Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_I16
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 36 0.033
AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen pro... 33 0.23
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 31 0.71
U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protei... 31 0.94
U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 31 0.94
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 29 2.9
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 29 2.9
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 2.9
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 29 2.9
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 29 2.9
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 29 2.9
L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protei... 29 2.9
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 3.8
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 29 3.8
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 29 3.8
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 29 5.0
U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protei... 29 5.0
AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical ... 29 5.0
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 28 6.7
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 28 6.7
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 28 6.7
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 28 6.7
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 28 6.7
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 28 6.7
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 28 6.7
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 8.8
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 28 8.8
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 35.9 bits (79), Expect = 0.033
Identities = 22/76 (28%), Positives = 25/76 (32%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P P +G P DG GH R G PG G G+ PG
Sbjct: 185 PGQPGPQGNAGQPGRDGNPGQPGHPGKDGRRGHGSPGAPGRAGQPGRQGAPGNPGRPGER 244
Query: 608 GPSTRHYPRAAALLPG 561
GPS P + PG
Sbjct: 245 GPSGPCGPAGRSGQPG 260
>AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen
protein 106 protein.
Length = 296
Score = 33.1 bits (72), Expect = 0.23
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Frame = -2
Query: 758 AGP-NPDGXXRAAGHXXVXPRXGXHYPGXRPARXXG-GXSXESGHXSAPGRTGPSTRHYP 585
AGP P G AG G P G G + GH PGR GP
Sbjct: 140 AGPAGPPGPDGCAGEPGTDGAPGEDGQNGAPGSPGGPGETGPQGHQGKPGRAGPRGPPGA 199
Query: 584 RAAALLPGTA 555
+ LPG+A
Sbjct: 200 KGQTYLPGSA 209
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = -2
Query: 782 PPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRTG 606
PP G GP P G AG P G P P G + G APG G
Sbjct: 176 PPGPAGPAGGPGPAGPPGPAGADGNTPSGGGEGPAGPPG--PPGPAGNPGTDGAPGNPG 232
>U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protein
10 protein.
Length = 294
Score = 31.1 bits (67), Expect = 0.94
Identities = 22/78 (28%), Positives = 26/78 (33%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P P G P DG A G + G PG A G + +G APG+
Sbjct: 185 PGAPGDNGQDGAPGQDGQPGAPGQDG---QRGSGAPGGPGAPGNAGPAGPAGQDGAPGQD 241
Query: 608 GPSTRHYPRAAALLPGTA 555
G P PG A
Sbjct: 242 GQPGPAGPAGQDGAPGNA 259
>U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein
144 protein.
Length = 306
Score = 31.1 bits (67), Expect = 0.94
Identities = 22/78 (28%), Positives = 26/78 (33%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P P G P DG A G + G PG A G + +G APG+
Sbjct: 197 PGAPGDNGQDGAPGQDGQPGAPGQDG---QRGSGAPGGPGAPGNAGPAGPAGQDGAPGQD 253
Query: 608 GPSTRHYPRAAALLPGTA 555
G P PG A
Sbjct: 254 GQPGPAGPAGQDGAPGNA 271
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 683 PGXRPARXXGGXSXESGHXSAPGRTGP 603
PG + R G E GH APG+ GP
Sbjct: 42 PGTKGERGNPGFGGEPGHPGAPGQDGP 68
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical
protein K04H4.1a protein.
Length = 1759
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 683 PGXRPARXXGGXSXESGHXSAPGRTGP 603
PG + R G E GH APG+ GP
Sbjct: 42 PGTKGERGNPGFGGEPGHPGAPGQDGP 68
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/63 (30%), Positives = 22/63 (34%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P PP G P P G G + YPG G + G APG +
Sbjct: 380 PGPPGTDGYPGAPGPAGPIGNTGGPGLPG-----YPGNEGLPGPKGDKGDGGIPGAPGVS 434
Query: 608 GPS 600
GPS
Sbjct: 435 GPS 437
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/63 (30%), Positives = 22/63 (34%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P PP G P P G G + YPG G + G APG +
Sbjct: 379 PGPPGTDGYPGAPGPAGPIGNTGGPGLPG-----YPGNEGLPGPKGDKGDGGIPGAPGVS 433
Query: 608 GPS 600
GPS
Sbjct: 434 GPS 436
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV)
collagen protein.
Length = 1758
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 683 PGXRPARXXGGXSXESGHXSAPGRTGP 603
PG + R G E GH APG+ GP
Sbjct: 42 PGTKGERGNPGFGGEPGHPGAPGQDGP 68
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/63 (30%), Positives = 22/63 (34%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P PP G P P G G + YPG G + G APG +
Sbjct: 379 PGPPGTDGYPGAPGPAGPIGNTGGPGLPG-----YPGNEGLPGPKGDKGDGGIPGAPGVS 433
Query: 608 GPS 600
GPS
Sbjct: 434 GPS 436
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/63 (30%), Positives = 22/63 (34%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P PP G P P G G + YPG G + G APG +
Sbjct: 380 PGPPGTDGYPGAPGPAGPIGNTGGPGLPG-----YPGNEGLPGPKGDKGDGGIPGAPGVS 434
Query: 608 GPS 600
GPS
Sbjct: 435 GPS 437
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/63 (30%), Positives = 22/63 (34%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P PP G P P G G + YPG G + G APG +
Sbjct: 416 PGPPGTDGYPGAPGPAGPIGNTGGPGLPG-----YPGNEGLPGPKGDKGDGGIPGAPGVS 470
Query: 608 GPS 600
GPS
Sbjct: 471 GPS 473
>L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protein
91 protein.
Length = 278
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/78 (28%), Positives = 27/78 (34%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P PP G P DG AAG V + G + G + +G APG
Sbjct: 93 PGPPGAPGAAGEPGVDGDAGAAGIDGVAIQFA-SAAGGACIQCPAGEAGPAGAPGAPGPA 151
Query: 608 GPSTRHYPRAAALLPGTA 555
GP + PG A
Sbjct: 152 GPDGQPGADGQGGAPGPA 169
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/70 (32%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P P G P PDG AGH G PG + G E G A G
Sbjct: 211 PGQPGEPGSPGEPGPDGR---AGHPGRNGPPGP--PGDNGGQGEPGKDGEDGENGAAGAA 265
Query: 608 GP--STRHYP 585
GP S H P
Sbjct: 266 GPKGSCDHCP 275
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/70 (32%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P P G P PDG AGH G PG + G E G A G
Sbjct: 211 PGQPGEPGSPGEPGPDGR---AGHPGRNGPPGP--PGDNGGQGEPGKDGEDGENGAAGAA 265
Query: 608 GP--STRHYP 585
GP S H P
Sbjct: 266 GPKGSCDHCP 275
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/75 (29%), Positives = 25/75 (33%), Gaps = 1/75 (1%)
Frame = -2
Query: 782 PPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRTGP 603
PP G P PDG A G+ + G P P G + G PG G
Sbjct: 205 PPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPG--IPGAPGQPGRPGPPGEPGT 262
Query: 602 -STRHYPRAAALLPG 561
T P A PG
Sbjct: 263 YKTEVGPAGRAGAPG 277
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/75 (29%), Positives = 25/75 (33%), Gaps = 1/75 (1%)
Frame = -2
Query: 782 PPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRTGP 603
PP G P PDG A G+ + G P P G + G PG G
Sbjct: 186 PPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPG--IPGAPGQPGRPGPPGEPGT 243
Query: 602 -STRHYPRAAALLPG 561
T P A PG
Sbjct: 244 YKTEVGPAGRAGAPG 258
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/76 (26%), Positives = 23/76 (30%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P P G P G A G + G PG A G + SG PG+
Sbjct: 198 PGAPGAPGDNGQPGFPGQDGAPGQPGADGQRGAGTPGAPGAPGNAGPAGPSGQDGFPGQD 257
Query: 608 GPSTRHYPRAAALLPG 561
G P PG
Sbjct: 258 GAPGSAGPAGQDGFPG 273
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/76 (26%), Positives = 23/76 (30%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P P G P G A G + G PG A G + SG PG+
Sbjct: 182 PGAPGAPGDNGQPGFPGQDGAPGQPGADGQRGAGTPGAPGAPGNAGPAGPSGQDGFPGQD 241
Query: 608 GPSTRHYPRAAALLPG 561
G P PG
Sbjct: 242 GAPGSAGPAGQDGFPG 257
>U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protein
171 protein.
Length = 307
Score = 28.7 bits (61), Expect = 5.0
Identities = 23/76 (30%), Positives = 28/76 (36%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P PP G P+G G G + G A GG +SG+ PG
Sbjct: 165 PGPPGPAGSIGPKGPNGNPGFDGQPGAPGNNG--FAGGPGAPGLGGKDGQSGNAGVPGAP 222
Query: 608 GPSTRHYPRAAALLPG 561
G T + R A LPG
Sbjct: 223 GKIT-NIQRPAG-LPG 236
>AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical
protein Y2H9A.3 protein.
Length = 291
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/77 (27%), Positives = 26/77 (33%)
Frame = -2
Query: 779 PXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRTGPS 600
P G G P P G AG G P + + G APG GP+
Sbjct: 156 PGQDGQGGQPGPAGPAGPAGDAGAPGAPGQDGQPGAPGQDGHRSTGTPGAAGAPGPAGPA 215
Query: 599 TRHYPRAAALLPGTAEA 549
+ +A PG A A
Sbjct: 216 GQDGQPGSAGGPGEAGA 232
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/61 (26%), Positives = 18/61 (29%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P PP G P P G G P+ PG G + G PG
Sbjct: 751 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPK 810
Query: 608 G 606
G
Sbjct: 811 G 811
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/61 (26%), Positives = 18/61 (29%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P PP G P P G G P+ PG G + G PG
Sbjct: 354 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPK 413
Query: 608 G 606
G
Sbjct: 414 G 414
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/61 (26%), Positives = 18/61 (29%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P PP G P P G G P+ PG G + G PG
Sbjct: 714 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPK 773
Query: 608 G 606
G
Sbjct: 774 G 774
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/61 (26%), Positives = 18/61 (29%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P PP G P P G G P+ PG G + G PG
Sbjct: 226 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPK 285
Query: 608 G 606
G
Sbjct: 286 G 286
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/61 (26%), Positives = 18/61 (29%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P PP G P P G G P+ PG G + G PG
Sbjct: 751 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPK 810
Query: 608 G 606
G
Sbjct: 811 G 811
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/61 (26%), Positives = 18/61 (29%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P PP G P P G G P+ PG G + G PG
Sbjct: 354 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPK 413
Query: 608 G 606
G
Sbjct: 414 G 414
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/61 (26%), Positives = 18/61 (29%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P PP G P P G G P+ PG G + G PG
Sbjct: 714 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPK 773
Query: 608 G 606
G
Sbjct: 774 G 774
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/77 (31%), Positives = 26/77 (33%), Gaps = 1/77 (1%)
Frame = -2
Query: 788 PN-PPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGR 612
PN PP G P G AG G H P PA G +G PG
Sbjct: 165 PNGPPGPNGHPGQPGRPGPAGPAGPEGKDGPVGPHGPAG-PAGPRG-TRHSAGVPGKPGD 222
Query: 611 TGPSTRHYPRAAALLPG 561
GP P+ A PG
Sbjct: 223 VGPCGPEGPKGAPGTPG 239
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/61 (26%), Positives = 18/61 (29%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P PP G P P G G P+ PG G + G PG
Sbjct: 226 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPK 285
Query: 608 G 606
G
Sbjct: 286 G 286
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/61 (26%), Positives = 18/61 (29%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P PP G P P G G P+ PG G + G PG
Sbjct: 354 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPK 413
Query: 608 G 606
G
Sbjct: 414 G 414
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/61 (26%), Positives = 18/61 (29%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P PP G P P G G P+ PG G + G PG
Sbjct: 693 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPK 752
Query: 608 G 606
G
Sbjct: 753 G 753
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 28.3 bits (60), Expect = 6.7
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 6/67 (8%)
Frame = -2
Query: 782 PPXXRGXGAGPNPDGXXRAAGHXXVXPRXGX---HYPGXR-PARXXG--GXSXESGHXSA 621
P G P PDG AAG G + PG PA G G + E+G S
Sbjct: 172 PAGEAGPPGPPGPDGKPGAAGSDGEAGAPGTKTTNAPGEPGPAGPPGPPGPNGEAGAGSG 231
Query: 620 PGRTGPS 600
PG GP+
Sbjct: 232 PGPEGPA 238
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/79 (26%), Positives = 25/79 (31%), Gaps = 3/79 (3%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPA---RXXGGXSXESGHXSAP 618
P PP G P G G + G PG A + G + G +AP
Sbjct: 171 PGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPGPSGAPGSQGPPGAPGQPGSGNAP 230
Query: 617 GRTGPSTRHYPRAAALLPG 561
G GP P PG
Sbjct: 231 GPAGPPGPAGPNGQPGHPG 249
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/79 (26%), Positives = 25/79 (31%), Gaps = 3/79 (3%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPA---RXXGGXSXESGHXSAP 618
P PP G P G G + G PG A + G + G +AP
Sbjct: 171 PGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPGPSGAPGPQGPPGAPGQPGSGNAP 230
Query: 617 GRTGPSTRHYPRAAALLPG 561
G GP P PG
Sbjct: 231 GPAGPPGPAGPNGQPGHPG 249
>Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical
protein F08G5.4 protein.
Length = 299
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/66 (28%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSA---P 618
P P G P G A G + G PG A G S G A P
Sbjct: 174 PGPAGPEGDAGAPGDAGAPGAPGAPGQDGQRGTGLPGAPGAPGPQGPSGNPGQDGAAGAP 233
Query: 617 GRTGPS 600
G+ GP+
Sbjct: 234 GQAGPA 239
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/76 (27%), Positives = 24/76 (31%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXHYPGXRPARXXGGXSXESGHXSAPGRT 609
P PP G GP G G + G P P + G PGR
Sbjct: 169 PGPPGHDGPNGGPGQPGQPGPHGPNGHPGKPGSQGPPGPPGH---SDEPKPGQPGQPGRA 225
Query: 608 GPSTRHYPRAAALLPG 561
GP PR A + G
Sbjct: 226 GP---RGPRGVAGIKG 238
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/79 (25%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = -2
Query: 788 PNPPXXRGXGAGPNPDGXXRAAGHXXVXPRXGXH--YPGXRPARXXGGXSXESGHXSAPG 615
P P +G P G + G V + + PG + G S G PG
Sbjct: 190 PGPAGPKGQRGAPGHPGQAGSPGRPGVDAQSQSNPGAPGQAGPQGPPGPSGAPGAPGGPG 249
Query: 614 RTGPSTRHYPRAAALLPGT 558
GP + P A PG+
Sbjct: 250 YPGPPGQKGPSGAPGQPGS 268
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,695,773
Number of Sequences: 27780
Number of extensions: 244243
Number of successful extensions: 1044
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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