Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_I13
         (774 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol dehydro...   226   2e-59
AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical ...   226   2e-59
AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical ...   226   2e-59
AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical ...   221   4e-58
Z66515-1|CAA91347.1|  218|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z81521-4|CAB04229.1|  367|Caenorhabditis elegans Hypothetical pr...    28   8.5  
Z66511-6|CAA91318.1|  343|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol
           dehydrogenase protein.
          Length = 384

 Score =  226 bits (552), Expect = 2e-59
 Identities = 107/172 (62%), Positives = 131/172 (76%), Gaps = 4/172 (2%)
 Frame = -3

Query: 664 LAVXXGXKAAGANRIIGVDINPDKFEVXKKFGVNEFVNPKDYDKP----IQQVLVDLTDG 497
           LAV  G KAAGA +I+G+D+   KFE  K FG  E +NPK  + P     Q  LV+  DG
Sbjct: 208 LAVIMGAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVELPEGKSFQAWLVEQFDG 267

Query: 496 GLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRTWKGTAFG 317
           G +YTFECIGNV TMR ALEA HKGWGVS IIGVA AG+EI+TRPFQLVTGRTWKGTAFG
Sbjct: 268 GFDYTFECIGNVHTMRQALEAAHKGWGVSCIIGVAGAGQEIATRPFQLVTGRTWKGTAFG 327

Query: 316 GYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKSIRAVV 161
           G+KS ESVP+LVD+Y+ KKL +DEF+TH   + +IN AF ++H G+S+R+V+
Sbjct: 328 GWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTAFDVLHKGESLRSVL 379


>AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical
           protein H24K24.3a protein.
          Length = 384

 Score =  226 bits (552), Expect = 2e-59
 Identities = 107/172 (62%), Positives = 131/172 (76%), Gaps = 4/172 (2%)
 Frame = -3

Query: 664 LAVXXGXKAAGANRIIGVDINPDKFEVXKKFGVNEFVNPKDYDKP----IQQVLVDLTDG 497
           LAV  G KAAGA +I+G+D+   KFE  K FG  E +NPK  + P     Q  LV+  DG
Sbjct: 208 LAVIMGAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVELPEGKSFQAWLVEQFDG 267

Query: 496 GLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRTWKGTAFG 317
           G +YTFECIGNV TMR ALEA HKGWGVS IIGVA AG+EI+TRPFQLVTGRTWKGTAFG
Sbjct: 268 GFDYTFECIGNVHTMRQALEAAHKGWGVSCIIGVAGAGQEIATRPFQLVTGRTWKGTAFG 327

Query: 316 GYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKSIRAVV 161
           G+KS ESVP+LVD+Y+ KKL +DEF+TH   + +IN AF ++H G+S+R+V+
Sbjct: 328 GWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTAFDVLHKGESLRSVL 379


>AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical
           protein H24K24.3b protein.
          Length = 386

 Score =  226 bits (552), Expect = 2e-59
 Identities = 107/172 (62%), Positives = 131/172 (76%), Gaps = 4/172 (2%)
 Frame = -3

Query: 664 LAVXXGXKAAGANRIIGVDINPDKFEVXKKFGVNEFVNPKDYDKP----IQQVLVDLTDG 497
           LAV  G KAAGA +I+G+D+   KFE  K FG  E +NPK  + P     Q  LV+  DG
Sbjct: 210 LAVIMGAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVELPEGKSFQAWLVEQFDG 269

Query: 496 GLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRTWKGTAFG 317
           G +YTFECIGNV TMR ALEA HKGWGVS IIGVA AG+EI+TRPFQLVTGRTWKGTAFG
Sbjct: 270 GFDYTFECIGNVHTMRQALEAAHKGWGVSCIIGVAGAGQEIATRPFQLVTGRTWKGTAFG 329

Query: 316 GYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKSIRAVV 161
           G+KS ESVP+LVD+Y+ KKL +DEF+TH   + +IN AF ++H G+S+R+V+
Sbjct: 330 GWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTAFDVLHKGESLRSVL 381


>AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical
           protein Y50D4C.2 protein.
          Length = 554

 Score =  221 bits (540), Expect = 4e-58
 Identities = 104/170 (61%), Positives = 127/170 (74%), Gaps = 4/170 (2%)
 Frame = -3

Query: 664 LAVXXGXKAAGANRIIGVDINPDKFEVXKKFGVNEFVNPKDYDKP----IQQVLVDLTDG 497
           LAV  G KAAGA +I+G+D+   KFE  K FG  E +NPK  + P     Q  LV+  DG
Sbjct: 381 LAVIMGAKAAGAKKIVGIDLIESKFEKAKMFGATECINPKSVELPEGKSFQSWLVEQFDG 440

Query: 496 GLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRTWKGTAFG 317
           G +YTFECIGNV TMR ALEA HKGWGVS IIGVA AG+EI+TRPFQLVTGRTWKGTAFG
Sbjct: 441 GFDYTFECIGNVHTMRQALEAAHKGWGVSCIIGVAGAGQEIATRPFQLVTGRTWKGTAFG 500

Query: 316 GYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKSIRA 167
           G+KS ESVP+LVD+Y+ KKL +DEF+TH   + +IN AF ++  G+ +R+
Sbjct: 501 GWKSVESVPRLVDDYMNKKLLIDEFITHRCNIDDINAAFDVLRKGEGLRS 550


>Z66515-1|CAA91347.1|  218|Caenorhabditis elegans Hypothetical
           protein R53.2 protein.
          Length = 218

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -3

Query: 298 SVPKLVDEYLEKKLPLDEFVTH 233
           S+ KL+D+YL K++ +DE   H
Sbjct: 59  SIGKLIDQYLRKEIDMDEHALH 80


>Z81521-4|CAB04229.1|  367|Caenorhabditis elegans Hypothetical
           protein F32A11.6 protein.
          Length = 367

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = +3

Query: 315 PPKAVPFQVRPVTSWNGRVLISSPAAATPMITDTPHPLWQASSAALMVP 461
           P   +  Q  P+ S +    + SP A     T  PHP W   S++  +P
Sbjct: 246 PMGGLEMQSSPMKSSSDSSHMRSPMAQMNCETTRPHPSWPLESSSFFLP 294


>Z66511-6|CAA91318.1|  343|Caenorhabditis elegans Hypothetical
           protein F07A11.5 protein.
          Length = 343

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -3

Query: 604 NPDKFEVXKKFGVNEFVNPKDYDKPIQQVLVDLTD 500
           N   FE+ +  GV  F+NP   D  + + +++L D
Sbjct: 179 NRRAFEIARSHGVTTFLNPAPGDPNMDKTILELVD 213


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,581,180
Number of Sequences: 27780
Number of extensions: 323160
Number of successful extensions: 864
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)