Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_I04
         (773 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084159-8|AAK39361.2|  655|Caenorhabditis elegans Hypothetical ...    28   6.4  
AF098996-2|AAC68711.3|  431|Caenorhabditis elegans Hypothetical ...    28   8.5  

>AC084159-8|AAK39361.2|  655|Caenorhabditis elegans Hypothetical
           protein Y73B3A.3 protein.
          Length = 655

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = +1

Query: 427 LADSSSGAKRIFNTHFLDSESERPDSLSETLNAFLT-ENCNYHYSNVSLXTGYRLDAISA 603
           L+D    +  IFN   L +    PDSL  TL + L  E  N     V+    Y  +A  A
Sbjct: 292 LSDEQRSSDAIFNVPILVASGLAPDSLRITLESLLNQEGLNTQMVLVTYDKEYSENADLA 351

Query: 604 RSFFFRVYGLVS 639
             F  + + L+S
Sbjct: 352 ALFHVKTHLLLS 363


>AF098996-2|AAC68711.3|  431|Caenorhabditis elegans Hypothetical
           protein T11F1.6 protein.
          Length = 431

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = +1

Query: 415 ETFSLADSSSGAKRIFNTHFLDSESERPDSLSETLN-AFLTENCNYHYSNVSLXTGYRLD 591
           E     D+    K I   + LD  S   +SL +  N + L E C Y Y NV +  G   +
Sbjct: 311 EMIGFLDAQVYFKNIHANYCLDGVSFS-ESLCQFFNMSSLPEKCTYIYGNVEINAGDE-E 368

Query: 592 AISARSFFFRVYGLVS 639
            +   S+   +YG +S
Sbjct: 369 YVYKLSYVSDIYGSLS 384


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,238,945
Number of Sequences: 27780
Number of extensions: 295621
Number of successful extensions: 585
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)