Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_I16
         (792 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0648 + 5496696-5497052                                           37   0.021
02_05_1233 - 35112629-35112844,35112922-35112987,35113222-351132...    29   3.2  
01_06_0968 + 33466574-33466607,33467087-33467115,33467438-334675...    29   3.2  

>12_01_0648 + 5496696-5497052
          Length = 118

 Score = 36.7 bits (81), Expect = 0.021
 Identities = 21/51 (41%), Positives = 23/51 (45%)
 Frame = -2

Query: 767 GXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPG 615
           G GAGP P G  R +G   V P  G   PG   A   G  +   G  SAPG
Sbjct: 28  GGGAGP-PGGGARPSGGDAVTPGDGAGLPGGGAAALDGDAAAPGGSASAPG 77


>02_05_1233 -
           35112629-35112844,35112922-35112987,35113222-35113282,
           35115319-35115401,35115483-35115563,35115661-35115693,
           35115841-35115942,35116023-35116118,35116205-35116366,
           35116469-35116660,35116742-35116852,35116940-35117011,
           35117111-35117324,35117422-35117699
          Length = 588

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -1

Query: 216 KKKINVALNLIQHVLIEIKKKCLRLVKEE 130
           +KK+N AL LI   L E+   C RLV+EE
Sbjct: 321 QKKVNEALALINKTLDELIDICKRLVEEE 349


>01_06_0968 +
           33466574-33466607,33467087-33467115,33467438-33467595,
           33468319-33468436,33468520-33468708,33469008-33469343,
           33469468-33469569,33469696-33469890,33469993-33470155,
           33470314-33470579,33470670-33470765,33470860-33471255,
           33471403-33471501
          Length = 726

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -2

Query: 620 PGRTGPSTRHYPRAAALLPGTAEAQETSAI 531
           PGR GPS   YP   +LLP    AQ++S I
Sbjct: 609 PGRGGPSL--YPTGFSLLPDVEAAQDSSGI 636


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,284,979
Number of Sequences: 37544
Number of extensions: 242429
Number of successful extensions: 467
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)