Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_I12
         (787 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z84574-8|CAE54891.1|  921|Caenorhabditis elegans Hypothetical pr...    28   8.7  
Z84574-7|CAB06544.3|  928|Caenorhabditis elegans Hypothetical pr...    28   8.7  
Z84574-1|CAE54890.1|  577|Caenorhabditis elegans Hypothetical pr...    28   8.7  
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p...    28   8.7  
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ...    28   8.7  
AL022593-4|CAE54889.1|  921|Caenorhabditis elegans Hypothetical ...    28   8.7  
AL022593-3|CAA18635.3|  928|Caenorhabditis elegans Hypothetical ...    28   8.7  

>Z84574-8|CAE54891.1|  921|Caenorhabditis elegans Hypothetical
           protein F33E2.2b protein.
          Length = 921

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 290 PAQGCPKCCSKVSFKCRVGSRHWSRTLGSRSSSRVQSK 403
           P +G P  CS  S    V S  +SR   SRSS+  Q++
Sbjct: 521 PCRGSPYRCSNTSSSSGVQSSPFSRQSSSRSSAGQQTR 558


>Z84574-7|CAB06544.3|  928|Caenorhabditis elegans Hypothetical
           protein F33E2.2a protein.
          Length = 928

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 290 PAQGCPKCCSKVSFKCRVGSRHWSRTLGSRSSSRVQSK 403
           P +G P  CS  S    V S  +SR   SRSS+  Q++
Sbjct: 521 PCRGSPYRCSNTSSSSGVQSSPFSRQSSSRSSAGQQTR 558


>Z84574-1|CAE54890.1|  577|Caenorhabditis elegans Hypothetical
           protein F33E2.2c protein.
          Length = 577

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 290 PAQGCPKCCSKVSFKCRVGSRHWSRTLGSRSSSRVQSK 403
           P +G P  CS  S    V S  +SR   SRSS+  Q++
Sbjct: 521 PCRGSPYRCSNTSSSSGVQSSPFSRQSSSRSSAGQQTR 558


>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
            protein 2, isoform b protein.
          Length = 2027

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
 Frame = +2

Query: 581  NAPHPPRDTSERHAGEYSRQPHDKAYRHLTRASPCSDCTRVS-----RTFSRPYSKN 736
            +A H P  T E    + +R P    YR + RASP S   R       RT S P S++
Sbjct: 1715 SADHNPHQT-EHLLAQDNRSPSSPRYRSMARASPPSPAERYGHPPRYRTESPPSSRS 1770


>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
            activated calciumchannel alpha-1 subunit protein.
          Length = 2027

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
 Frame = +2

Query: 581  NAPHPPRDTSERHAGEYSRQPHDKAYRHLTRASPCSDCTRVS-----RTFSRPYSKN 736
            +A H P  T E    + +R P    YR + RASP S   R       RT S P S++
Sbjct: 1715 SADHNPHQT-EHLLAQDNRSPSSPRYRSMARASPPSPAERYGHPPRYRTESPPSSRS 1770


>AL022593-4|CAE54889.1|  921|Caenorhabditis elegans Hypothetical
           protein F33E2.2b protein.
          Length = 921

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 290 PAQGCPKCCSKVSFKCRVGSRHWSRTLGSRSSSRVQSK 403
           P +G P  CS  S    V S  +SR   SRSS+  Q++
Sbjct: 521 PCRGSPYRCSNTSSSSGVQSSPFSRQSSSRSSAGQQTR 558


>AL022593-3|CAA18635.3|  928|Caenorhabditis elegans Hypothetical
           protein F33E2.2a protein.
          Length = 928

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 290 PAQGCPKCCSKVSFKCRVGSRHWSRTLGSRSSSRVQSK 403
           P +G P  CS  S    V S  +SR   SRSS+  Q++
Sbjct: 521 PCRGSPYRCSNTSSSSGVQSSPFSRQSSSRSSAGQQTR 558


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,385,818
Number of Sequences: 27780
Number of extensions: 307349
Number of successful extensions: 915
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)