Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_I02
         (749 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0417 - 23312875-23312925,23314136-23314246,23315073-23315537     31   1.3  
03_05_0917 + 28774068-28774128,28774293-28774392,28774413-287750...    28   6.9  

>11_06_0417 - 23312875-23312925,23314136-23314246,23315073-23315537
          Length = 208

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +1

Query: 463 EVYLPVFVFGDGTTSANDASAHIINIALVTYIDMLLTDSIRVNVSMWAD 609
           E +  VF+      + +  +AH+ + ALV Y   + + S+ ++  +W D
Sbjct: 19  EAFSRVFLVAQAVCAVHVVNAHVCSFALVLYFARVSSSSLSLSALLWLD 67


>03_05_0917 +
           28774068-28774128,28774293-28774392,28774413-28775056,
           28775567-28775727,28776362-28776430
          Length = 344

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 661 LFSNCRIVWRMLCWFERCLPTWK 593
           LF NC + +R+LC   R  P+WK
Sbjct: 195 LFQNCSL-YRVLCQVRRASPSWK 216


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,713,671
Number of Sequences: 37544
Number of extensions: 300542
Number of successful extensions: 716
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)