Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_I09
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical ... 64 1e-10
U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase ... 58 5e-09
U29376-4|AAM51504.1| 682|Caenorhabditis elegans Protein kinase ... 58 5e-09
U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase ... 58 5e-09
U82936-1|AAB40869.1| 682|Caenorhabditis elegans protein kinase ... 58 9e-09
U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase ... 58 9e-09
U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin prote... 42 3e-04
U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin prote... 42 3e-04
U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin prote... 42 3e-04
U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin prote... 42 3e-04
AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin pro... 42 3e-04
U80033-1|AAM15607.1| 381|Caenorhabditis elegans Synaptotagmin p... 42 6e-04
U55856-5|AAA98023.1| 441|Caenorhabditis elegans Synaptotagmin p... 41 8e-04
U55856-4|AAK68354.1| 443|Caenorhabditis elegans Synaptotagmin p... 41 8e-04
L15302-1|AAA28145.1| 441|Caenorhabditis elegans synaptotagmin I... 41 8e-04
AJ303370-1|CAC33881.1| 155|Caenorhabditis elegans synaptotagmin... 40 0.002
AC024869-3|AAK68605.2| 452|Caenorhabditis elegans Synaptotagmin... 39 0.004
AF016680-1|AAB66163.2| 458|Caenorhabditis elegans Synaptotagmin... 37 0.017
AJ303369-1|CAC33880.1| 153|Caenorhabditis elegans synaptotagmin... 36 0.023
U00051-15|AAZ91344.1| 270|Caenorhabditis elegans Synaptotagmin ... 36 0.040
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 34 0.12
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 34 0.12
AF016688-7|AAB66080.1| 726|Caenorhabditis elegans Hypothetical ... 29 3.4
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 4.5
U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical pr... 29 4.5
U41547-4|AAA83194.3| 376|Caenorhabditis elegans Hypothetical pr... 29 4.5
U41109-12|AAB37043.1| 451|Caenorhabditis elegans Hypothetical p... 29 4.5
AC006729-7|AAF60463.1| 157|Caenorhabditis elegans Hypothetical ... 29 4.5
Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical pr... 28 6.0
U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like ... 28 7.9
U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like ... 28 7.9
AF097737-1|AAD16170.1| 982|Caenorhabditis elegans hunchback-rel... 28 7.9
>AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical
protein F54G2.1a protein.
Length = 1126
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Frame = -2
Query: 728 GILTVRAQFIDD--NLKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTH 555
GIL VRA + + L ++++ A+ ++ DSNGL D +V + ++P+ + V KT+
Sbjct: 963 GILNVRAYYNGNAQTLVLDIIGAKQIIALDSNGLSDPFVVIEIIPKFRYPAVPVVKTKVV 1022
Query: 554 SKNLFPLYDEMFLIPLSPEQRGIADGLLHFVVKDQGYVQ 438
SK+L P++DE F + P A +LHF V D Y++
Sbjct: 1023 SKSLNPIFDETFEFHIPPNPPSTA--MLHFTVMDHDYLR 1059
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -3
Query: 433 SNTFVGEAYLHFSEIPDTPAPIGS-LPQQHLPLSKPNTVDGDAIKALDSRXGRQASSRFH 257
SN F GEA+L +++P A GS L Q +L L +P + D + L+SR + + F
Sbjct: 1060 SNDFAGEAFLELNDVPGFGATGGSTLRQFNLILIQPVSNTKDVLDVLNSRKEDKDAVEFL 1119
Query: 256 QKTKT 242
+ T
Sbjct: 1120 RSIST 1124
>U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase c
protein 2, isoformc protein.
Length = 936
Score = 58.4 bits (135), Expect = 5e-09
Identities = 31/76 (40%), Positives = 43/76 (56%)
Frame = -2
Query: 728 GILTVRAQFIDDNLKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSK 549
G L + A +D L I+++ A+NL+ D NGL D YV+ L+PEDS K KT+T
Sbjct: 302 GRLRIEAHIENDQLTIKILEAKNLIPMDPNGLSDPYVKCKLIPEDSGCK-SKQKTKTLRA 360
Query: 548 NLFPLYDEMFLIPLSP 501
L P ++E F L P
Sbjct: 361 TLNPQWNETFTYKLLP 376
>U29376-4|AAM51504.1| 682|Caenorhabditis elegans Protein kinase c
protein 2, isoformb protein.
Length = 682
Score = 58.4 bits (135), Expect = 5e-09
Identities = 31/76 (40%), Positives = 43/76 (56%)
Frame = -2
Query: 728 GILTVRAQFIDDNLKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSK 549
G L + A +D L I+++ A+NL+ D NGL D YV+ L+PEDS K KT+T
Sbjct: 162 GRLRIEAHIENDQLTIKILEAKNLIPMDPNGLSDPYVKCKLIPEDSGCK-SKQKTKTLRA 220
Query: 548 NLFPLYDEMFLIPLSP 501
L P ++E F L P
Sbjct: 221 TLNPQWNETFTYKLLP 236
>U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase c
protein 2, isoforma protein.
Length = 680
Score = 58.4 bits (135), Expect = 5e-09
Identities = 31/76 (40%), Positives = 43/76 (56%)
Frame = -2
Query: 728 GILTVRAQFIDDNLKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSK 549
G L + A +D L I+++ A+NL+ D NGL D YV+ L+PEDS K KT+T
Sbjct: 162 GRLRIEAHIENDQLTIKILEAKNLIPMDPNGLSDPYVKCKLIPEDSGCK-SKQKTKTLRA 220
Query: 548 NLFPLYDEMFLIPLSP 501
L P ++E F L P
Sbjct: 221 TLNPQWNETFTYKLLP 236
>U82936-1|AAB40869.1| 682|Caenorhabditis elegans protein kinase C2
B isoform protein.
Length = 682
Score = 57.6 bits (133), Expect = 9e-09
Identities = 31/76 (40%), Positives = 43/76 (56%)
Frame = -2
Query: 728 GILTVRAQFIDDNLKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSK 549
G L + A +D L I+++ A+NL+ D NGL D YV+ L+PEDS K KT+T
Sbjct: 162 GRLRIEAHIENDQLTIKILEAKNLIPMDPNGLSDPYVKWKLIPEDSGCK-SKQKTKTLRA 220
Query: 548 NLFPLYDEMFLIPLSP 501
L P ++E F L P
Sbjct: 221 TLNPQWNETFTYKLLP 236
>U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase C2
A isoform protein.
Length = 680
Score = 57.6 bits (133), Expect = 9e-09
Identities = 31/76 (40%), Positives = 43/76 (56%)
Frame = -2
Query: 728 GILTVRAQFIDDNLKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSK 549
G L + A +D L I+++ A+NL+ D NGL D YV+ L+PEDS K KT+T
Sbjct: 162 GRLRIEAHIENDQLTIKILEAKNLIPMDPNGLSDPYVKWKLIPEDSGCK-SKQKTKTLRA 220
Query: 548 NLFPLYDEMFLIPLSP 501
L P ++E F L P
Sbjct: 221 TLNPQWNETFTYKLLP 236
>U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin protein
1, isoform a protein.
Length = 953
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = -2
Query: 722 LTVRAQFIDDNLKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNL 543
LT+ D LK+ ++ A+NL DSNG D YV+ LLP ++ A K ++T K L
Sbjct: 680 LTLTYHSADKKLKMHLIRAKNLKAMDSNGFSDPYVKFHLLPGNTKA--TKLTSKTIEKTL 737
Query: 542 FPLYDE 525
P ++E
Sbjct: 738 NPEWNE 743
>U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin protein
1, isoform b protein.
Length = 1028
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = -2
Query: 722 LTVRAQFIDDNLKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNL 543
LT+ D LK+ ++ A+NL DSNG D YV+ LLP ++ A K ++T K L
Sbjct: 755 LTLTYHSADKKLKMHLIRAKNLKAMDSNGFSDPYVKFHLLPGNTKA--TKLTSKTIEKTL 812
Query: 542 FPLYDE 525
P ++E
Sbjct: 813 NPEWNE 818
>U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin protein
1, isoform c protein.
Length = 962
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = -2
Query: 722 LTVRAQFIDDNLKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNL 543
LT+ D LK+ ++ A+NL DSNG D YV+ LLP ++ A K ++T K L
Sbjct: 689 LTLTYHSADKKLKMHLIRAKNLKAMDSNGFSDPYVKFHLLPGNTKA--TKLTSKTIEKTL 746
Query: 542 FPLYDE 525
P ++E
Sbjct: 747 NPEWNE 752
>U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin protein 1,
isoform d protein.
Length = 1106
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = -2
Query: 722 LTVRAQFIDDNLKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNL 543
LT+ D LK+ ++ A+NL DSNG D YV+ LLP ++ A K ++T K L
Sbjct: 833 LTLTYHSADKKLKMHLIRAKNLKAMDSNGFSDPYVKFHLLPGNTKA--TKLTSKTIEKTL 890
Query: 542 FPLYDE 525
P ++E
Sbjct: 891 NPEWNE 896
>AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin
protein.
Length = 953
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = -2
Query: 722 LTVRAQFIDDNLKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNL 543
LT+ D LK+ ++ A+NL DSNG D YV+ LLP ++ A K ++T K L
Sbjct: 680 LTLTYHSADKKLKMHLIRAKNLKAMDSNGFSDPYVKFHLLPGNTKA--TKLTSKTIEKTL 737
Query: 542 FPLYDE 525
P ++E
Sbjct: 738 NPEWNE 743
>U80033-1|AAM15607.1| 381|Caenorhabditis elegans Synaptotagmin
protein 4 protein.
Length = 381
Score = 41.5 bits (93), Expect = 6e-04
Identities = 27/77 (35%), Positives = 41/77 (53%)
Frame = -2
Query: 722 LTVRAQFIDDNLKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNL 543
LT +A F +NL + V+ AR L + G D +V++ L E S +VK +T L
Sbjct: 257 LTYQAAF--NNLTVVVLKARGLGGRNDAGTADPFVKLYLRKE-SGERIVKKRTHVRRSTL 313
Query: 542 FPLYDEMFLIPLSPEQR 492
P+Y+E F+ L P+ R
Sbjct: 314 NPVYNESFVFEL-PDDR 329
Score = 34.3 bits (75), Expect = 0.091
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = -2
Query: 689 LKIEVMNARNL----VXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNLFPLYDEM 522
L + ++N RNL V D L D YV++ LLPE + KT+ P+Y+E
Sbjct: 128 LLVSIINCRNLCEMVVSRDGQCLLDPYVKLQLLPEREH----RVKTRIVRSTTSPVYEEQ 183
Query: 521 F-LIPLSPEQRGIADGLLHFVV 459
F + ++ EQ A LHF V
Sbjct: 184 FAMYGVTHEQVNFA--TLHFQV 203
>U55856-5|AAA98023.1| 441|Caenorhabditis elegans Synaptotagmin
protein 1, isoform a protein.
Length = 441
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = -2
Query: 704 FIDDNLKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNLFPLYDE 525
F L + V+ A +L D +G D YV++ LLPE K +T+ H K L P+++E
Sbjct: 171 FQQGQLTVTVIQAEDLPGMDMSGTSDPYVKLYLLPEKK----KKVETKVHRKTLNPVFNE 226
Query: 524 MFLIPLS 504
F+ ++
Sbjct: 227 TFIFKVA 233
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = -2
Query: 689 LKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNLFPLYDEMFLIP 510
L + ++ A+NL D GL D YV++ L+ + K KT L P Y+E F
Sbjct: 309 LTVVILEAKNLKKMDVGGLSDPYVKIVLM--QGGKRLKKKKTSIKKCTLNPYYNESFSFE 366
Query: 509 LSPEQ 495
+ EQ
Sbjct: 367 VPFEQ 371
>U55856-4|AAK68354.1| 443|Caenorhabditis elegans Synaptotagmin
protein 1, isoform b protein.
Length = 443
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = -2
Query: 704 FIDDNLKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNLFPLYDE 525
F L + V+ A +L D +G D YV++ LLPE K +T+ H K L P+++E
Sbjct: 171 FQQGQLTVTVIQAEDLPGMDMSGTSDPYVKLYLLPEKK----KKVETKVHRKTLNPVFNE 226
Query: 524 MFLIPLS 504
F+ ++
Sbjct: 227 TFIFKVA 233
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -2
Query: 689 LKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNLFPLYDEMFLIP 510
L + ++ A+NL D GL D YV++ + ED + K KT K L P ++E F+
Sbjct: 309 LTVVILEAKNLKKMDVGGLSDPYVKLEMFGEDR-KRLKKKKTNIKRKTLNPYFNESFVFD 367
Query: 509 LSP 501
P
Sbjct: 368 KLP 370
>L15302-1|AAA28145.1| 441|Caenorhabditis elegans synaptotagmin I
protein.
Length = 441
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = -2
Query: 704 FIDDNLKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNLFPLYDE 525
F L + V+ A +L D +G D YV++ LLPE K +T+ H K L P+++E
Sbjct: 171 FQQGQLTVTVIQAEDLPGMDMSGTSDPYVKLYLLPEKK----KKVETKVHRKTLNPVFNE 226
Query: 524 MFLIPLS 504
F+ ++
Sbjct: 227 TFIFKVA 233
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = -2
Query: 689 LKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNLFPLYDEMFLIP 510
L + ++ A+NL D GL D YV++ L+ + K KT L P Y+E F
Sbjct: 309 LTVVILEAKNLKKMDVGGLSDPYVKIVLM--QGGKRLKKKKTSIKKCTLNPYYNESFSFE 366
Query: 509 LSPEQ 495
+ EQ
Sbjct: 367 VPFEQ 371
>AJ303370-1|CAC33881.1| 155|Caenorhabditis elegans synaptotagmin 1
protein.
Length = 155
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -2
Query: 689 LKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNLFPLYDEMFLIP 510
L + ++ A+NL D GL D YV++ + ED + K KT K L P ++E F+
Sbjct: 28 LTVVILEAKNLKKMDVGGLSDPYVKLEMFGEDR-KRLKKKKTNIKRKTLNPYFNESFVFD 86
Query: 509 LSP 501
P
Sbjct: 87 KLP 89
>AC024869-3|AAK68605.2| 452|Caenorhabditis elegans Synaptotagmin
protein 3 protein.
Length = 452
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/91 (29%), Positives = 40/91 (43%)
Frame = -2
Query: 695 DNLKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNLFPLYDEMFL 516
+ L + VM +NL D GL D YV++ L+ + K KT K L P Y+E F
Sbjct: 158 NKLSVVVMECKNLKKMDVLGLSDPYVKIYLMM--GTKRLEKKKTTIKMKTLNPYYNESFS 215
Query: 515 IPLSPEQRGIADGLLHFVVKDQGYVQCEQHV 423
++ E+ LH V D V + +
Sbjct: 216 FDVTSEKMQRVH--LHVTVSDYDRVGSNERI 244
Score = 34.3 bits (75), Expect = 0.091
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = -2
Query: 704 FIDDNLKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNLFPLYDE 525
F ++L + ++ A L D G D YV++ LLP+ K +T+ K+L P+++E
Sbjct: 27 FDKNSLTVVIIQAEELPAMDLGGTSDPYVKLFLLPDKK----KKLQTKVQRKSLNPVFNE 82
Query: 524 MF 519
F
Sbjct: 83 SF 84
>AF016680-1|AAB66163.2| 458|Caenorhabditis elegans Synaptotagmin
protein 5 protein.
Length = 458
Score = 36.7 bits (81), Expect = 0.017
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = -2
Query: 728 GILT--VRAQFIDDNLKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTH 555
G LT +R FI L + V+ A NL D D YV++ LLPE KT+
Sbjct: 170 GTLTFALRYDFIHRVLMLHVIRANNLPVEDKGVTVDPYVKMYLLPE----RRGHCKTRIC 225
Query: 554 SKNLFPLYDEMFLIPLSPEQRGIADGLLHFVVKD 453
K P ++EMF +S +A+ +L F V D
Sbjct: 226 KKTNDPEFNEMFSFDVS--FNNLANRMLQFTVYD 257
>AJ303369-1|CAC33880.1| 153|Caenorhabditis elegans synaptotagmin 1
protein.
Length = 153
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = -2
Query: 689 LKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNLFPLYDEMFLIP 510
L + ++ A+NL D GL D YV++ L+ + K KT L P Y+E F
Sbjct: 28 LTVVILEAKNLKKMDVGGLSDPYVKIVLM--QGGKRLKKKKTSIKKCTLNPYYNESFSFE 85
Query: 509 LSPEQ 495
+ EQ
Sbjct: 86 VPFEQ 90
>U00051-15|AAZ91344.1| 270|Caenorhabditis elegans Synaptotagmin
protein 2 protein.
Length = 270
Score = 35.5 bits (78), Expect = 0.040
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -2
Query: 683 IEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNLFPLYDEMFLIPLS 504
+ +M ARNL D G D YV++ L + K KT K L P Y+E F +
Sbjct: 136 LTIMEARNLKKMDVGGSSDPYVKIYL--HHGRKLLSKKKTSRKYKTLNPYYNESFQFKIE 193
Query: 503 P 501
P
Sbjct: 194 P 194
Score = 35.1 bits (77), Expect = 0.052
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = -2
Query: 689 LKIEVMNARNLVXTDSNGLCDSYVRVALLPEDSFANVVKPKTQTHSKNLFPLYDEMF 519
L + +++A +L D NG+ D YV+V +LPE K +T+ L P Y+E F
Sbjct: 1 LSVTIVSASDLPAMDRNGMSDPYVKVYVLPE----RKQKFETRIIRNTLNPTYNETF 53
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = -2
Query: 737 PEMGILTVRAQFIDDNLKIEVMNARNLVXTDSNGLCDS-YVRVALLPEDSFANVVKPKTQ 561
P +G + + + +E++ A+NLV +C + YV+V L+ + + K KT
Sbjct: 1416 PVLGEIQIALMAGRSGIDVEIIKAKNLVVKPGVKVCPAPYVKVYLM--EGKQCIAKAKTN 1473
Query: 560 THSKNLFPLYDEMFLIPLSPEQR 492
+K PL+ + + SP+++
Sbjct: 1474 AATKTTSPLFQQHLIFNDSPKKK 1496
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = -2
Query: 737 PEMGILTVRAQFIDDNLKIEVMNARNLVXTDSNGLCDS-YVRVALLPEDSFANVVKPKTQ 561
P +G + + + +E++ A+NLV +C + YV+V L+ + + K KT
Sbjct: 1416 PVLGEIQIALMAGRSGIDVEIIKAKNLVVKPGVKVCPAPYVKVYLM--EGKQCIAKAKTN 1473
Query: 560 THSKNLFPLYDEMFLIPLSPEQR 492
+K PL+ + + SP+++
Sbjct: 1474 AATKTTSPLFQQHLIFNDSPKKK 1496
>AF016688-7|AAB66080.1| 726|Caenorhabditis elegans Hypothetical
protein F18A12.1 protein.
Length = 726
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 190 QKRILLT*RKELLARHFLSLFFDEISSLPVSLXASPK 300
+K++L+T K + H SLFFDE +L L ++PK
Sbjct: 325 RKKLLVTKVKPRMVAHKHSLFFDEKMNLEKLLKSTPK 361
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 382 CPVSR*SVDTPPPQTCCSH*TYPWSLTTKCNSPSAMPRCSG 504
CP+ + PPP CS P ++ C P +PRCSG
Sbjct: 258 CPMP---IPCPPPPPACSC-PPPVTMYQPCMVPQYVPRCSG 294
>U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical
protein B0507.6 protein.
Length = 857
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/71 (21%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = -2
Query: 695 DNLKIEVMNARNLVXTDSNGLCDSYVRVA----LLPEDSFANVVKPKTQTHSKNLFPLYD 528
+ L++E+ N N + DS+ ++ + P+ SF V + +K + +YD
Sbjct: 579 NELELEITNLLGFTMMTYNAMEDSFAKLKELERMFPDASFVRVFQKCIADTAKIILEIYD 638
Query: 527 EMFLIPLSPEQ 495
++ L+P +
Sbjct: 639 SFGVLSLNPNE 649
>U41547-4|AAA83194.3| 376|Caenorhabditis elegans Hypothetical
protein F22A3.1 protein.
Length = 376
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1
Query: 513 SSESGAAWHRRRTVAFRCQGPRICSV*ATRLWG 415
SSE GA W + F Q PR CS+ L G
Sbjct: 88 SSEHGARWINEMCMQFNLQPPRNCSITGIDLLG 120
>U41109-12|AAB37043.1| 451|Caenorhabditis elegans Hypothetical
protein F52E1.10 protein.
Length = 451
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 99 NSYRXCDHFLYRSTTRKCGLRLSYTQLIFMTETNTIN 209
N Y H LY +TRKCG ++ Y Q+IF T N
Sbjct: 200 NGYDSLTHALY--STRKCGFQIQY-QIIFCMWLLTFN 233
>AC006729-7|AAF60463.1| 157|Caenorhabditis elegans Hypothetical
protein Y24D9A.6 protein.
Length = 157
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 74 FPRCYSYSQ*LQGL*PFSISIYHSQVRAPTKLHTTNIYDRN 196
F C +S ++ + FSISIY S V A T + + N RN
Sbjct: 58 FGNCRKFSIFIKSICQFSISIYTSSVWAKTNVLSKNRVKRN 98
>Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical
protein T12G3.2c protein.
Length = 888
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -3
Query: 379 PAPIGSLPQQHLPLSKPNTVDGDAIKALDSRXGRQASSRFHQKTKTENAEQAILF 215
PAPIG++P L KP T + A +S A++ H+K+ + E I++
Sbjct: 341 PAPIGNVPSAALLAMKPTTGTKRSNAASNS---DSANNTAHKKSDVNSKESVIIY 392
>Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical
protein T12G3.2b protein.
Length = 912
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -3
Query: 379 PAPIGSLPQQHLPLSKPNTVDGDAIKALDSRXGRQASSRFHQKTKTENAEQAILF 215
PAPIG++P L KP T + A +S A++ H+K+ + E I++
Sbjct: 341 PAPIGNVPSAALLAMKPTTGTKRSNAASNS---DSANNTAHKKSDVNSKESVIIY 392
>Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical
protein T12G3.2a protein.
Length = 928
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -3
Query: 379 PAPIGSLPQQHLPLSKPNTVDGDAIKALDSRXGRQASSRFHQKTKTENAEQAILF 215
PAPIG++P L KP T + A +S A++ H+K+ + E I++
Sbjct: 341 PAPIGNVPSAALLAMKPTTGTKRSNAASNS---DSANNTAHKKSDVNSKESVIIY 392
>U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform b protein.
Length = 960
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 338 IQTQHCRWRCDQGFGLAXRETGKLEISSKNKD-RKCRA 228
I HC DQG A TG +ISS +++ +KC++
Sbjct: 782 ITESHCYEEMDQGSDSAVSPTGSSQISSGDEETKKCKS 819
>U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform a protein.
Length = 982
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 338 IQTQHCRWRCDQGFGLAXRETGKLEISSKNKD-RKCRA 228
I HC DQG A TG +ISS +++ +KC++
Sbjct: 804 ITESHCYEEMDQGSDSAVSPTGSSQISSGDEETKKCKS 841
>AF097737-1|AAD16170.1| 982|Caenorhabditis elegans
hunchback-related protein protein.
Length = 982
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 338 IQTQHCRWRCDQGFGLAXRETGKLEISSKNKD-RKCRA 228
I HC DQG A TG +ISS +++ +KC++
Sbjct: 804 ITESHCYEEMDQGSDSAVSPTGSSQISSGDEETKKCKS 841
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,652,949
Number of Sequences: 27780
Number of extensions: 401662
Number of successful extensions: 1082
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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