  426|Caenorhabditis elegans Hypothetical p...    28   6.5  
Z81087-2|CAN86636.1|  420|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z81087-1|CAB03122.1|  426|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AL032632-7|CAA21586.1|  313|Caenorhabditis elegans Hypothetical ...    28   6.5  
AF000198-6|AAB53056.2|  526|Caenorhabditis elegans Calcium chann...    28   6.5  
AC026301-13|AAP13737.1|  766|Caenorhabditis elegans Hypothetical...    28   6.5  
AL021448-3|CAA16275.1|  291|Caenorhabditis elegans Hypothetical ...    28   8.6  

>U00043-9|AAC77506.1|  474|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 99 protein.
          Length = 474

 Score =  262 bits (643), Expect = 1e-70
 Identities = 114/160 (71%), Positives = 136/160 (85%)
 Frame = -2

Query: 590 GSGIKWDLRKTQPYDAYPFVEFDVPIGTHGDCYDRYLCRVEEMRQSLRIIEQCLNDMPPG 411
           GSGIK D+RKT+PYDAY  +EFDVPIGT GDCYDRYLCRVEEMRQSL I+ QCLN MP G
Sbjct: 306 GSGIKQDVRKTEPYDAYADMEFDVPIGTKGDCYDRYLCRVEEMRQSLNIVHQCLNKMPTG 365

Query: 410 EVKTDDAKLTPPSREEMKTSMEALIHHFKLFTQGYQVPPGSTYTAVEAPKGEFGIYLVSD 231
           E+K+DD K+ PP R EMK +ME+LIHHFK FT+G+QVPPG+TY  +EAPKGEFG+YLV+D
Sbjct: 366 EIKSDDHKVVPPKRAEMKENMESLIHHFKFFTEGFQVPPGATYVPIEAPKGEFGVYLVAD 425

Query: 230 GGSKPYRCKIKAPGFAHLAALEKIGRNSMLADIVAIIGTL 111
           G  KPYRC I+APGFAHLAA+  +   S++ADIVA+IGT+
Sbjct: 426 GTGKPYRCFIRAPGFAHLAAIHDVCYMSLIADIVAVIGTM 465



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = -1

Query: 756 GSXDDXYEFSSKFAERIDEVEDVLTTNRIW 667
           G  DD Y+++ KF  RIDE+ED+LT NRIW
Sbjct: 250 GLMDDIYDWAVKFPARIDELEDMLTENRIW 279



 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 18/24 (75%), Positives = 22/24 (91%)
 Frame = -3

Query: 661 RTKDIGVVTAQDALNYGFSGVMLR 590
           RT DIG+V+A DALN+GFSGVM+R
Sbjct: 282 RTVDIGLVSASDALNWGFSGVMVR 305


>Z79601-2|CAB01886.1|  482|Caenorhabditis elegans Hypothetical
           protein K09A9.5 protein.
          Length = 482

 Score =  262 bits (641), Expect = 3e-70
 Identities = 113/160 (70%), Positives = 135/160 (84%)
 Frame = -2

Query: 590 GSGIKWDLRKTQPYDAYPFVEFDVPIGTHGDCYDRYLCRVEEMRQSLRIIEQCLNDMPPG 411
           GSGIK D+RKT+PYDAY  +EFDVPIGT GDCYDRYLCR+EEMRQSL I+ QCLN MP G
Sbjct: 314 GSGIKQDVRKTEPYDAYADMEFDVPIGTKGDCYDRYLCRIEEMRQSLNIVHQCLNKMPAG 373

Query: 410 EVKTDDAKLTPPSREEMKTSMEALIHHFKLFTQGYQVPPGSTYTAVEAPKGEFGIYLVSD 231
           E+K DD K+ PP R EMK +ME+LIHHFK FT+G+QVPPG+TY  +EAPKGEFG+YLV+D
Sbjct: 374 EIKVDDHKVVPPKRAEMKENMESLIHHFKFFTEGFQVPPGATYVPIEAPKGEFGVYLVAD 433

Query: 230 GGSKPYRCKIKAPGFAHLAALEKIGRNSMLADIVAIIGTL 111
           G  KPYRC I+APGFAHLAA+  +   S++ADIVA+IGT+
Sbjct: 434 GTGKPYRCFIRAPGFAHLAAIHDVCYMSLIADIVAVIGTM 473



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = -1

Query: 756 GSXDDXYEFSSKFAERIDEVEDVLTTNRIW 667
           G  DD Y+++ KF ERIDE+ED+LT NRIW
Sbjct: 258 GLMDDIYDWAIKFPERIDELEDMLTENRIW 287



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/24 (75%), Positives = 22/24 (91%)
 Frame = -3

Query: 661 RTKDIGVVTAQDALNYGFSGVMLR 590
           RT DIG+V+A DALN+GFSGVM+R
Sbjct: 290 RTIDIGLVSAADALNWGFSGVMVR 313


>Z70756-6|CAA94792.1|  290|Caenorhabditis elegans Hypothetical
           protein T06E4.6 protein.
          Length = 290

 Score = 34.3 bits (75), Expect = 0.099
 Identities = 24/60 (40%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = -1

Query: 468 GDAPVPPHHRAVPQRHAP-RGGQDRRRQAHPALPGGDEDVHGGADPPLQAVHAGLPGAAG 292
           GDA  P    A     AP +GGQ  R    PA   G +   GG   P Q+  AG PG AG
Sbjct: 173 GDAGAPGQAGAPGHPGAPGQGGQRSRGTPGPAGAPGPQGPAGGPGQPGQSGGAGAPGPAG 232



 Score = 32.7 bits (71), Expect = 0.30
 Identities = 29/99 (29%), Positives = 33/99 (33%)
 Frame = -1

Query: 462 APVPPHHRAVPQRHAPRGGQDRRRQAHPALPGGDEDVHGGADPPLQAVHAGLPGAAGLHL 283
           AP P      P    P G   +        P G +   G A  P QA   G PGA G   
Sbjct: 135 APGPAGAPGAPGPQGPSGAPGQDAVGEGPGPAGPQGPAGDAGAPGQAGAPGHPGAPGQGG 194

Query: 282 HRRGGSQGGVRDLPRLRRRLQAVQMQDQGAGLRAPGGAG 166
            R  G+ G     P  +          Q  G  APG AG
Sbjct: 195 QRSRGTPGPA-GAPGPQGPAGGPGQPGQSGGAGAPGPAG 232


>Z82083-5|CAB04973.1|  298|Caenorhabditis elegans Hypothetical
           protein ZK1010.7 protein.
          Length = 298

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = -1

Query: 459 PVPPHHRAVPQRHAPRGGQDRRRQAHPALPG--GDEDVHGGADPPLQAVHAGLPGAAG 292
           P PP +     R  PRG Q R   + PALPG  G     G +  P     AG PG+ G
Sbjct: 185 PGPPGNNGEGGRDGPRGEQGRPAISTPALPGDPGAPGEPGPSGLPGDQGQAGRPGSDG 242


>Z70756-4|CAA94788.1|  290|Caenorhabditis elegans Hypothetical
           protein T06E4.4 protein.
          Length = 290

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 29/99 (29%), Positives = 33/99 (33%)
 Frame = -1

Query: 462 APVPPHHRAVPQRHAPRGGQDRRRQAHPALPGGDEDVHGGADPPLQAVHAGLPGAAGLHL 283
           AP P      P    P G   +        P G +   G A  P QA   G PGA G   
Sbjct: 135 APGPAGAPGAPGPQGPSGAPGQDAVGGGPGPAGPQGPAGDAGAPGQAGAPGHPGAPGQGG 194

Query: 282 HRRGGSQGGVRDLPRLRRRLQAVQMQDQGAGLRAPGGAG 166
            R  G+  G    P  +          Q  G  APG AG
Sbjct: 195 QRSRGTP-GPSGAPGPQGPAGGPGQPGQSGGAGAPGPAG 232


>U80447-7|AAB37811.1|  518|Caenorhabditis elegans Hypothetical
           protein F55F8.7 protein.
          Length = 518

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 20/54 (37%), Positives = 29/54 (53%)
 Frame = -2

Query: 428 NDMPPGEVKTDDAKLTPPSREEMKTSMEALIHHFKLFTQGYQVPPGSTYTAVEA 267
           N+ PP E  +D  K+      +MK    + +H  K+  +GY +PP  TYTA EA
Sbjct: 154 NEQPP-EPGSDPRKIWAFKAAKMKCQAISKLHQDKI--KGY-MPPNCTYTAYEA 203


>U40187-2|AAA81159.1|  282|Caenorhabditis elegans Collagen protein 8
           protein.
          Length = 282

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 31/97 (31%), Positives = 35/97 (36%), Gaps = 6/97 (6%)
 Frame = -1

Query: 432 PQRHAPRGGQDRRRQAHPALPGGDEDVHGGADP------PLQAVHAGLPGAAGLHLHRRG 271
           P R  PRG         PA P GD+  HG   P      P +   AG PGAAG       
Sbjct: 140 PGRPGPRGPSGL---VGPAGPAGDQGRHGPPGPTGGQGGPGEQGDAGRPGAAGRPGPPGP 196

Query: 270 GSQGGVRDLPRLRRRLQAVQMQDQGAGLRAPGGAGED 160
             + G    P    R      +        PGGAGED
Sbjct: 197 RGEPGTEYRPGQAGRAGPPGPRGPPGPEGNPGGAGED 233


>AF022985-9|AAB69960.1|  314|Caenorhabditis elegans Collagen protein
           141 protein.
          Length = 314

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = -1

Query: 468 GDAPVP--PHHRAVPQRHAPRGGQDRRRQAHPALPGGDEDVHGGADPPLQAVHAGLPGAA 295
           GDA  P  P H   P     RGGQ  R    P+   G +   GG   P Q+  +G PG  
Sbjct: 183 GDAGAPGQPGHPGSPGNPG-RGGQRSRGLPGPSGRPGPQGPAGGPGQPGQSGGSGTPGQP 241

Query: 294 G 292
           G
Sbjct: 242 G 242


>M25479-1|AAA27993.1|  282|Caenorhabditis elegans collagen protein.
          Length = 282

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 26/80 (32%), Positives = 30/80 (37%), Gaps = 6/80 (7%)
 Frame = -1

Query: 381 PALPGGDEDVHGGADP------PLQAVHAGLPGAAGLHLHRRGGSQGGVRDLPRLRRRLQ 220
           PA P GD+  HG   P      P +   AG PGAAG         + G    P    R  
Sbjct: 154 PAGPAGDQGRHGPPGPTGGQGGPGEQGDAGRPGAAGCPGPPGPRGEPGTEYRPGQAGRAG 213

Query: 219 AVQMQDQGAGLRAPGGAGED 160
               +        PGGAGED
Sbjct: 214 PPGPRGPPGPEGNPGGAGED 233


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
 Frame = -1

Query: 447 HHRAVPQRHAPRGGQDRRRQAHPALPGGDEDVHGGADPPLQAVHAG-LPGAAGLHLHRRG 271
           H R   + H+PRG     R   P  PG     HG   PP    H G  P   G H H   
Sbjct: 366 HGRHGSRSHSPRGHGHGGRHGPPHCPGR----HGHHGPPHHHHHDGRSPSRHGHHHHHHH 421

Query: 270 G 268
           G
Sbjct: 422 G 422


>Z99169-1|CAB16306.2|  966|Caenorhabditis elegans Hypothetical
           protein C26H9A.1 protein.
          Length = 966

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
 Frame = -2

Query: 536 FVEFDVPIGTHGDCYDRYLCRVEEMRQSLRIIEQCLNDMPPG-EVKT-DDAKLTPPSREE 363
           FV+ +  +  +   + + + R EEM + LR +E+ +    PG + K+ D   L+ P++ E
Sbjct: 81  FVDLNAKMSLYSRTFVKQMRRCEEMERKLRFLEKQVITCKPGLDPKSIDYTDLSAPTQAE 140

Query: 362 M 360
           M
Sbjct: 141 M 141


>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
            protein T04H1.4b protein.
          Length = 1312

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 476  RVEEMRQSLRIIEQCLN-DMPPGEVKTDDAKLTPPSREEMKTSMEALIHHFK 324
            +++E+++ +  I Q  N D+P  + K DD      S+EE K   E  +   K
Sbjct: 887  KIKEIQECITAISQKRNEDLPDAQFKKDDLTRNVSSKEEEKKKAEMEVQMMK 938


>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical protein
            T04H1.4a protein.
          Length = 1298

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 476  RVEEMRQSLRIIEQCLN-DMPPGEVKTDDAKLTPPSREEMKTSMEALIHHFK 324
            +++E+++ +  I Q  N D+P  + K DD      S+EE K   E  +   K
Sbjct: 873  KIKEIQECITAISQKRNEDLPDAQFKKDDLTRNVSSKEEEKKKAEMEVQMMK 924


>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
            ceRAD50 protein.
          Length = 1298

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 476  RVEEMRQSLRIIEQCLN-DMPPGEVKTDDAKLTPPSREEMKTSMEALIHHFK 324
            +++E+++ +  I Q  N D+P  + K DD      S+EE K   E  +   K
Sbjct: 873  KIKEIQECITAISQKRNEDLPDAQFKKDDLTRNVSSKEEEKKKAEMEVQMMK 924


>U12966-6|AAM48533.1|  783|Caenorhabditis elegans Hypothetical
           protein F54D8.6 protein.
          Length = 783

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
 Frame = -1

Query: 417 PRGGQDRRRQAHPA---LPGGDEDVHGG---ADPPLQAVHAGL---PGAAGLHLHRRGGS 265
           P GG  R     P    +PG D    GG    D P  +   G+   PG   +   +R G+
Sbjct: 573 PPGGDSRGVDRPPGGGGIPGVDRPPGGGRRGVDRPPGSGMPGIDRPPGGDRMGDKQRRGA 632

Query: 264 QGGVRDLPRLRRR 226
           +GGV++  R RRR
Sbjct: 633 RGGVKERERKRRR 645


>AB055112-1|BAB62293.1|  966|Caenorhabditis elegans VHA-7 protein.
          Length = 966

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
 Frame = -2

Query: 536 FVEFDVPIGTHGDCYDRYLCRVEEMRQSLRIIEQCLNDMPPG-EVKT-DDAKLTPPSREE 363
           FV+ +  +  +   + + + R EEM + LR +E+ +    PG + K+ D   L+ P++ E
Sbjct: 81  FVDLNAKMSLYSRTFVKQMRRCEEMERKLRFLEKQVITCKPGLDPKSIDYTDLSAPTQAE 140

Query: 362 M 360
           M
Sbjct: 141 M 141


>Z81489-14|CAN86572.1|  420|Caenorhabditis elegans Hypothetical
           protein F53E4.1b protein.
          Length = 420

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 678 NRIWCSGPRTSAWSLRRTRSTTASA 604
           N ++C  P+TS WS+   R T  SA
Sbjct: 284 NELYCFDPKTSMWSVISVRGTYPSA 308


>Z81489-13|CAB04012.1|  426|Caenorhabditis elegans Hypothetical
           protein F53E4.1a protein.
          Length = 426

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 678 NRIWCSGPRTSAWSLRRTRSTTASA 604
           N ++C  P+TS WS+   R T  SA
Sbjct: 290 NELYCFDPKTSMWSVISVRGTYPSA 314


>Z81087-2|CAN86636.1|  420|Caenorhabditis elegans Hypothetical
           protein F53E4.1b protein.
          Length = 420

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 678 NRIWCSGPRTSAWSLRRTRSTTASA 604
           N ++C  P+TS WS+   R T  SA
Sbjct: 284 NELYCFDPKTSMWSVISVRGTYPSA 308


>Z81087-1|CAB03122.1|  426|Caenorhabditis elegans Hypothetical
           protein F53E4.1a protein.
          Length = 426

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 678 NRIWCSGPRTSAWSLRRTRSTTASA 604
           N ++C  P+TS WS+   R T  SA
Sbjct: 290 NELYCFDPKTSMWSVISVRGTYPSA 314


>AL032632-7|CAA21586.1|  313|Caenorhabditis elegans Hypothetical
           protein Y11D7A.11 protein.
          Length = 313

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 33/95 (34%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
 Frame = -1

Query: 432 PQRHAPRG--GQDRR--RQAHPALPGGDEDVHGGADPPLQAVHAGLPGAAGLHLHRRGGS 265
           P     RG  G+D R  R+    +PG   ++ G A PP      GL GA G       GS
Sbjct: 204 PGEQGERGPNGEDGRPGRRGDDGMPGTVNEIPGQAGPP------GLRGAPG-----ATGS 252

Query: 264 QGGVRDLPRLRRRLQAVQMQDQGAGLRAPGGAGED 160
           QG   +  R   +  A    DQG    APGG G D
Sbjct: 253 QGPRGNDGRPGNKGPAGPPGDQGFD-GAPGGPGAD 286


>AF000198-6|AAB53056.2|  526|Caenorhabditis elegans Calcium channel,
           beta subunit protein1 protein.
          Length = 526

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = -1

Query: 348 GGADPPLQA--VHAGLPGAAGLHLHRRGGSQGGVRDLPRLRRRLQA 217
           G  +PP  A  + +G PG   + + +  GS GG++  P+ ++ +Q+
Sbjct: 445 GSMNPPYLAPPMQSGRPGMPSISVQQATGSYGGMQQQPQQQQPMQS 490


>AC026301-13|AAP13737.1|  766|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.1 protein.
          Length = 766

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = -2

Query: 491 DRYLCRVEEMRQSLRIIEQCLNDMPPGEVKTDDAKLTPPSREEMKT 354
           D  L      R+S RI   C +   PG       KLT  SR+  +T
Sbjct: 610 DAVLLLTPRRRRSTRIQNSCASAAAPGAASLSTEKLTQSSRKRART 655


>AL021448-3|CAA16275.1|  291|Caenorhabditis elegans Hypothetical
           protein Y2H9A.3 protein.
          Length = 291

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 20/67 (29%), Positives = 22/67 (32%)
 Frame = -1

Query: 459 PVPPHHRAVPQRHAPRGGQDRRRQAHPALPGGDEDVHGGADPPLQAVHAGLPGAAGLHLH 280
           P P      P    P G   +  Q     P G     G A  P      G PGA G   H
Sbjct: 138 PGPAGEAGAPGPAGPDGQPGQDGQGGQPGPAGPAGPAGDAGAPGAPGQDGQPGAPGQDGH 197

Query: 279 RRGGSQG 259
           R  G+ G
Sbjct: 198 RSTGTPG 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,913,375
Number of Sequences: 27780
Number of extensions: 301709
Number of successful extensions: 1179
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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